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2016

Aydogan, Vahap and Belting, Heinz-Georg and Affolter, Markus. (2016) Mapping the molecular steps of secretory-lysosome-driven tracheal tube fusion. Nature Cell Biology, 18 (7). pp. 720-722.

Betz, Charles and Lenard, Anna and Belting, Heinz-Georg and Affolter, Markus. (2016) Cell behaviors and dynamics during angiogenesis. Development, 143 (13). pp. 2249-2260.

Matsuda, Shinya and Harmansa, Stefan and Affolter, Markus. (2016) BMP morphogen gradients in flies. Cytokine & Growth Factor Reviews, 27. pp. 119-127.

Affolter, Markus. (2016) Seeing is Believing, or How GFP Changed My Approach to Science. Current topics in developmental biology, 116. pp. 1-16.

Bieli, D. and Alborelli, I. and Harmansa, S. and Matsuda, S. and Caussinus, E. and Affolter, Markus. (2016) Development and Application of Functionalized Protein Binders in Multicellular Organisms. International review of cytology, 325. pp. 181-213.

2015

Ittig, Simon Josef and Schmutz, Christoph and Kasper, Christoph Alexander and Amstutz, Marlise and Schmidt, Alexander and Sauteur, Loïc and Vigano, M. Alessandra and Low, Shyan Huey and Affolter, Markus and Cornelis, Guy R. and Nigg, Erich A. and Arrieumerlou, Cécile. (2015) A bacterial type III secretion-based protein delivery tool for broad applications in cell biology. The Journal of cell biology, 211 (4). pp. 913-931.

Harmansa, Stefan and Hamaratoglu, Fisun and Affolter, Markus and Caussinus, Emmanuel. (2015) Dpp spreading is required for medial but not for lateral wing disc growth. Nature, 527 (7578). pp. 317-322.

Bieli, Dimitri and Kanca, Oguz and Requena, David and Hamaratoglu, Fisun and Gohl, Daryl and Schedl, Paul and Affolter, Markus and Slattery, Matthew and Müller, Martin and Estella, Carlos. (2015) Establishment of a Developmental Compartment Requires Interactions between Three Synergistic Cis-regulatory Modules. PLoS genetics, 11 (10). e1005376.

Phng, Li-Kun and Gebala, Véronique and Bentley, Katie and Philippides, Andrew and Wacker, Andrin and Mathivet, Thomas and Sauteur, Loïc and Stanchi, Fabio and Belting, Heinz-Georg and Affolter, Markus and Gerhardt, Holger. (2015) Formin-mediated actin polymerization at endothelial junctions is required for vessel lumen formation and stabilization. Developmental cell, Vol. 32, H. 1. S. 123-132.

Lenard, Anna and Daetwyler, Stephan and Betz, Charles and Ellertsdottir, Elin and Belting, Heinz-Georg and Huisken, Jan and Affolter, Markus. (2015) Endothelial Cell Self-fusion during Vascular Pruning. PLoS biology, Vol. 13, H. 4 , e1002126.

Denes, Alexandru Stefan and Kanca, Oguz and Affolter, Markus. (2015) A cellular process that includes asymmetric cytokinesis remodels the dorsal tracheal branches in Drosophila larvae. Development, Vol. 142, H. 10. S. 1794-1805.

Bieli, Dimitri and Kanca, Oguz and Gohl, Daryl and Denes, Alexandru and Schedl, Paul and Affolter, Markus and Müller, Martin. (2015) The drosophila melanogaster mutants apblot and apXasta affect an essential apterous wing enhancer. G3 : Genes, Genomes, Genetics, Vol. 5, no. 6. S. 1129-1143.

Affolter, Markus and Nigg, Erich. (2015) In memoriam - Walter J. Gehring. Chromosoma, Vol. 124, H. 3. S. 291.

Affolter, Markus. (2015) Nachruf auf Walter J. Gehring. Zoologie: Mitteilungen der Deutschen Zoologischen Gesellschaft, 2015. S. 73-80.

Aydogan, Vahap and Lenard, Anna and Denes, Alexandru Stefan and Sauteur, Loïc and Belting, Heinz-Georg and Affolter, Markus. (2015) Endothelial cell division in angiogenic sprouts of differing cellular architecture. Biology open, 4. pp. 1259-1269.

2014

Kanca, Oguz and Caussinus, Emmanuel and Denes, Alexandru S. and Percival-Smith, Anthony and Affolter, Markus. (2014) Raeppli: a whole-tissue labeling tool for live imaging of Drosophila development. Development, Vol. 141, H. 2. S. 472-480.

Hultin, Sara and Zheng, Yujuan and Mojallal, Mahdi and Vertuani, Simona and Gentili, Christian and Balland, Martial and Milloud, Rachel and Belting, Heinz-Georg and Affolter, Markus and Helker, Christian S. M. and Adams, Ralf H. and Herzog, Wiebke and Uhlen, Per and Majumdar, Arindam and Holmgren, Lars. (2014) AmotL2 Links VE-cadherin to Contractile Actin Fibres Necessary for Aortic Lumen Expansion. Nature communications, Vol. 5 , Article Nr. 3743.

Kanca, Oguz and Ochoa-Espinosa, Amanda and Affolter, Markus. (2014) IV. Tools and Methods for Studying Cell Migration and Cell Rearrangement in Tissue and Organ Development. Methods, Vol. 68, no. 1. S. 228-232.

Hamaratoglu, Fisun and Affolter, Markus and Pyrowolakis, George. (2014) Dpp/BMP signaling in flies: from molecules to biology. Seminars in cell & developmental biology, Vol. 32 , p. 128–136.

Santos, M. Emília and Braasch, Ingo and Boileau, Nicolas and Meyer, Britta S. and Sauteur, Loïc and Böhne, Astrid and Belting, Heinz-Georg and Affolter, Markus and Salzburger, Walter. (2014) The evolution of cichlid fish egg-spots is linked with a cis-regulatory change. Nature communications, Vol. 5 , Article Nr. 5149. S. 5149.

Sauteur, Loïc and Krudewig, Alice and Herwig, Lukas and Ehrenfeuchter, Nikolaus and Lenard, Anna and Affolter, Markus and Belting, Heinz-Georg. (2014) Cdh5/VE-cadherin Promotes Endothelial Cell Interface Elongation via Cortical Actin Polymerization during Angiogenic Sprouting. Cell reports, Vol. 9, H. 2. S. 504-513.

Brauchle, Michael and Hansen, Simon and Caussinus, Emmanuel and Lenard, Anna and Ochoa-Espinosa, Amanda and Scholz, Oliver and Sprecher, Simon G. and Plückthun, Andreas and Affolter, Markus. (2014) Protein interference applications in cellular and developmental biology using DARPins that recognize GFP and mCherry. Biology open, 3 , S. 1252–1261.

De Smet, Frederik and Tembuyser, Bieke and Lenard, Anna and Claes, Filip and Zhang, Jie and Michielsen, Christof and Van Schepdael, Ann and Herbert, Jean-Marc and Bono, Françoise and Affolter, Markus and Dewerchin, Mieke and Carmeliet, Peter. (2014) Fibroblast Growth Factor Signaling Affects Vascular Outgrowth and Is Required for the Maintenance of Blood Vessel Integrity. Chemistry & biology, Vol. 21, H. 10. S. 1310-1317.

Affolter, Markus and Wüthrich, Kurt. (2014) Walter Jakob Gehring: a Master of Developmental Biology. Proceedings of the National Academy of Sciences of the United States of America, Vol. 111, H. 5. S. 12574-12575.

2013

Hayashi, Makoto and Majumdar, Arindam and Li, Xiujuan and Adler, Jeremy and Sun, Zuyue and Vertuani, Simona and Hellberg, Carina and Mellberg, Sofie and Koch, Sina and Dimberg, Anna and Young Koh, Gou and Dejana, Elisabetta and Belting, Heinz-Georg and Affolter, Markus and Thurston, Gavin and Holmgren, Lars and Vestweber, Dietmar and Claesson-Welsh, Lena. (2013) VE-PTP regulates VEGFR2 activity in stalk cells to establish endothelial cell polarity and lumen formation. Nature communications, Vol. 4 , Article Nr. 1672. S. 1672.

Helker, Christian S. M. and Schuermann, Annika and Karpanen, Terhi and Zeuschner, Dagmar and Belting, H.-G. and Affolter, Markus and Schulte-Merker, Stefan and Herzog, Wiebke. (2013) The Zebrafish Common Cardinal Veins Develop by a Novel Mechanism: Lumen Ensheathment. Development, Vol. 140, H. 13. S. 2776-2786.

Siekmann, Arndt F. and Affolter, Markus and Belting, Heinz-Georg. (2013) The Tip Cell Concept Ten Years After : New Players Tune in for a Common Theme. Experimental cell research, Vol. 319, H. 9. S. 1255-1263.

Ochoa-Espinosa, Amanda and Affolter, Markus. (2013) Branching Morphogenesis : From Cells to Organs and Back. In: Mammalian Development: Networks, Switches, and Morphogenetic Processes. Cold Spring Harbor, S. 82-94.

Lenard, Anna and Ellertsdottir, Elin and Herwig, Lukas and Krudewig, Alice and Sauteur, Loïc and Belting, Heinz-Georg and Affolter, Markus. (2013) In Vivo Analysis Reveals a Highly Stereotypic Morphogenetic Pathway of Vascular Anastomosis. Developmental cell, Vol. 25, H. 5. S. 492-506.

Lenard, Anna and Affolter, Markus. (2013) Tugging organs into place. Developmental cell, Vol. 27, H. 3. S. 243-244.

Kochhan, Eva and Lenard, Anna and Ellertsdottir, Elin and Herwig, Lukas and Affolter, Markus and Belting, Heinz-Georg and Siekmann, Arndt F.. (2013) Blood Flow Changes Coincide with Cellular Rearrangements during Blood Vessel Pruning in Zebrafish Embryos. PLoS one, Vol. 8, H. 10 , e75060.

Caussinus, Emmanuel and Kanca, Oguz and Affolter, Markus. (2013) Protein knockouts in living eukaryotes using deGradFP and green fluorescent protein fusion targets. Current protocols in protein science, Suppl. 73, unit 30.2 , p. 30.2.1.-30.2.13.

2012

Caussinus, Emmanuel and Kanca, Oguz and Affolter, Markus. (2012) Fluorescent fusion protein knockout mediated by anti-GFP nanobody. Nature structural & molecular biology, Vol. 19, no. 1 , S. 117–121.

Ellertsdottir, Elin and Berthold, Peter R. and Bouzaffour, Mohamed and Dufourcq, Pascale and Trayer, Vincent and Gauron, Carole and Vriz, Sophie and Affolter, Markus and Rampon, Christine. (2012) Developmental Role of Zebrafish Protease-Activated Receptor 1 (PAR1) in the Cardio-Vascular System. PLoS one, Vol. 7, H. 7 , e42131.

Wang, Shuoshuo and Meyer, Heiko and Ochoa-Espinosa, Amanda and Buchwald, Ulf and Onel, Susanne and Altenhein, Benjamin and J. Heinisch, Jürgen and Affolter, Markus and Paululat, Achim. (2012) GBF1 (Gartenzwerg)-dependent secretion is required for Drosophila tubulogenesis. Journal of cell science, Vol. 125, H. 2. S. 461-472.

Ochoa-Espinosa, A. and Baer, M. and Affolter, M.. (2012) Tubulogenesis: Src42A Goes to Great Lengths in Tube Elongation. Current biology, Vol. 22, H. 11 , R446-R449.

Baer, Magdalena M. and Palm, Wilhelm and Eaton, Suzanne and Leptin, Maria and Affolter, Markus. (2012) Microsomal triacylglycerol transfer protein (MTP) is required cell autonomously to expand tracheal lumen in Drosophila. Journal of cell science, Vol. 125, H. 24. S. 6038-6048.

Ochoa-Espinosa, Amanda and Affolter, Markus. (2012) Branching morphogenesis : from cells to organs and back. Cold Spring Harbor perspectives in biology, Vol. 4, H. 10 , a008243.

2011

Affolter, M. and Basler, K.. (2011) Cytonemes Show Their Colors. Science, Vol. 332, H. 6027. S. 312-313.

Vermot, Julien and Affolter, Markus. (2011) Modeling new conceptual interpretations of development. Development, Vol. 138, H. 19. S. 4111-4115.

Herwig, Lukas and Blum, Yannick and Krudewig, Alice and Ellertsdottir, Elin and Lenard, Anna and Belting, Heinz-Georg and Affolter, Markus. (2011) Distinct cellular mechanisms of blood vessel fusion in the zebrafish embryo. Current biology, Vol. 21, H. 22. S. 1942-1948.

Schulz, Joachim G. and Ceulemans, Helga and Caussinus, Emmanuel and Baietti, Maria F. and Affolter, Markus and Hassan, Bassem A. and David, Guido. (2011) Drosophila syndecan regulates tracheal cell migration by stabilizing Robo levels. EMBO reports, Vol. 12, H. 10. S. 1039-1046.

Schwank, G. and Dalessi, S. and Yang, S. -F. and Yagi, R. and Morton de Lachapelle, A. and Affolter, M. and Bergmann, S. and Basler, K.. (2011) Formation of long range Dpp morphogen gradient. PLoS biology, Vol. 9, H. 7 , E1001111.

Zygmunt, T. and Blondelle, J. and Singh, M. K. and McCrone Flaherty, K. and Casey Means, P. and Herwig, L. and Krudewig, A. and Belting, H. -G. and Affolter, M. and Epstein, J. A. and Torres-Vazquez, J.. (2011) Semaphorin-PlexinD1 Signaling Limits Angiogenic potential via the VEGF Decoy Receptor sFlt1. Developmental cell, Vol. 21, H. 2. S. 301-314.

Vuilleumier, Robin and Affolter, Markus and Pyrowolakis, George. (2011) Pentagone: patrolling BMP morphogen signaling. Fly, Vol. 5, H. 3. S. 210-214.

Totong, Ronald and Schell, Thomas and Lescroart, Fabienne and Ryckebüsch, Lucile and Lin, Yi-Fan and Zygmunt, Tomasz and Herwig, Lukas and Krudewig, Alice and Gershoony, Dafna and Belting, Heinz-Georg and Affolter, Markus and Torres-Vázquez, Jesús and Yelon, Deborah. (2011) The novel transmembrane protein Tmem2 is essential for coordination of myocardial and endocardial morphogenesis. Development, Vol. 138, H. 19. S. 4199-4205.

Gutnick, Amos and Blechman, Janna and Kaslin, Jan and Herwig, Lukas and Belting, Heinz-Georg and Affolter, Markus and Bonkowsky, Joshua L. and Levkowitz, Gil. (2011) The hypothalamic neuropeptide oxytocin is required for formation of the neurovascular interface of the pituitary. Developmental cell, Vol. 21, H. 4. S. 642-654.

Hamaratoglu, Fisun and Morton de Lachapelle, Aitana and Pyrowolakis, George and Bergmann, Sven and Affolter, Markus. (2011) Dpp signaling activity requires Pentagone to scale with tissue size in the growing Drosophila wing imaginal disc. PLoS biology, Vol. 9, H. 10 , e1001182.

2010

Weiss, A. and Charbonnier, E. and Ellertsdottir, E. and Tsirigos, A. and Wolf, C. and Schuh, R. and Pyrowolakis, G. and Affolter, M.. (2010) A conserved activation element in BMP signaling during Drosophila development. Nature structural & molecular biology, Vol. 17, no. 1. S. 69-76.

Ninov, N. and Menezes-Cabral, S. and Prat-Rojo, C. and Manjón, C. and Weiss, A. and Pyrowolakis, G. and Affolter, M. and Martín-Blanco, E.. (2010) Dpp Signaling Directs Cell Motility and Invasiveness during Epithelial Morphogenesis. Current biology, Vol. 20. S. 513-520.

Ellertsdottir, E. and Lenard, A. and Blum, Y. and Krudewig, A. and Herwig, L. and Affolter, M. and Belting, H. G.. (2010) Vascular Morphogenesis in the Zebrafish Embryo. Developmental biology, Vol. 341, H. 1. S. 56-65.

Fernandes, I. and Chanut-Delande, H. and Ferrer, P. and Latapie, Y. and Waltzer, L. and Affolter, M. and Payre, F. and Plaza, S.. (2010) Zona Pellucida Domain Proteins Remodel the Apical Compartment for Localized Cell Shape Changes. Developmental cell, Vol. 18. S. 64-76.

Vuilleumier, R. and Springhorn, A. and Patterson, L. and Koidl, S. and Hammerschmidt, M. and Affolter, M. and Pyrowolakis, G.. (2010) Control of Dpp morphogen signalling by a secreted feedback regulator. Nature Cell Biology, Vol. 12, H. 6. S. 611-617.

Oggier, D. M. and Lenard, A. and Kury, M. and Hoger, B. and Affolter, M. and Fent, K.. (2010) Effects of the protein kinase inhibitor PKC412 on gene expression and link to physiological effects in zebrafish Danio rerio eleuthero-embryos. Toxicological sciences, Vol. 119, H. 1. S. 104-115.

Chanut-Delalande, H. and Jung, A. C. and Baer, M. M. and Lin, L. and Payre, F. and Affolter, M.. (2010) The Hrs/Stam complex acts as a positive and negative regulator of RTK signaling during Drosophila development. PLoS one, Vol. 5, H. 4 , e10245.

2009

Affolter, M. and Zeller, R. and Caussinus, E.. (2009) Tissue remodelling through branching morphogenesis. Nature reviews. Molecular cell biology, Vol. 10, H. 12. S. 831-842.

Affolter, M. and Zeller, R.. (2009) From cells to organs : new insight into organ morphogenesis. Current opinion in genetics & development, Vol. 19, H. 5. S. 421-423.

Grieder, N. C. and Morata, G. and Affolter, M. and Gehring, W. J.. (2009) Spalt major controls the development of the notum and of wing hinge primordia of the Drosophila melanogaster wing imaginal disc. Developmental biology, Vol. 329, H. 2. S. 315-326.

Kleaveland, B. and Zheng, X. and Liu, J. J. and Blum, Y. and Tung, J. J. and Zou, Z. and Sweeney, S. M. and Chen, M. and Guo, L. and Lu, M. -min and Zhou, D. and Kitajewski, J. and Affolter, M. and Ginsberg, M. H. and Kahn, M. L.. (2009) Regulation of cardiovascular development and integrity by the heart of glass-cerebral cavernous malformation protein pathway. Nature medicine, Vol. 15, H. 2. S. 169-176.

Hamaratoglu, F. and Basler, K. and Affolter, M.. (2009) Confronting morphogen gradients : how important are they for growth? Science Signaling, Vol. 2, H. 94 , pe67.

Affolter, Markus. (2009) Ich will die Studierenden begeistern : [Interview]. [Basel].

Baer, Magdalena M. and Chanut-Delalande, Helene and Affolter, Markus. (2009) Cellular and molecular mechanisms underlying the formation of biological tubes. Current topics in developmental biology, vol. 89. S. 137-162.

Baer, M. M. and Bilstein, A. and Caussinus, E. and Csiszar, A. and Affolter, M. and Leptin, M.. (2009) The role of apoptosis in shaping the tracheal system in the Drosophila embryo. Mechanisms of Development, Vol. 127, H. 1-2. S. 28-35.

Li, K. and Blum, Y. and Verma, A. and Liu, Z. and Pramanik, K. and Leigh, N. R. and Chun, C. Z. and Samant, G. V. and Zhao, B. and Garnaas, M. K. and Horswill, M. A. and Affolter, M. and Stanhope, S. A. and North, P. E. and Miao, R. Q. and Wilkinson, G. A. and Ramchandran, R.. (2009) A non-coding antisense RNA in tie-1 locus regulates tie-1 function in vivo. Blood, Vol. 115, No. 1. S. 133-139.

2008

Caussinus, E. and Colombelli, J. and Affolter, M.. (2008) Tip-cell migration controls stalk-cell intercalation during Drosophila tracheal tube elongation. Current biology, Vol. 18, H. 22. S. 1727-1734.

Affolter, M. and Pyrowolakis, G. and Weiss, A. and Basler, K.. (2008) Signal-induced repression : the exception or the rule in developmental signaling? Developmental cell, Vol. 15, H. 1. S. 11-22.

Affolter, M. and Slattery, M. and Mann, R. S.. (2008) A lexicon for homeodomain-DNA recognition. Cell, Vol. 133, H. 7. S. 1133-1135.

Affolter, M. and Caussinus, E.. (2008) Tracheal branching morphogenesis in Drosophila : new insights into cell behaviour and organ architecture. Development, Vol. 135, H. 12. S. 2055-2064.

Blum, Y. and Belting, H. -G. and Ellertsdottir, E. and Herwig, L. and Luders, F. and Affolter, M.. (2008) Complex cell rearrangements during intersegmental vessel sprouting and vessel fusion in the zebrafish embryo. Developmental biology, Vol. 316, H. 2. S. 312-322.

Grieder, N. C. and Caussinus, E. and Parker, D. S. and Cadigan, K. and Affolter, M. and Luschnig, S.. (2008) gammaCOP is required for apical protein secretion and epithelial morphogenesis in Drosophila melanogaster. PLoS one, Vol. 3, H. 9 , e3241.

Gohl, D. and Muller, M. and Pirrotta, V. and Affolter, M. and Schedl, P.. (2008) Enhancer blocking and transvection at the Drosophila apterous locus. Genetics, Vol. 178, No. 1. S. 127-143.

2007

Merabet, S. and Saadaoui, M. and Sambrani, N. and Hudry, B. and Pradel, J. and Affolter, M. and Graba, Y.. (2007) A unique Extradenticle recruitment mode in the Drosophila Hox protein Ultrabithorax. Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, H. 43. S. 16946-16951.

Affolter, M. and Barde, Y.. (2007) Self-renewal in the fly kidney. Developmental cell, Vol. 13, H. 3. S. 321-322.

Affolter, M. and Basler, K.. (2007) The Decapentaplegic morphogen gradient : from pattern formation to growth regulation. Nature Reviews. Genetics, Vol. 8, H. 9. S. 663-674.

Belting, H. -G. and Affolter, M.. (2007) It takes guts to make a single lumen. Nature Cell Biology, Vol. 9, H. 8. S. 880-881.

Chanut-Delalande, H. and Jung, A. C. and Lin, L. and Baer, M. M. and Bilstein, A. and Cabernard, C. and Leptin, M. and Affolter, M.. (2007) A genetic mosaic analysis with a repressible cell marker screen to identify genes involved in tracheal cell migration during Drosophila air sac morphogenesis. Genetics, Vol. 176, No. 4. S. 2177-2187.

2006

Affolter, Markus. (2006) Markus Affolter. Interview. Current biology, 16 (4). R111-R112.

Cordier, F. and Hartmann, B. and Rogowski, M. and Affolter, M. and Grzesiek, S.. (2006) DNA recognition by the brinker repressor - an extreme case of coupling between binding and folding. Journal of molecular biology, Vol. 361, H. 4. S. 659-672.

Affolter, M. and Mann, R.. (2006) Hyped-up for Hox in Hyderabad : workshop on upstream and downstream of Hox genes. In: EMBO reports, Vol. 7, H. 7. London, S. 674-678.

Jung, A. C. and Ribeiro, C. and Michaut, L. and Certa, U. and Affolter, M.. (2006) Polychaetoid/ZO-1 is required for cell specification and rearrangement during Drosophila tracheal morphogenesis. Current biology, Vol. 16, H. 12. S. 1224-1231.

Neumann, M. and Affolter, M.. (2006) Remodelling epithelial tubes through cell rearrangements : from cells to molecules. EMBO reports, Vol. 7, H. 1. S. 36-40.

Affolter, M. and Pyrowolakis, G.. (2006) eIF4A goes beyond translation. Nature Cell Biology, Vol. 8, H. 12. S. 1319-1321.

2005

Cabernard, Clemens and Affolter, Markus. (2005) Distinct roles for two receptor tyrosine kinases in epithelial branching morphogenesis in Drosophila. Developmental cell, Vol. 9, H. 6. S. 831-842.

Merabet, S. and Ebner, A. and Affolter, M.. (2005) The Drosophila Extradenticle and Homothorax selector proteins control branchless/FGF expression in mesodermal bridge-cells. EMBO reports, Vol. 6, H. 8. S. 762-768.

Affolter, M. and Weijer, C. J.. (2005) Signaling to cytoskeletal dynamics during chemotaxis. Developmental cell, Vol. 9, H. 1. S. 19-34.

Ebner, A. and Cabernard, C. and Affolter, M. and Merabet, S.. (2005) Recognition of distinct target sites by a unique Labial/Extradenticle/Homothorax complex. Development, Vol. 132, H. 7. S. 1591-1600.

Jung, A. C. and Denholm, B. and Skaer, H. and Affolter, M.. (2005) Renal tubule development in Drosophila : a closer look at the cellular level. Journal of the American Society of Nephrology, Vol. 16, H. 2. S. 322-328.

2004

Leptin, M. and Affolter, M.. (2004) Drosophila gastrulation : identification of a missing link. Current biology, Vol. 14, H. 12 , R480-R482.

Ribeiro, C. and Neumann, M. and Affolter, M.. (2004) Genetic control of cell intercalation during tracheal morphogenesis in Drosophila. Current biology, Vol. 14, no. 24. S. 2197-2207.

Pyrowolakis, G. and Hartmann, B. and Muller, B. and Basler, K. and Affolter, M.. (2004) A simple molecular complex mediates widespread BMP-induced repression during Drosophila development. Developmental cell, Vol. 7, H. 2. S. 229-240.

Jazwinska, A. and Affolter, M.. (2004) A family of genes encoding zona pellucida (ZP) domain proteins is expressed in various epithelial tissues during Drosophila embryogenesis. Gene Expression Patterns, Vol. 4, H. 4. S. 413-421.

Petit, V. and Nussbaumer, U. and Dossenbach, C. and Affolter, M.. (2004) Downstream-of-FGFR is a fibroblast growth factor-specific scaffolding protein and recruits Corkscrew upon receptor activation. Molecular and cellular biology, Vol. 24, H. 9. S. 3769-3781.

Cabernard, C. and Neumann, M. and Affolter, M.. (2004) Cellular and molecular mechanisms involved in branching morphogenesis of the Drosophila tracheal system. Journal of applied physiology, Vol. 97, no. 6. S. 2347-2353.

2003

Groppe, J. and Greenwald, J. and Wiater, E. and Rodriguez-Leon, J. and Economides, A. N. and Kwiatkowski, W. and Baban, K. and Affolter, M. and Vale, W. W. and Izpisua Belmonte, J. C. and Choe, S.. (2003) Structural basis of BMP signaling inhibition by Noggin, a novel twelve-membered cystine knot protein. The Journal of bone and joint surgery, Vol. 85A, Suppl 3. S. 52-58.

Jazwinska, A. and Ribeiro, C. and Affolter, M.. (2003) Epithelial tube morphogenesis during Drosophila tracheal development requires Piopio, a luminal ZP protein. Nature Cell Biology, Vol. 5, H. 10. S. 895-901.

Muller, B. and Hartmann, B. and Pyrowolakis, G. and Affolter, M. and Basler, K.. (2003) Conversion of an extracellular Dpp/BMP morphogen gradient into an inverse transcriptional gradient. Cell, Vol. 113, H. 2. S. 221-233.

Ribeiro, C. and Petit, V. and Affolter, M.. (2003) Signaling systems, guided cell migration, and organogenesis : insights from genetic studies in Drosophila. Developmental biology, Vol. 260, H. 1. S. 1-8.

Affolter, M. and Bellusci, S. and Itoh, N. and Shilo, B. and Thiery, J. -P. and Werb, Z.. (2003) Tube or not tube : remodeling epithelial tissues by branching morphogenesis. Developmental cell, Vol. 4, H. 1. S. 11-18.

2002

Groppe, J. and Greenwald, J. and Wiater, E. and Rodriguez-Leon, J. and Economides, A. N. and Kwiatkowski, W. and Affolter, M. and Vale, W. W. and Belmonte, J. C. I. and Choe, S.. (2002) Structural basis of BMP signalling inhibition by the cystine knot protein Noggin. Nature, Vol. 420. S. 636-642.

Streit, A. and Kohler, R. and Marty, T. and Belfiore, M. and Takacs-Vellai, K. and Vigano, M. -A. and Schnabel, R. and Affolter, M. and Muller, F.. (2002) Conserved regulation of the Caenorhabditis elegans labial/Hox1 gene ceh-13. Developmental biology, Vol. 242, H. 2. S. 96-108.

Ribeiro, C. and Ebner, A. and Affolter, M.. (2002) In vivo imaging reveals different cellular functions for FGF and Dpp signaling in tracheal branching morphogenesis. Developmental cell, Vol. 2, H. 5. S. 677-683.

Ebner, A. and Kiefer, F. N. and Ribeiro, C. and Petit, V. and Nussbaumer, U. and Affolter, M.. (2002) Tracheal development in Drosophila melanogaster as a model system for studying the development of a branched organ. Gene, Vol. 287, H. 1/2. S. 55-66.

Petit, Valérie and Ribeiro, Carlos and Ebner, Andreas and Affolter, Markus. (2002) Regulation of cell migration during tracheal development in Drosophila melanogaster. The International Journal of Developmental Biology, Vol. 46, H. 1. S. 125-132.

2001

Dossenbach, C. and Rock, S. and Affolter, M.. (2001) Specificity of FGF signaling in cell migration in Drosophila. Development, Vol. 128, H. 22. S. 4563-4572.

Affolter, M. and Mann, R.. (2001) Development : legs, eyes, or wings - selectors and signals make the difference. Science, Vol. 292, H. 5519. S. 1080-1081.

Marty, T. and Vigano, M. A. and Ribeiro, C. and Nussbaumer, U. and Grieder, N. C. and Affolter, M.. (2001) A HOX complex, a repressor element and a 50 bp sequence confer regional specificity to a DPP-responsive enhancer. Development, Vol. 128, H. 14. S. 2833-2845.

Affolter, M. and Marty, T. and Vigano, M. A. and Jazwinska, A.. (2001) Nuclear interpretation of Dpp signaling in Drosophila. The EMBO journal, Vol. 20, H. 13. S. 3298-3305.

2000

Sivasankaran, R. and Vigano, M. A. and Muller, B. and Affolter, M. and Basler, K.. (2000) Direct transcriptional control of the Dpp target omb by the DNA binding protein Brinker. The EMBO journal, Vol. 19, H. 22. S. 6162-6172.

Udagawa, Y. and Hanai, J. and Tada, K. and Grieder, N. C. and Momoeda, M. and Taketani, Y. and Affolter, M. and Kawabata, M. and Miyazono, K.. (2000) Schnurri interacts with Mad in a Dpp-dependent manner. Genes to cells, Vol. 5, H. 5. S. 359-369.

Marty, T. and Muller, B. and Basler, K. and Affolter, M.. (2000) Schnurri mediates Dpp-dependent repression of brinker transcription. Nature Cell Biology, Vol. 2, H. 10. S. 745-749.

Affolter, M. and Shilo, B. Z.. (2000) Genetic control of branching morphogenesis during Drosophila tracheal development. Current opinion in cell biology, Vol. 12, H. 6. S. 731-735.

Amherd, R. and Hintermann, E. and Walz, D. and Affolter, M. and Meyer, U. A.. (2000) Purification, cloning, and characterization of a second arylalkylamine N-acetyltransferase from Drosophila melanogaster. DNA and cell biology, Vol. 19, H. 11. S. 697-705.

Nussbaumer, U. and Halder, G. and Groppe, J. and Affolter, M. and Montagne, J.. (2000) Expression of the blistered/DSRF gene is controlled by different morphogens during Drosophila trachea and wing development. Mechanisms of Development, Vol. 96 , H. 1. S. 27-36.

Affolter, M.. (2000) Cell-cell interaction during Drosophila embryogenesis : novel mechanisms and molecules. Ernst Schering Research Foundation Workshop, Vol. 29. S. 65-79.

1999

Affolter, M. and Marty, T. and Vigano, M. A.. (1999) Balancing import and export in development. Genes & development, Vol. 13, H. 8. S. 913-915.

Ryoo, H. D. and Marty, T. and Casares, F. and Affolter, M. and Mann, R. S.. (1999) Regulation of Hox target genes by a DNA bound Homothorax/Hox/Extradenticle complex. Development, Vol. 126, H. 22. S. 5137-5148.

1998

Chen, C. K. and Kuhnlein, R. P. and Eulenberg, K. G. and Vincent, S. and Affolter, M. and Schuh, R.. (1998) The transcription factors KNIRPS and KNIRPS RELATED control cell migration and branch morphogenesis during Drosophila tracheal development. Development, Vol. 125, H. 24. S. 4959-4968.

Groppe, J. and Rumpel, K. and Economides, A. N. and Stahl, N. and Sebald, W. and Affolter, M.. (1998) Biochemical and biophysical characterization of refolded Drosophila DPP : a homolog of bone morphogenetic proteins 2 and 4. Journal of Biological Chemistry, Vol. 273, H. 44. S. 29052-29065.

Mann, R. S. and Affolter, M.. (1998) Hox proteins meet more partners. Current opinion in genetics & development, Vol. 8, H. 4. S. 423-429.

Vincent, S. and Wilson, R. and Coelho, C. and Affolter, M. and Leptin, M.. (1998) The Drosophila protein Dof is specifically required for FGF signaling. Molecular cell, Vol. 2, H. 4. S. 515-525.

Brodbeck, D. and Amherd, R. and Callaerts, P. and Hintermann, E. and Meyer, U. A. and Affolter, M.. (1998) Molecular and biochemical characterization of the aaNAT1 (Dat) locus in Drosophila melanogaster : differential expression of two gene products. DNA and cell biology, Vol. 17, H. 7. S. 621-633.

1997

Yamamoto, Y. and Girard, F. and Bello, B. and Affolter, M. and Gehring, W. J.. (1997) The cramped gene of Drosophila is a member of the Polycomb-group, and interacts with mus209, the gene encoding Proliferating Cell Nuclear Antigen. Development, Vol. 124, H. 17. S. 3385-3394.

Grieder, N. C. and Marty, T. and Ryoo, H. D. and Mann, R. S. and Affolter, M.. (1997) Synergistic activation of a Drosophila enhancer by HOM/EXD and DPP signaling. The EMBO journal, Vol. 16, H. 24. S. 7402-7410.

Vincent, S. and Ruberte, E. and Grieder, N. C. and Chen, C. K. and Haerry, T. and Schuh, R. and Affolter, M.. (1997) DPP controls tracheal cell migration along the dorsoventral body axis of the Drosophila embryo. Development, Vol. 124, H. 14. S. 2741-2750.

1996

Montagne, J. and Groppe, J. and Guillemin, K. and Krasnow, M. A. and Gehring, W. J. and Affolter, M.. (1996) The Drosophila Serum Response Factor gene is required for the formation of intervein tissue of the wing and is allelic to blistered. Development, Vol. 122, H. 9. S. 2589-2597.

Guillemin, K. and Groppe, J. and Ducker, K. and Treisman, R. and Hafen, E. and Affolter, M. and Krasnow, M. A.. (1996) The pruned gene encodes the Drosophila serum response factor and regulates cytoplasmic outgrowth during terminal branching of the tracheal system. Development, Vol. 122, H. 5. S. 1353-1362.

1995

Ruberte, E. and Marty, T. and Nellen, D. and Affolter, M. and Basler, K.. (1995) An absolute requirement for both the type II and type I receptors, punt and thick veins, for dpp signaling in vivo. Cell, Vol. 80, H. 6. S. 889-897.

Grieder, N. C. and Nellen, D. and Burke, R. and Basler, K. and Affolter, M.. (1995) Schnurri is required for Drosophila Dpp signaling and encodes a zinc finger protein similar to the mammalian transcription factor PRDII-BF1. Cell, Vol. 81, H. 5. S. 791-800.

1994

Affolter, M. and Montagne, J. and Walldorf, U. and Groppe, J. and Kloter, U. and LaRosa, M. and Gehring, W. J.. (1994) The Drosophila SRF homolog is expressed in a subset of tracheal cells and maps within a genomic region required for tracheal development. Development, Vol. 120, H. 4. S. 743-753.

Gehring, W. J. and Qian, Y. Q. and Billeter, M. and Furukubo-Tokunaga, K. and Schier, A. F. and Resendez-Perez, D. and Affolter, M. and Otting, G. and Wuthrich, K.. (1994) Homeodomain-DNA recognition. Cell, Vol. 78, H. 2. S. 211-223.

Nellen, D. and Affolter, M. and Basler, K.. (1994) Receptor serine/threonine kinases implicated in the control of Drosophila body pattern by decapentaplegic. Cell, Vol. 78, H. 2. S. 225-237.

Affolter, M. and Nellen, D. and Nussbaumer, U. and Basler, K.. (1994) Multiple requirements for the receptor serine/threonine kinase thick veins reveal novel functions of TGF beta homologs during Drosophila embryogenesis. Development, Vol. 120, H. 11. S. 3105-3117.

Gehring, W. J. and Affolter, M. and Burglin, T.. (1994) Homeodomain proteins. Annual review of biochemistry, Vol. 63. S. 487-526.

Dorn, A. and Affolter, M. and Gehring, W. J. and Leupin, W.. (1994) Homeodomain proteins in development and therapy. Pharmacology & therapeutics, Vol. 61, no. 1-2. S. 155-184.

1993

Affolter, M. and Walldorf, U. and Kloter, U. and Schier, A. F. and Gehring, W. J.. (1993) Regional repression of a Drosophila POU box gene in the endoderm involves inductive interactions between germ layers. Development, Vol. 117, H. 4. S. 1199-1210.

1992

Qian, Y. Q. and Otting, G. and Furukubo-Tokunaga, K. and Affolter, M. and Gehring, W. J. and Wuthrich, K.. (1992) NMR structure determination reveals that the homeodomain is connected through a flexible linker to the main body in the Drosophila Antennapedia protein. Proceedings of the National Academy of Sciences of the United States of America, Vol. 89, H. 22. S. 10738-10742.

Furukubo-Tokunaga, K. and Muller, M. and Affolter, M. and Pick, L. and Kloter, U. and Gehring, W. J.. (1992) In vivo analysis of the helix-turn-helix motif of the fushi tarazu homeo domain of Drosophila melanogaster. Genes & development, Vol. 6, H. 6. S. 1082-1096.

Dorn, A. and Affolter, M. and Muller, M. and Gehring, W. J. and Leupin, W.. (1992) Distamycin-induced inhibition of homeodomain-DNA complexes. The EMBO journal, Vol. 11, H. 1. S. 279-286.

1991

Affolter, M. and Percival-Smith, A. and Muller, M. and Billeter, M. and Qian, Y. Q. and Otting, G. and Wuthrich, K. and Gehring, W. J.. (1991) Similarities between the homeodomain and the Hin recombinase DNA-binding domain. Cell, Vol. 64, H. 5. S. 879-880.

1990

Affolter, M. and Schier, A. and Gehring, W. J.. (1990) Homeodomain proteins and the regulation of gene expression. Current opinion in cell biology, Vol. 2, H. 3. S. 485-495.

Otting, G. and Qian, Y. Q. and Billeter, M. and Muller, M. and Affolter, M. and Gehring, W. J. and Wuthrich, K.. (1990) Protein - DNA contacts in the structure of a homeodomain - DNA complex determined by nuclear magnetic resonance spectroscopy in solution. The EMBO journal, Vol. 9, H. 10. S. 3085-3092.

Percival-Smith, A. and Muller, M. and Affolter, M. and Gehring, W. J.. (1990) The interaction with DNA of wild-type and mutant fushi tarazu homeodomains. The EMBO journal, Vol. 9, H. 12. S. 3967-3974.

Pick, L. and Schier, A. and Affolter, M. and Schmidt-Glenewinkel, T. and Gehring, W. J.. (1990) Analysis of the ftz upstream element : germ layer-specific enhancers are independently autoregulated. Genes & development, Vol. 4, H. 7. S. 1224-1239.

Affolter, M. and Percival-Smith, A. and Muller, M. and Leupin, W. and Gehring, W. J.. (1990) DNA binding properties of the purified Antennapedia homeodomain. Proceedings of the National Academy of Sciences of the United States of America, Vol. 87, H. 11. S. 4093-4097.

Gehring, W. J. and Muller, M. and Affolter, M. and Percival-Smith, A. and Billeter, M. and Qian, Y. Q. and Otting, G. and Wuthrich, K.. (1990) The structure of the homeodomain and its functional implications. Trends in Genetics, Vol. 6, no. 10. S. 323-329.

1988

Muller, M. and Affolter, M. and Leupin, W. and Otting, G. and Wuthrich, K. and Gehring, W. J.. (1988) Isolation and sequence-specific DNA binding of the Antennapedia homeodomain. The EMBO journal, Vol. 7, H. 13. S. 4299-4304.

Otting, G. and Qian, Y. Q. and Muller, M. and Affolter, M. and Gehring, W. and Wuthrich, K.. (1988) Secondary structure determination for the Antennapedia homeodomain by nuclear magnetic resonance and evidence for a helix-turn-helix motif. The EMBO journal, Vol. 7, H. 13. S. 4305-4309.

1987

Affolter, M. and Cote, J. and Renaud, J. and Ruiz-Carrillo, A.. (1987) Regulation of histone and beta A-globin gene expression during differentiation of chicken erythroid cells. Molecular and cellular biology, Vol. 7, H. 10. S. 3663-3672.

1986

Affolter, M. and Ruiz-Carrillo, A.. (1986) Transcription unit of the chicken histone H5 gene and mapping of H5 pre-mRNA sequences. Journal of biological chemistry, Vol. 261 , no. 25. S. 11496-11502.

Affolter, M. and Labbe, D. and Jean, A. and Raymond, M. and Noel, D. and Labelle, Y. and Parent-Vaugeois, C. and Lambert, M. and Bojanowski, R. and Anderson, A.. (1986) cDNA clones for liver cytochrome P-450s from individual aroclor-treated rats : constitutive expression of a new P-450 gene related to phenobarbital-inducible forms. DNA, Vol. 5, H. 3. S. 209-218.

1985

Affolter, M. and Ruiz-Carrillo, A.. (1985) L'expression des gènes et ses conséquences dans les maladies génétiques. L'Union médicale du Canada, Vol. 114, H. 9. S. 724-726.

Anderson, A. and Waithe, W. and Labbé, D. and Affolter, M. and Labelle, Y.. (1985) Diversité des cytochromes P-450 hépatiques : rôle dans la cancérogénèse chimique. L'Union médicale du Canada, Vol. 114, H. 9. S. 731-732.

1984

Affolter, M. and Anderson, A.. (1984) Segmental homologies in the coding and 3' non-coding sequences of rat liver cytochrome P-450e and P-450b cDNAs and cytochrome P-450e-like genes. Biochemical and Biophysical Research Communications, Vol. 118, H. 2. S. 655-662.

1983

Ruiz-Carrillo, A. and Affolter, M. and Renaud, J.. (1983) Genomic organization of the genes coding for the six main histones of the chicken : complete sequence of the H5 gene. Journal of molecular biology, Vol. 170, H. 4. S. 843-859.

Affolter, M. and Parent-Vaugeois, C. and Anderson, A.. (1983) Mutagenic response of Ames strains cured of their inducible Fels 1 and Fels 2 prophages. Cancer research, 43,2. S. 653-659.

Affolter, M. and Parent-Vaugeois, C. and Anderson, A.. (1983) Curing and induction of the Fels 1 and Fels 2 prophages in the Ames mutagen tester strains of Salmonella typhimurium. Mutation research, Vol. 110, no. 2. S. 243-262.