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Mohammed, Inayathulla and Schmitz, Kai A. and Schenck, Niko and Balasopoulos, Dimitrios and Topitsch, Annika and Maier, Timm and Abrahams, Jan Pieter. (2022) Catalytic cycling of human mitochondrial Lon protease. Structure, 30 (9). pp. 1254-1268.e7.

Merg, Andrea D. and Touponse, Gavin and van Genderen, Eric and Blum, Thorsten B. and Zuo, Xiaobing and Bazrafshan, Alisina and Siaw, Hew Ming Helen and McCanna, Arthur and Dyer, R. Brian and Salaita, Khalid and Abrahams, Jan Pieter and Conticello, Vincent P.. (2020) Shape-Shifting Peptide Nanomaterials: Surface Asymmetry Enables pH-Dependent Formation and Interconversion of Collagen Tubes and Sheets. Journal of the American Chemical Society, 142 (47). pp. 19956-19968.

Xiao, Xiansha and Elsayed, Somayah S. and Wu, Changsheng and van der Heul, Helga U. and Metsä-Ketelä, Mikko and Du, Chao and Prota, Andrea E. and Chen, Chun-Chi and Liu, Weidong and Guo, Rey-Ting and Abrahams, Jan Pieter and van Wezel, Gilles P.. (2020) Functional and Structural Insights into a Novel Promiscuous Ketoreductase of the Lugdunomycin Biosynthetic Pathway. ACS Chemical Biology, 15 (9). pp. 2529-2538.

van Schayck, J. Paul and van Genderen, Eric and Maddox, Erik and Roussel, Lucas and Boulanger, Hugo and Fröjdh, Erik and Abrahams, Jan-Pieter and Peters, Peter J. and Ravelli, Raimond B. G.. (2020) Sub-pixel electron detection using a convolutional neural network. Ultramicroscopy, 218. p. 113091.

Matz, Joachim M. and Drepper, Benjamin and Blum, Thorsten B. and van Genderen, Eric and Burrell, Alana and Martin, Peer and Stach, Thomas and Collinson, Lucy M. and Abrahams, Jan Pieter and Matuschewski, Kai and Blackman, Michael J.. (2020) A lipocalin mediates unidirectional heme biomineralization in malaria parasites. Proceedings of the National Academy of Sciences of the United States of America, 117 (28). pp. 16546-16556.

Zhang, Zhenzhen and Wen, Kai and Zhang, Chao and Laroche, Fabrice and Wang, Zhenglong and Zhou, Qiang and Liu, Zunfeng and Abrahams, Jan Pieter and Zhou, Xiang. (2020) Extracellular Nanovesicle Enhanced Gene Transfection Using Polyethyleneimine in HEK293T Cells and Zebrafish Embryos. Frontiers in Bioengineering and Biotechnology, 8. p. 448.

Thakkar, Pooja and Guzenko, Vitaliy A. and Lu, Peng-Han and Dunin-Borkowski, Rafal E. and Abrahams, Jan Pieter and Tsujino, Soichiro. (2020) Fabrication of low aspect ratio three-element Boersch phase shifters for voltage-controlled three electron beam interference. Journal of Applied Physics, 128 (13). p. 134502.

Blum, Thorsten B. and Filippidou, Sevasti and Fatton, Mathilda and Junier, Pilar and Abrahams, Jan Pieter. (2019) The wild-type flagellar filament of the Firmicute Kurthia at 2.8 Å resolution in vivo. Scientific reports, 9 (1). p. 14948.

Gemmi, Mauro and Mugnaioli, Enrico and Gorelik, Tatiana E. and Kolb, Ute and Palatinus, Lukas and Boullay, Philippe and Hovmöller, Sven and Abrahams, Jan Pieter. (2019) 3D Electron Diffraction: The Nanocrystallography Revolution. ACS central science, 5 (8). pp. 1315-1329.

Merg, Andrea D. and Touponse, Gavin and van Genderen, Eric and Zuo, Xiaobing and Bazrafshan, Alisina and Blum, Thorsten and Hughes, Spencer and Salaita, Khalid and Abrahams, Jan Pieter and Conticello, Vincent P.. (2019) 2D Crystal Engineering of Nanosheets Assembled from Helical Peptide Building Blocks. Angewandte Chemie (International ed. in English), 58 (38). pp. 13507-13512.

Moradi, Mina and Opara, Nadia L. and Tulli, Ludovico G. and Wäckerlin, Christian and Dalgarno, Scott J. and Teat, Simon J. and Baljozovic, Milos and Popova, Olha and van Genderen, Eric and Kleibert, Armin and Stahlberg, Henning and Abrahams, Jan Pieter and Padeste, Celestino and Corvini, Philippe F.-X. and Jung, Thomas A. and Shahgaldian, Patrick. (2019) Supramolecular architectures of molecularly thin yet robust free-standing layers. Science Advances, 5 (2). eaav4489.

Clabbers, Max T. B. and Gruene, Tim and van Genderen, Eric and Abrahams, Jan Pieter. (2019) Reducing dynamical electron scattering reveals hydrogen atoms. Acta crystallographica. Section A, Foundations and advances, 75 (Pt 1). pp. 82-93.

Blum, T. B. and Abrahams, J. P.. (2019) 6T17: Cryo-EM structure of the wild-type flagellar filament of the Firmicute Kurthia. Worldwide Protein Data Bank. 6T17.

Merg, Andrea D. and van Genderen, Eric and Bazrafshan, Alisina and Su, Hanquan and Zuo, Xiaobing and Touponse, Gavin and Blum, Thorsten B. and Salaita, Khalid and Abrahams, Jan Pieter and Conticello, Vincent P.. (2019) Seeded Heteroepitaxial Growth of Crystallizable Collagen Triple Helices: Engineering Multifunctional Two-Dimensional Core-Shell Nanostructures. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 141 (51). pp. 20107-20117.

Latychevskaia, Tatiana and Abrahams, Jan Pieter. (2019) Inelastic scattering and solvent scattering reduce dynamical diffraction in biological crystals. Acta Crystallographica Section B-Structural Science Crystal Engineering and Materials, 75. pp. 523-531.

Tinti, Gemma and Fröjdh, Erik and van Genderen, Eric and Gruene, Tim and Schmitt, Bernd and de Winter, D. A. Matthijs and Weckhuysen, Bert M. and Abrahams, Jan Pieter. (2018) Electron crystallography with the EIGER detector. IUCrJ, 5 (Pt 2). pp. 190-199.

Wallin, Cecilia and Hiruma, Yoshitaka and Wärmländer, Sebastian K. T. S. and Huvent, Isabelle and Jarvet, Jüri and Abrahams, Jan Pieter and Gräslund, Astrid and Lippens, Guy and Luo, Jinghui. (2018) The Neuronal Tau Protein Blocks in Vitro Fibrillation of the Amyloid-β (Aβ) Peptide at the Oligomeric Stage. Journal of the American Chemical Society. pp. 8138-8146.

Thomas, Brijith and Dubey, Rajeev K. and Clabbers, Max T. B. and Gupta, Karthick Babu Sai Sankar and van Genderen, Eric and Jager, Wolter F. and Abrahams, Jan Pieter and Sudholter, Ernst J. R. and de Groot, Huub J. M.. (2018) A Molecular Level Approach To Elucidate the Supramolecular Packing of Light-Harvesting Antenna Systems. Chemistry (Weinheim an der Bergstrasse, Germany), 24 (56). pp. 14989-14993.

Clabbers, Max T. B. and Gruene, Tim and Parkhurst, James M. and Abrahams, Jan Pieter and Waterman, David G.. (2018) Electron diffraction data processing with DIALS. Acta crystallographica. Section D, Structural biology, 74 (Pt 6). pp. 506-518.

Tinti, G. and Frojdh, E. and Van Genderen, E. and Gruene, T. and Schmitt, B. and De Winter, D. A. M. and Weckhuysen, B. M. and Abrahams, J. P.. (2018) CCDC 1817054: Experimental Crystal Structure Determination. Cambridge Structural Database. p. 1817054.

Clabbers, Max T. B. and Abrahams, Jan Pieter. (2018) Electron diffraction and three-dimensional crystallography for structural biology. CRYSTALLOGRAPHY REVIEWS, 24 (3). pp. 176-204.

Matheson, John and Moldovan, G. and Kirkland, Angus and Allinson, Nigel and Abrahams, Jan Pieter. (2017) Testing and Comparison of Imaging Detectors for Electrons in the Energy Range 10–20 keV. Journal of Instrumentation, 12 (11). C11016.

Clabbers, Max T. B. and van Genderen, Eric and Wan, Wei and Wiegers, Emiel L. and Gruene, Tim and Abrahams, Jan Pieter. (2017) Protein structure determination by electron diffraction using a single three-dimensional nanocrystal. Acta crystallographica. Section D, Structural biology, 73 (Pt 9). pp. 738-748.

Yin, Qu and Liu, Zunfeng and Laroche, Fabrice and Zhou, Xiang and Shao, Ningning and Lin, Bencai and Wang, Run and Yuan, Ningyi and Ding, Jianning and Abrahams, Jan Pieter. (2017) A Novel Capturing Method for Quantification of Extra-Cellular Nanovesicles. Journal of nanoscience and nanotechnology, 17 (2). pp. 908-913.

Su, Jian and Wang, Hongyan and Wu, Kunkun and Liu, Zhongsheng and Yin, Qu and Wang, Run and Lv, Wei and Yin, Shougen and Liu, Zunfeng and Abrahams, Jan Pieter. (2017) Neutravidin-Mediated Extraction of Isolated Small Diameter Single Walled Carbon Nanotubes for Bio-Recognition. Journal of nanoscience and nanotechnology, 17 (5). pp. 3588-3596.

Nederlof, Igor and van Genderen, Eric and Clabbers, Maddox E. and Abrahams, Jan Pieter. (2017) Electron Crystallography of Protein Nano-Crystals. Acta Crystallographica Section A: Foundations And Advances, A73. a297-a298.

Nikolopoulos, Stavros and Galanis, Athanasios S. and Vallcorba, Oriol and Eggeman, Alex and Das, Partha Pratim and Abrahams, Jan Pieter and Rauch, Edgar and Midgley, Paul and Gemmi, Mauro. (2017) Random electron diffraction tomography for structure analysis of pharmaceuticals. Acta Crystallographica A-Foundation And Advances, 73. c980.

Wang, Run and Boleij, Marissa and Yin, Qu and Galjart, Niels and Lin, Bencai and Yuan, Ningyi and Zhou, Xiang and Tan, Ming and Ding, Jianning and Liu, Zunfeng and Abrahams, Jan Pieter. (2017) Purification of Biotinylated Proteins Using Single Walled Carbon Nanotube-Streptavidin Complexes. Journal of nanoscience and nanotechnology, 17 (2). pp. 926-931.

van Genderen, E. and Clabbers, M. T. B. and Das, P. P. and Stewart, A. and Nederlof, I. and Barentsen, K. C. and Portillo, Q. and Pannu, N. S. and Nicolopoulos, S. and Gruene, T. and Abrahams, J. P.. (2016) Ab initio structure determination of nanocrystals of organic pharmaceutical compounds by electron diffraction at room temperature using a Timepix quantum area direct electron detector. Acta Crystallographica Section A : Foundations and Advances, 72 (2). pp. 236-242.

Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Abrahams, Jan Pieter. (2016) Reciprocal Molecular Interactions between the Aβ Peptide Linked to Alzheimer's Disease and Insulin Linked to Diabetes Mellitus Type II. ACS Chemical Neuroscience , 7 (3). pp. 269-274.

Wallin, Cecilia and Kulkarni, Yashraj S. and Abelein, Axel and Jarvet, Jüri and Liao, Qinghua and Strodel, Birgit and Olsson, Lisa and Luo, Jinghui and Abrahams, Jan Pieter and Sholts, Sabrina B. and Roos, Per M. and Kamerlin, Shina C. L. and Gräslund, Astrid and Wärmländer, Sebastian K. T. S.. (2016) Characterization of Mn(II) ion binding to the amyloid-β peptide in Alzheimer's disease. Journal of Trace Elements in Medicine and Biology, 38. pp. 183-193.

Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Abrahams, Jan Pieter. (2016) Cross-interactions between the Alzheimer Disease Amyloid-β Peptide and Other Amyloid Proteins: A Further Aspect of the Amyloid Cascade Hypothesis. Journal of Biological Chemistry, 291 (32). pp. 16485-16493.

Tiiman, Ann and Luo, Jinghui and Wallin, Cecilia and Olsson, Lisa and Lindgren, Joel and Jarvet, Jϋri and Per, Roos and Sholts, Sabrina B. and Rahimipour, Shai and Abrahams, Jan Pieter and Karlström, Amelie Eriksson and Gräslund, Astrid and Wärmländer, Sebastian K. T. S.. (2016) Specific Binding of Cu(II) Ions to Amyloid-Beta Peptides Bound to Aggregation-Inhibiting Molecules or SDS Micelles Creates Complexes that Generate Radical Oxygen Species. Journal of Alzheimer's Disease, 54 (3). pp. 971-982.

Abrahams, Jan Pieter. (2016) Electron nanodiffraction for structural biology. Acta Crystallographica A-Foundation And Advances, 72 (a1). s6.

Afanasyev, Pavel and Ravelli, Raimond B. G. and Matadeen, Rishi and De Carlo, Sacha and van Duinen, Gijs and Alewijnse, Bart and Peters, Peter J. and Abrahams, Jan-Pieter and Portugal, Rodrigo V. and Schatz, Michael and van Heel, Marin. (2015) A posteriori correction of camera characteristics from large image data sets. Scientific Reports, 5. p. 10317.

Luo, Jinghui and Abrahams, Jan Pieter. (2014) Cyclic Peptides as Inhibitors of Amyloid Fibrillation. Chemistry - A European Journal, 20 (9). pp. 2410-2419.

Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Chien-Hung, Yu and Muhammad, Kamran and Gräslund, Astrid and Abrahams, Jan Pieter. (2014) The Aβ peptide forms non-amyloid fibrils in the presence of carbon nanotubes. Nanoscale, 6 (12). pp. 6720-6726.

Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Abrahams, Jan Pieter. (2014) Alzheimer Peptides Aggregate into Transient Nanoglobules That Nucleate Fibrils. Biochemistry, 53 (40). pp. 6302-6308.

Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Abrahams, Jan Pieter. (2014) Non-chaperone Proteins Can Inhibit Aggregation and Cytotoxicity of Alzheimer Amyloid beta Peptide. Journal of Biological Chemistry, 289 (40). pp. 27766-27775.

Luo, Jinghui and Mohammed, Inayathulla and Warmlander, Sebastian K. T. S. and Hiruma, Yoshitaka and Graslund, Astrid and Abrahams, Jan Pieter. (2014) Endogenous Polyamines Reduce the Toxicity of Soluble A beta Peptide Aggregates Associated with Alzheimer's Disease. Biomacromolecules, 15 (6). pp. 1985-1991.

Abelein, Axel and Abrahams, Jan Pieter and Danielsson, Jens and Graslund, Astrid and Jarvet, Juri and Luo, Jinghui and Tiiman, Ann and Warmlander, Sebastian K. T. S.. (2014) The hairpin conformation of the amyloid beta peptide is an important structural motif along the aggregation pathway. Journal of Biological Inorganic Chemistry, 19 (4-5). pp. 623-634.

Liu, Zunfeng and Voskamp, Patrick and Zhang, Yue and Chu, Fuqiang and Abrahams, Jan Pieter. (2013) Capture of unstable protein complex on the streptavidin-coated single-walled carbon nanotubes. Journal of Nanoparticle Research, 15 (4). A 1582.

Luo, Jinghui and Otero, Jose M. and Yu, Chien-Hung and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Overhand, Mark and Abrahams, Jan Pieter. (2013) Inhibiting and Reversing Amyloid‐β Peptide (1–40) Fibril Formation with Gramicidin S and Engineered Analogues. Chemistry - A European Journal, 19 (51). pp. 17338-17348.

ten Bruggencate, Filip and Laroche, Fabrice and Zhang, Yue and Song, Guoqiang and Yin, Shougen and Abrahams, Jan Pieter and Liu, Zunfeng. (2013) Visualizing the localization of transfection complexes during graphene nanoparticle-based transfection. Journal of Materials Chemistry B, 1 (46). pp. 6353-6358.

Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Abrahams, Jan Pieter. (2013) Human lysozyme inhibits the in vitro aggregation of Aβ peptides, which in vivo are associated with Alzheimer's disease. Chemical Communications , 49 (58). pp. 6507-6509.

Nederlof, Igor and van Genderen, Eric and Li, Yao-Wang and Abrahams, Jan Pieter. (2013) A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals. Acta Crystallographica. Section D, Biological Crystallography, 69. pp. 1223-1230.

Luo, Jinghui and Zwier, Raphael and Abrahams, Jan Pieter. (2013) An efficient nanolitre-volume multi-channel device for highly viscous materials used in membrane protein crystallization. Journal of applied crystallography, 46. pp. 829-831.

Nederlof, Igor and Li, Yao Wang and van Heel, Marin and Abrahams, Jan Pieter. (2013) Imaging protein three-dimensional nanocrystals with cryo-EM. Acta Crystallographica. Section D, Biological Crystallography, 69. pp. 852-859.

Luo, Jinghui and Yu, Chien-Hung and Yu, Huixin and Borstnar, Rok and Kamerlin, Shina C. L. and Gräslund, Astrid and Abrahams, Jan Pieter and Wärmländer, Sebastian K. T. S.. (2013) Cellular Polyamines Promote Amyloid-Beta (A beta) Peptide Fibrillation and Modulate the Aggregation Pathways. ACS Chemical Neuroscience , 4 (3). pp. 454-462.

Meulenbroek, Elisabeth M. and Thomassen, Ellen A. J. and Pouvreau, Laurice and Abrahams, Jan Pieter and Gruppen, Harry and Pannu, Navraj S.. (2012) Structure of a post-translationally processed heterodimeric double-headed Kunitz-type serine protease inhibitor from potato. Acta Crystallographica. Section D, Biological Crystallography, 68 (Pt 7). pp. 794-799.

Liu, Zunfeng and Galli, Federica and Waterreus, Willem-Jan and Meulenbroek, Elisabeth and Koning, Roman I. and Lamers, Gerda E. M. and Olsthoorn, René C. L. and Pannu, Navraj and Oosterkamp, Tjerk H. and Koster, Abraham J. and Dame, Remus T. and Abrahams, Jan Pieter. (2012) Single-walled carbon nanotubes as scaffolds to concentrate DNA for the study of DNA-protein interactions. ChemPhysChem, 13 (6). pp. 1569-1575.

Jiang, Linhua and Georgieva, Dilyana and Nederlof, Igor and Liu, Zunfeng and Abrahams, Jan Pieter. (2011) Image processing and lattice determination for three-dimensional nanocrystals. Microscopy and Microanalysis, 17 (6). pp. 879-885.

Pannu, Navraj S. and Waterreus, Willem Jan and Skubák, Pavol and Sikharulidze, Irakli and Abrahams, Jan Pieter and de Graaff, Rudolf A. G.. (2011) Recent advances in the CRANK software suite for experimental phasing. Acta Crystallographica. Section D, Biological Crystallography, 67 (Pt 4). pp. 331-337.

Abrahams, Jan-Pieter and Apweiler, Rolf and Balling, Rudi and Bertero, Michela G. and Bujnicki, Janusz M. and Chayen, Naomi E. and Chène, Patrick and Corthals, Gary L. and Dyląg, Tomasz and Förster, Friedrich and Heck, Albert J. R. and Henderson, Peter J. F. and Herwig, Ralf and Jehenson, Philippe and Kokalj, Sasa Jenko and Laue, Ernest and Legrain, Pierre and Martens, Lennart and Migliorini, Cristiano and Musacchio, Andrea and Podobnik, Marjetka and Schertler, Gebhard F. X. and Schreiber, Gideon and Sixma, Titia K. and Smit, August B. and Stuart, David and Svergun, Dmitri I. and Taussig, Michael J.. (2011) "4D Biology for health and disease" workshop report. New biotechnology, 28 (4). pp. 291-293.

Jiang, Linhua and Liu, Zunfeng and Georgieva, Dilyana and Kuil, Maxim E. and Abrahams, Jan Pieter. (2010) A novel approximation method of CTF amplitude correction for 3D single particle reconstruction. Ultramicroscopy, 110 (4). pp. 350-358.

Liu, Zunfeng and Jiang, Linhua and Galli, Federica and Nederlof, Igor and Olsthoorn, René C. L. and Lamers, Gerda E. M. and Oosterkamp, Tjerk. H. and Abrahams, Jan Pieter. (2010) A Graphene Oxide˙Streptavidin Complex for Biorecognition - Towards Affinity Purification. Advanced Functional Materials, 20 (17). pp. 2857-2865.

Abrahams, Jan Pieter. (2010) The strong phase object approximation may allow extending crystallographic phases of dynamical electron diffraction patterns of 3D protein nano-crystals. Zeitschrift für Kristallographie - Crystalline Materials, 225 (2-3). pp. 67-76.

Liu, Zunfeng and Galli, Federica and Janssen, Kjeld G. H. and Jiang, Linhua and van der Linden, Heiko J. and de Geus, Daniël C. and Voskamp, Patrick and Kuil, Maxim E. and Olsthoorn, René C. L. and Oosterkamp, Tjerk H. and Hankemeier, Thomas and Abrahams, Jan Pieter. (2010) Stable Single-Walled Carbon Nanotube-Streptavidin Complex for Biorecognition. Journal of Physical Chemistry C, 114 (10). pp. 4345-4352.

De Geus, D. C. and Thomassen, E. A. J. and Hagedoorn, P. L. and Pannu, N. S. and Abrahams, J. P.. (2009) 2VXH: The Crystal Structure Of Chlorite Dismutase: A Detox Enzyme Producing Molecular Oxygen. Worldwide Protein Data Bank. 2VXH.

De Geus, D. C. and Van Roon, A. M. M. and Thomassen, E. A. J. and Hokke, C. H. and Deelder, A. M. and Abrahams, J. P.. (2009) 2VQ1: Anti Trimeric Lewis X Fab54-5C10-A. Worldwide Protein Data Bank. 2VQ1.

van Gastel, R. and Sikharulidze, I. and Schramm, S. and Abrahams, J. P. and Poelsema, B. and Tromp, R. M. and van der Molen, S. J.. (2009) Medipix 2 detector applied to low energy electron microscopy. Ultramicroscopy, 110 (1). pp. 33-35.

van Haren, Jeffrey and Draegestein, Katharina and Keijzer, Nanda and Abrahams, Jan Pieter and Grosveld, Frank and Peeters, Pieter Johan and Moechars, Dieder and Galjart, Niels. (2009) Mammalian Navigators are Microtubule Plus-End Tracking Proteins that can Reorganize the Cytoskeleton to Induce Neurite-Like Extensions. Cell Motility and the Cytoskeleton , 66 (10). pp. 824-838.

de Geus, Daniël C. and van Roon, Anne-Marie M. and Thomassen, Ellen A. J. and Hokke, Cornelis H. and Deelder, André M. and Abrahams, Jan Pieter. (2009) Characterization of a diagnostic Fab fragment binding trimeric Lewis X. Proteins: Structure, Function, and Bioinformatics , 76 (2). pp. 439-447.

Jiang, Linhua and Georgieva, Dilyana and Zandbergen, Henny W. and Abrahams, Jan Pieter. (2009) Unit-cell determination from randomly oriented electron-diffraction patterns. Acta Crystallographica. Section D, Biological Crystallography, 65. pp. 625-632.

Pannu, Navraj S. and Ravelli, Raimond B. G. and Abrahams, Pieter. (2009) The Max-Inf2/Lorentz Center workshop on New algorithms in macromolecular crystallography and electron microscopy. Acta Crystallographica. Section D, Biological Crystallography, 65. pp. 623-624.

Meulenbroek, Elisabeth M. and Paspaleva, Keti and Thomassen, Ellen A. J. and Abrahams, Jan Pieter and Goosen, Nora and Pannu, Navraj S.. (2009) Involvement of a carboxylated lysine in UV damage endonuclease. Protein Science, 18 (3). pp. 549-558.

de Geus, Daniël C. and Thomassen, Ellen A. J. and Hagedoorn, Peter-Leon and Pannu, Navraj S. and van Duijn, Esther and Abrahams, Jan Pieter. (2009) Crystal Structure of Chlorite Dismutase, a Detoxifying Enzyme Producing Molecular Oxygen. Journal of Molecular Biology, 387 (1). pp. 192-206.

Zovko, Sandra and Abrahams, Jan Pieter and Koster, Abraham J. and Galjart, Niels and Mommaas, A. Mieke. (2008) Microtubule plus-end conformations and dynamics in the periphery of interphase mouse fibroblasts. Molecular Biology of the Cell, 19 (7). pp. 3138-3146.

de Geus, Daniël C. and Thomassen, Ellen A. J. and van der Feltz, Clarisse L. and Abrahams, Jan Pieter. (2008) Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of chlorite dismutase: a detoxifying enzyme producing molecular oxygen. Acta Crystallographica Section F, 64. pp. 730-732.

Jiang, L. and Schaffitzel, C. and Bingel-Erlenmeyer, R. and Ban, N. and Korber, P. and Koning, R. I. and Plaisier, J. R. and Abrahams, J. P.. (2008) EMD-1456.map. Electron Microscopy Data Bank. EMD-1456.map.

Jiang, Linhua and Schaffitzel, Christiane and Bingel-Erlenmeyer, Rpuven and Ban, Nenad and Korber, Philipp and Koning, Roman I. and Plaisier, Jasper R. and Abrahams, Jan Pieter. (2008) EMD-1455: Recycling of Aborted Ribosomal 50S Subunit-Nascent Chain-tRNA Complexes by the Heat Shock Protein Hsp15. Journal of Molecular Biology, ‏ 386 (5). ‏ 1357-1367.

Schaffitzel, C. and Oswald, M. and Berger, I. and Ishikawa, T. and Abrahams, J. P. and Koerten, H. K. and Koning, R. I. and Ban, N.. (2008) EMD-1250.map. Electron Microscopy Data Bank. EMD-1250.map.

Schaffitzel, C. and Oswald, M. and Berger, I. and Ishikawa, T. and Abrahams, J. P. and Koerten, H. K. and Koning, R. I. and Ban, N.. (2008) EMD-1251: Structure of the E. coli signal recognition particle bound to a translating ribosome. Electron Microscopy Data Bank. EMD-1251.

Meulenbroek, E. M. and Paspaleva, K. and Thomassen, E. A. J. and Abrahams, J. P. and Goosen, N. and Pannu, N. S.. (2008) 3C0S: UVDE 3 metals. Worldwide Protein Data Bank. 3C0S.

Meulenbroek, E. M. and Paspaleva, K. and Thomassen, E. A. J. and Abrahams, J. P. and Goosen, N. and Pannu, N. S.. (2008) 3C0Q: Uvde E175a. Worldwide Protein Data Bank. 3C0Q.

Meulenbroek, E. M. and Paspaleva, K. and Thomassen, E. A. J. and Abrahams, J. P. and Goosen, N. and Pannu, N. S.. (2008) 3C0L: Uvde K229r. Worldwide Protein Data Bank. 3C0L.

Meulenbroek, E. M. and Paspaleva, K. and Thomassen, E. A. J. and Abrahams, J. P. and Goosen, N. and Pannu, N. S.. (2008) 3BZG: UVDE pH4.4. Worldwide Protein Data Bank. 3BZG.

Meulenbroek, E. M. and Paspaleva, K. and Thomassen, E. A. J. and Abrahams, J. P. and Goosen, N. and Pannu, N. S.. (2008) 3BZJ: Uvde K229l. Worldwide Protein Data Bank. 3BZJ.

Jiang, L. and Abrahams, J. P.. (2008) 3BBU: The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex. Worldwide Protein Data Bank. 3BBU.

Jiang, L. and Abrahams, J. P.. (2008) 3BBX: The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex. Worldwide Protein Data Bank. 3BBX.

Jiang, L. and Abrahams, J. P.. (2008) 3BBV: The tRNA(phe) fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex. Worldwide Protein Data Bank. 3BBV.

Paspaleva, Keti and Thomassen, Ellen and Pannu, Navraj S. and Iwai, Shigenori and Moolenaar, Geri F. and Goosen, Nora and Abrahams, Jan Pieter. (2007) Crystal structure of the DNA repair enzyme ultraviolet damage endonuclease. Structure, 15 (10). pp. 1316-1324.

Georgieva, Dilyana G. and Kuil, Maxim E. and Oosterkamp, Tjerk H. and Zandbergen, Henny W. and Abrahams, Jan Pieter. (2007) Heterogeneous nucleation of three-dimensional protein nanocrystals. Acta Crystallographica. Section D, Biological Crystallography, 63. pp. 564-570.

Schaffitzel, Christiane and Oswald, Miro and Berger, Imre and Ishikawa, Takashi and Abrahams, Jan Pieter and Koerten, Henk K. and Koning, Roman I. and Ban, Nenad. (2007) Erratum: Structure of the E-coli signal recognition particle bound to a translating ribosome (vol 444, pg 503, 2006). Nature, 448 (7157). p. 1076.

Plaisier, Jasper R. and Jiang, Linhua and Abrahams, Jan Pieter. (2007) Cyclops: New modular software suite for cryo-EM. Journal of structural biology, 157 (1). pp. 19-27.

Schaffitzel, Christiane and Oswald, Miro and Berger, Imre and Ishikawa, Takashi and Abrahams, Jan Pieter and Koerten, Henk K. and Koning, Roman I. and Ban, Nenad. (2006) Structure of the E. coli signal recognition particle bound to a translating ribosome. Nature, 444 (7118). pp. 503-506.

Thomassen, E. A. J. and Dekking, E. H. A. and Thompson, A. and Franken, K. L. and Sanal, Ö. and Abrahams, J. P. and van Tol, M. J. D. and Koning, F.. (2006) The Impact of Single Amino Acid Substitutions in CD3γ on the CD3ϵγ Interaction and T-Cell Receptor–CD3 Complex Formation. Human immunology, 67 (8). pp. 579-588.

Kuil, Maxim E. and Abrahams, Jan Pieter and Marijnissen, Jan C. M.. (2006) Nano-dispensing by electrospray for biotechnology. Biotechnology journal, 1 (9). pp. 969-975.

Schaffitzel, C. and Oswald, M. and Berger, I. and Ishikawa, T. and Abrahams, J. P. and Koerten, H. K. and Koning, R. I. and Ban, N.. (2006) 2IY3: Structure of the E. Coli Signal Regognition Particle. Worldwide Protein Data Bank. 2IY3.

Thomassen, Ellen A. J. and van Veen, Harrie A. and van Berkel, Patrick H. C. and Nuijens, Jan H. and Abrahams, Jan Pieter. (2005) The protein structure of recombinant human lactoferrin produced in the milk of transgenic cows closely matches the structure of human milk-derived lactoferrin. Transgenic Research, 14 (4). pp. 397-405.

Ness, Steven R. and de Graaff, Rudolf A. G. and Abrahams, Jan Pieter and Pannu, Navraj S.. (2004) CRANK: new methods for automated macromolecular crystal structure solution. Structure, 12 (10). pp. 1753-1761.

van Roon, Anne-Marie M. and Bink, Hugo H. J. and Plaisier, Jasper R. and Pleij, Cornelis W. A. and Abrahams, Jan Pieter and Pannu, Navraj S.. (2004) Crystal structure of an empty capsid of turnip yellow mosaic virus. Journal of Molecular Biology, 341 (5). pp. 1205-1214.

Thomassen, Ellen A. J. and Pouvreau, Laurice and Gruppen, Harry and Abrahams, Jan Pieter. (2004) Crystallization and preliminary X-ray crystallographic studies on a Kunitz-type potato serine protease inhibitor. Acta Crystallographica. Section D, Biological Crystallography, 60 (Pt 8). pp. 1464-1466.

van Roon, Anne-Marie M. and Pannu, Navraj S. and de Vrind, Johannes P. M. and van der Marel, Gijs A. and van Boom, Jacques H. and Hokke, Cornelis H. and Deelder, André M. and Abrahams, Jan Pieter. (2004) Structure of an anti-Lewis X Fab fragment in complex with its Lewis X antigen. Structure, 12 (7). pp. 1227-1236.

Plaisier, J. R. and Koning, R. I. and Koerten, H. K. and van Heel, M. and Abrahams, J. P.. (2004) TYSON: robust searching, sorting, and selecting of single particles in electron micrographs. Journal of Structural Biology, 145 (1-2). pp. 76-83.

Bos, Ineke G. A. and Lubbers, Yvonne T. P. and Eldering, Eric and Abrahams, Jan Pieter and Hack, C. Erik. (2004) Effect of reactive site loop elongation on the inhibitory activity of C1-inhibitor. Biochimica et Biophysica Acta - Proteins and Proteomics, 1699 (1-2). pp. 139-144.

Leliveld, S. R. and Dame, R. T. and Rohn, J. L. and Noteborn, M. H. M. and Abrahams, J. P.. (2004) Apoptin's functional N- and C-termini independently bind DNA. FEBS Letters, 557 (1-3). pp. 155-158.

Van Roon, A. M. M. and Bink, H. H. J. and Plaisier, J. R. and Pleij, C. W. A. and Abrahams, J. P. and Pannu, N. S.. (2004) 1W39: Crystal Structure Of An Artificial Top Component Of Turnip Yellow Mosaic Virus. Worldwide Protein Data Bank. 1W39.

Van Roon, A. M. M. and Pannu, N. S. and De Vrind, J. P. M. and Hokke, C. H. and Deelder, A. M. and Van Der Marel, G. A. and Van Boom, J. H. and Abrahams, J. P.. (2004) 1UZ8: Anti-Lewis X Fab Fragment In Complex With Lewis X. Worldwide Protein Data Bank. 1UZ8.

Van Roon, A. M. M. and Pannu, N. S. and De Vrind, J. P. M. and Hokke, C. H. and Deelder, A. M. and Van Der Marel, G. A. and Van Boom, J. H. and Abrahams, J. P.. (2004) 1UZ6: Anti-Lewis X Fab Fragment Uncomplexed. Worldwide Protein Data Bank. 1UZ6.

Hilge, Mark and Siegal, Gregg and Vuister, Geerten W. and Güntert, Peter and Gloor, Sergio M. and Abrahams, Jan Pieter. (2003) ATP-induced conformational changes of the nucleotide-binding domain of Na,K-ATPase. Nature Structural Biology, 10 (6). pp. 468-474.

Zhang, Ying-Hui and Leliveld, S. Rutger and Kooistra, Klaas and Molenaar, Chris and Rohn, Jennifer L. and Tanke, Hans J. and Abrahams, Jan Pieter and Noteborn, Mathieu H. M.. (2003) Recombinant Apoptin multimers kill tumor cells but are nontoxic and epitope-shielded in a normal-cell-specific fashion. Experimental Cell Research, 289 (1). pp. 36-46.

Hilge, M. and Siegal, G. and Vuister, G. W. and Guentert, P. and Gloor, S. M. and Abrahams, J. P.. (2003) 1MO7: ATPase. Worldwide Protein Data Bank. 1MO7.

Hilge, M. and Siegal, G. and Vuister, G. W. and Guentert, P. and Gloor, S. M. and Abrahams, J. P.. (2003) 1MO8: ATPase. Worldwide Protein Data Bank. 1MO8.

Plaisier, J. R. and Koning, R. I. and Koerten, H. K. and van Roon, A. M. and Thomassen, E. A. J. and Kuil, M. E. and Hendrix, J. and Broennimann, C. and Pannu, N. S. and Abrahams, J. P.. (2003) Area detectors in structural biology. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 509 (1-3). pp. 274-282.

Leliveld, Sirik R. and Noteborn, Mathieu H. M. and Abrahams, Jan Pieter. (2003) Prevalent conformations and subunit exchange in the biologically active apoptin protein multimer. European Journal of Biochemistry, 270 (17). pp. 3619-3627.

Koning, Roman and van den Worm, Sjoerd and Plaisier, Jasper R. and van Duin, Jan and Abrahams, Jan Pieter and Koerten, Henk. (2003) Visualization by cryo-electron microscopy of genomic RNA that binds to the protein capsid inside bacteriophage MS2. Journal of Molecular Biology, 332 (2). pp. 415-422.

Thomassen, Ellen and Gielen, Geriit and Schutz, Michael and Schoehn, Guy and Abrahams, Jan Pieter and Miller, Stefan and van Raaij, Mark J.. (2003) The structure of the receptor-binding domain of the bacteriophage T4 short tail fibre reveals a knitted trimeric metal-binding fold. Journal of Molecular Biology, 331 (2). pp. 361-373.

Bos, Ineke G. A. and Lubbers, Yvonne T. P. and Roem, Dorina and Abrahams, Jan Pieter and Hack, C. Erik and Eldering, Eric. (2003) The functional integrity of the serpin domain of C1-inhibitor depends on the unique N-terminal domain, as revealed by a pathological mutant. Journal of Biological Chemistry, 278 (32). pp. 29463-29470.

Leliveld, Sirik R. and Dame, Remus T. and Mommaas, Mieke A. and Koerten, Henk K. and Wyman, Claire and Danen-van Oorschot, Astrid A. A. M. and Rohn, Jennifer L. and Noteborn, Mathieu H. M. and Abrahams, Jan Pieter. (2003) Apoptin protein multimers form distinct higher-order nucleoprotein complexes with DNA. Nucleic Acids Research, 31 (16). pp. 4805-4813.

Danen-van Oorschot, Astrid A. A. M. and Zhang, Ying-Hui and Leliveld, S. Rutger and Rohn, Jennifer L. and Seelen, Maud C. M. J. and Bolk, Marian W. and van Zon, Arend and Erkeland, Stefan J. and Abrahams, Jan-Pieter and Mumberg, Dominik and Noteborn, Mathieu H. M.. (2003) Importance of nuclear localization of apoptin for tumor-specific induction of apoptosis. Journal of Biological Chemistry, 278 (30). pp. 27729-27736.

van Roon, A. M. M. and Pannu, N. S. and Hokke, C. H. and Deelder, A. M. and Abrahams, J. P.. (2003) Crystallization and preliminary X-ray analysis of an anti-LewisX Fab fragment with and without its LewisX antigen. Acta Crystallographica Section D, 59. pp. 1306-1309.

Abrahams, Jan Pieter and Thomassen, Ellen A. J.. (2003) Mechanism of thrombin's enigmatic sodium switch revealed. Structure, 11 (4). pp. 363-364.

Leliveld, Sirik R. and Zhang, Ying-Hui and Rohn, Jennifer L. and Noteborn, Mathieu H. M. and Abrahams, Jan Pieter. (2003) Apoptin induces tumor-specific apoptosis as a globular multimer. Journal of Biological Chemistry, 278 (11). pp. 9042-9051.

McCoy, Airlie J. and Pei, Xue Y. and Skinner, Richard and Abrahams, Jan-Pieter and Carrell, Robin W.. (2003) Structure of beta-antithrombin and the effect of glycosylation on antithrombin's heparin affinity and activity. Journal of Molecular Biology, 326 (3). pp. 823-833.

Bos, Ineke G. A. and Hack, C. Erik and Abrahams, Jan Pieter. (2002) Structural and functional aspects of C1-Inhibitor. Immunobiology, 205 (4-5). pp. 518-533.

Schmauder, R. and Schmidt, T. and Abrahams, J. P. and Kuil, M. E.. (2002) Screening crystallisation conditions using fluorescence correlation spectroscopy. Acta Crystallographica Section D: Structural Biology, 58. pp. 1536-1541.

Kuil, Maxim E. and Bodenstaff, E. René and Hoedemaeker, Flip J. and Abrahams, Jan Pieter. (2002) Protein nano-crystallogenesis. Enzyme and Microbial Technology, 30 (3). pp. 262-265.

Bodenstaff, E. R. and Hoedemaeker, F. J. and Kuil, M. E. and de Vrind, H. P. M. and Abrahams, J. P.. (2002) The prospects of protein nanocrystallography. Acta Crystallographica. Section D, Biological Crystallography, 58. pp. 1901-1906.

Hoedemaeker, F. J. and Visschers, R. W. and Alting, A. C. and de Kruif, K. G. and Kuil, M. E. and Abrahams, J. P.. (2002) A novel pH-dependent dimerization motif in beta-lactoglobulin from pig (Sus scrofa). Acta Crystallographica. Section D, Biological Crystallography, 58. pp. 480-486.

de Graaff, R. A. G. and Hilge, M. and van der Plas, J. L. and Abrahams, J. P.. (2001) Matrix methods for solving protein substructures of chlorine and sulfur from anomalous data. Acta Crystallographica. Section D, Biological Crystallography, 57. pp. 1857-1862.

Hilge, M. and Perrakis, A. and Abrahams, J. P. and Winterhalter, K. and Piontek, K. and Gloor, S. M.. (2001) Structure elucidation of beta-mannanase: from the electron-density map to the DNA sequence. Acta Crystallographica. Section D, Biological Crystallography, 57. pp. 37-43.

Abrahams, J. P. and Hoedemaeker, F. J.. (2000) 1EXS: Structure Of Porcine Beta-Lactoglobulin. Worldwide Protein Data Bank. 1EXS.

McCoy, A. J. and Skinner, R. and Abrahams, J.-P. and Pei, X. Y. and Carrell, R. W.. (2000) 1E05: Plasma Alpha Antithrombin-Iii. Worldwide Protein Data Bank. 1E05.

McCoy, A. J. and Jin, L. and Abrahams, J.-P. and Skinner, R. and Carrell, R. W.. (2000) 1E03: Plasma Alpha Antithrombin-Iii And Pentasaccharide. Worldwide Protein Data Bank. 1E03.

McCoy, A. J. and Skinner, R. and Abrahams, J.-P. and Pei, X. Y. and Carrell, R. W.. (2000) 1E04: Plasma Beta Antithrombin-Iii. Worldwide Protein Data Bank. 1E04.

Hoedemaeker, Flip J. and Siegal, Gregg and Roe, S. Mark and Driscoll, Paul C. and Abrahams, Jan Pieter. (1999) Crystal structure of the C-terminal SH2 domain of the p85 alpha regulatory subunit of phosphoinositide 3-kinase: An SH2 domain mimicking its own substrate. Journal of Molecular Biology, 292 (4). pp. 763-770.

Jin, L. and Abrahams, J. P. and Skinner, R. and Petitou, M. and Pike, R. N. and Carrell, R. W.. (1999) 1AZX: Antithrombin/Pentasaccharide Complex. Worldwide Protein Data Bank. 1AZX.

Hoedemaeker, F. J. and Siegal, G. and Roe, S. M. and Driscoll, P. C. and Abrahams, J. P.. (1999) Crystal structure of the C-terminal SH2 domain of the p85 alpha regulatory subunit of phosphoinositide 3-kinase: An SH2 domain mimicking its own substrate (vol 292, pg 763, 1999). Journal of Molecular Biology, 294 (3). p. 825.

Leslie, A. G. W. and Abrahams, J. P. and Braig, K. and Lutter, R. and Menz, R. I. and Orriss, G. L. and van Raaij, M. J. and Walker, J. E.. (1999) The structure of bovine mitochondrial F-1-ATPase: an example of rotary catalysis. Biochemical Society Transactions, 27 (2). pp. 37-42.

Abrahams, J. P. and De Graaff, R. A. G.. (1998) New developments in phase refinement. Current Opinion in Structural Biology, 8 (5). pp. 601-605.

Skinner, R. and Chang, W. S. W. and Jin, L. and Pei, X. Y. and Huntington, J. A. and Abrahams, J. P. and Carrell, R. W. and Lomas, D. A.. (1998) 1BR8: Implications For Function And Therapy Of A 2.9A Structure Of Binary-Complexed Antithrombin. Worldwide Protein Data Bank. 1BR8.

Shirakihara, Y. and Leslie, A. G. W. and Abrahams, J. P. and Walker, J. E. and Ueda, T. and Sekimoto, Y. and Kambara, M. and Saika, K. and Kagawa, Y. and Yoshida, M.. (1998) 1SKY: Crystal Structure Of The Nucleotide Free Alpha3beta3 Sub-Complex Of F1-Atpase From The Thermophilic Bacillus Ps3. Worldwide Protein Data Bank. 1SKY.

Elliott, Peter R. and Abrahams, Jan-Pieter and Lomas, David A.. (1998) Wild-type alpha(1)-antitrypsin is in the canonical inhibitory conformation. Journal of Molecular Biology, 275 (3). pp. 419-425.

Skinner, Richard and Chang, Wun-Shaing W. and Jin, Lei and Pei, Xue and Huntington, James A. and Abrahams, Jan-Pieter and Carrell, Robin W. and Lomas, David A.. (1998) Implications for function and therapy of a 2.9 å structure of binary-complexed antithrombin. Journal of Molecular Biology, 283 (1). pp. 9-14.

Abrahams, J. P.. (1997) Bias reduction in phase refinement by modified interference functions: Introducing the gamma correction. Acta Crystallographica. Section D, Biological Crystallography, 53. pp. 371-376.

Skinner, R. and Abrahams, J.-P. and Whisstock, J. C. and Lesk, A. M. and Carrell, R. W. and Wardell, M. R.. (1997) 2ANT: The 2.6 A Structure Of Antithrombin Indicates A Conformational Change At The Heparin Binding Site. Worldwide Protein Data Bank. 2ANT.

Abrahams, J. P. and Buchanan, S. K. and Van Raaij, M. J. and Fearnley, I. M. and Leslie, A. G. W. and Walker, J. E.. (1997) 1EFR: Bovine Mitochondrial F1-Atpase Complexed With The Peptide Antibiotic Efrapeptin. Worldwide Protein Data Bank. 1EFR.

Jin, Lei and Abrahams, Jan Pieter and Skinner, Richard and Petitou, Maurice and Pike, Robert N. and Carrell, Robin W.. (1997) The anticoagulant activation of antithrombin by heparin. Proceedings of the National Academy of Sciences of the United States of America, 94 (26). pp. 14683-14688.

Skinner, Richard and Abrahams, Jan-Pieter and Whisstock, James C. and Lesk, Arthur M. and Carrell, Robin W. and Wardell, Mark R.. (1997) The 2.6 Å structure of antithrombin indicates a conformational change at the heparin binding site. Journal of Molecular Biology, 266 (3). pp. 601-609.

Shirakihara, Yasuo and Leslie, Andrew G. W. and Abrahams, Jan Pieter and Walker, John E. and Ueda, Takashi and Sekimoto, Yoshinori and Kambara, Minoru and Saika, Kouji and Kagawa, Yasuo and Yoshida, Masasuke. (1997) The crystal structure of the nucleotide-free alpha 3 beta 3 subcomplex of F-1-ATPase from the thermophilic Bacillus PS3 is a symmetric trimer. Structure, 5 (6). pp. 825-836.

Wardell, M. R. and Skinner, R. and Carter, D. C. and Twigg, P. D. and Abrahams, J. P.. (1997) Improved diffraction of antithrombin crystals grown in microgravity. Acta Crystallographica. Section D, Biological Crystallography, 53. pp. 622-625.

Carrell, R. and Skinner, R. and Jin, L. and Abrahams, J. P.. (1997) Structural mobility of antithrombin and its modulation by heparin. Thrombosis and Haemostasis, 78 (1). pp. 516-519.

Elliott, Peter R. and Lomas, David A. and Carrell, Robin W. and Abrahams, Jan Pieter. (1996) Inhibitory conformation of the reactive loop of alpha(1)-antitrypsin. Nature Structural biology, 3 (8). pp. 676-681.

Abrahams, J. P. and Elliott, P. R. and Lomas, D. A. and Carrell, R. W.. (1996) 1PSI: Intact recombined alpha1-antitrypsin mutant PHE 51 to LEU. Worldwide Protein Data Bank. 1PSI.

Van Raaij, M. and Abrahams, J. P. and Leslie, A. G. W. and Walker, J. E.. (1996) 1COW: Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B. Worldwide Protein Data Bank. 1COW.

Abrahams, J. P. and Leslie, A. G. W. and Lutter, R. and Walker, J. E.. (1996) 1BMF: Bovine Mitochondrial F1-Atpase. Worldwide Protein Data Bank. 1BMF.

Abrahams, J. P. and Leslie, A. G. W.. (1996) Methods used in the structure determination of bovine mitochondrial F-1 ATPase. Acta Crystallographica. Section D, Biological Crystallography, 52. pp. 30-42.

van Raaij, M. J. and Abrahams, J. P. and Leslie, A. G. W. and Walker, J. E.. (1996) The structure of bovine F-1-ATPase complexed with the antibiotic inhibitor aurovertin B. Proceedings of the National Academy of Sciences of the United States of America, 93 (14). pp. 6913-6917.

Abrahams, Jan Pieter and Buchanan, Susan K. and van Raaij, Mark J. and Fearnley, Ian M. and Leslie, Andrew G. W. and Walker, John E.. (1996) The structure of bovine F-1-ATPase complexed with the peptide antibiotic efrapeptin. Proceedings of the National Academy of Sciences of the United States of America, 93 (18). pp. 9420-9424.

Abrahams, Jan Pieter and Leslie, Andrew G. W. and Lutter, René and Walker, John E.. (1994) Structure at 2.8 Â resolution of F1-ATPase from bovine heart mitochondria. Nature, 370 (6491). pp. 621-628.

Abrahams, J. P. and Lutter, R. and Todd, R. J. and Van Raaij, M. J. and Leslie, A. G. W. and Walker, J. E.. (1993) Inherent asymmetry of the structure of F1‐ATPase from bovine heart mitochondria at 6.5 A resolution. The EMBO journal, 12 (5). pp. 1775-1780.

Wardell, Mark R. and Abrahams, Jan-Pieter and Bruce, David and Skinner, Richard and Leslie, Andrew G. W.. (1993) Crystallization and Preliminary X-ray Diffraction Analysis of Two Conformations of Intact Human Antithrombin. Journal of Molecular Biology, 234 (4). pp. 1253-1258.

Lutter, R. and Abrahams, J. P. and Van Raaij, M. J. and Todd, R. J. and Lundqvist, T. and Buchanan, S. K. and Leslie, A. G. W. and Walker, J. E.. (1993) Crystallization of F1-ATPase from Bovine Heart Mitochondria. Journal of Molecular Biology, 229 (3). pp. 787-790.

Abrahams, Jan Pieter and Bosch, Leendert and Kraal, Barend and De Groot, Huub J. M. and Raap, Jan and Lugtenburg, Johan. (1992) Magic angle spinning carbon-13 NMR analysis of the complex of elongation factor Tu, GTP and (1-carbon-13) phenylalanyl-tRNA-Phe. Spectroscopy (Amsterdam), 10 (1-6). pp. 1-8.

Abrahams, Jan Pieter and Kraal, Barend and Clark, Brian F. C. and Bosch, Leendert. (1991) Isolation and stability of ternary complexes of elongation factor Tu, GTP and aminoacyl-tRNA. Nucleic Acids Research, 19 (3). pp. 553-556.

Abrahams, Jan Pieter and Acampo, J. J. C. and Kraal, B. and Bosch, L.. (1991) The influence of tRNA located at the P-site on the turnover of EF-Tu·GTP on ribosomes. Biochimie, 73 (7-8). pp. 1089-1092.

Abrahams, Jan Pieter and Van Raaij, Mark. J. and Ott, Guenther and Kraal, Barend and Bosch, Leendert. (1991) Kirromycin drastically reduces the affinity of Escherichia coli elongation factor Tu for aminoacyl-tRNA. Biochemistry, 30 (27). pp. 6705-6710.

Abrahams, Jan Pieter and Acampo, Jeannine J. C. and Ott, Günther and Sprinzl, Mathias and Degraaf, J. Martien and Talens, Anneke and Kraal, Barend. (1990) THE INTERACTION BETWEEN AMINOACYL-TRANSFER RNA AND THE MUTANT ELONGATION FACTOR-TUAR AND FACTOR-TUBO. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, 1050 (1-3). pp. 226-229.

Abrahams, Jan Pieter and Vandenberg, Mirjam and Van Batenburg, Eke and Pleij, Cornells. (1990) Prediction of RNA secondary structure, including pseudoknotting, by computer simulation. Nucleic Acids Research, 18 (10). pp. 3035-3044.

Abrahams, Jan Pieter and Kraal, Barend and Bosch, Leendert. (1988) Zone-interference gel electrophoresis: a new method for studying weak protein-nucleic acid complexes under native equilibrium conditions. Nucleic Acids Research, 16 (21). pp. 10099-10108.

Van Belkum, Alex and Abrahams, Jan Pieter and Pleij, Cornelius W. A. and Bosch, Leendert. (1985) Five pseudoknots are present at the 204 nucleotides long 3' noncoding region of tobacco mosak virus RNA. Nucleic Acids Research, 13 (21). pp. 7673-7686.

Conference or Workshop Item

Sikharulidze, I. and Van Gastel, R. and Schramm, S. and Abrahams, J. P. and Poelsema, B. and Trom, R. M. and Van der Molen, S. J.. (2010) Improved Imaging in low Energy Electron Microscopy and Photo Emission Electron Microscopy Using Medipix2 Pixel Detector. In: Astroparticle, Particle and Space Physics, Detectors and Medical Physics Applications. Proceedings of the 11th Conference, Villa Olmo, Como, Italy, 5-9 October 2009. Singapore, pp. 133-139.

Jiang, Linhua and Georgieva, Dilyana and IJspeert, Kim and Abrahams, Jan Pieter. (2009) An intelligent peak search program for digital electron diffraction images of 3D nano-crystals. In: 2009 2nd International Congress on Image and Signal Processing. pp. 1-5.

Kraal, B. and Abrahams, J. P. and Bosch, L.. (1989) Effects Of Kirromycin On The Elongation Factor-Ef-Tu And Its Interactions With Gdp Or Gtp And Transfer-Rna - The Application Of Zone-Interference Gel-Electrophoresis, A New Method For The Analysis Of Weak Complexes. In: The guanine-nucleotide binding proteins. Common structural and functional properties, 165. New York, pp. 121-129.

Preprint

Matz, Joachim M. and Drepper, Benjamin and Blum, Thorsten B. and van Genderen, Eric and Burrell, Alana and Martin, Peer and Stach, Thomas and Collinson, Lucy and Abrahams, Jan Pieter and Matuschewski, Kai and Blackman, Michael J.. (2020) A lipocalin mediates unidirectional haem biomineralization in malaria parasites. bioRxiv.

Working Paper

Blum, Thorsten B. and Housset, Dominique and Clabbers, Max T. B. and van Genderen, Eric and Bacia-Verloop, Maria and Zander, Ulrich and McCarthy, Andrew A. and Schoehn, Guy and Li Ling, Wai and Abrahams, Jan Pieter. (2020) Statistically correcting dynamical electron scattering improves refinement of protein nanocrystals, including charge refinement of coordinated metals.

Other

Wallin, Cecilia and Hiruma, Yoshitaka and Warmlander, Sebastian and Huvent, Isabelle and Jarvet, Juri and Abrahams, Jan Pieter and Graslund, Astrid and Lippens, Guy and Luo, Jinghui. (2019) The Neuronal Tau Protein Blocks In Vitro Fibrillation of the Amyloid-beta (A beta) Peptide. Biophysical Journal, 116 (3, Supplement 1). 306a.

Abrahams, Jan Pieter and Clabbers, Max and van Genderen, Eric and Blum, Thorsten. (2018) Electron tomography of radiation sensitive 3D nano-crystals in imaging and diffraction mode. Acta Crystallographica A-Foundation And Advances, 74. E83.

Clabbers, Max and Gruene, Tim and van Genderen, Eric and Abrahams, Jan Pieter. (2018) Experimental and computational reduction of dynamical electron scattering allows visualizing individual hydrogen atoms. Acta Crystallographica A-Foundation And Advances, 74. E426.

Abrahams, Jan Pieter and van Genderent, Eric and Nederlof, Igor and Clabbers, Max and Li, Yaowang. (2015) Electron diffraction and imaging of 3D nanocrystals of pharmaceuticals, peptides and proteins. Acta Crystallographica A-Foundation And Advances, 71. S103.

Clabbers, Max T. B. and van Genderen, Eric and Nederlof, Igor and Li, Yao-Wang and Abrahams, Jan Pieter. (2015) Electron crystallography of 3D nano-crystals. Acta Crystallographica A-Foundation And Advances, 71. S405.

Luo, Jinghui and Yu, Chien-Hung and Yu, Huixin and Borstnar, Rok and Kamerlin, Shina C. L. and Gräslund, Astrid and Abrahams, Jan Pieter and Wärmländer, Sebastian K. T. S.. (2013) Cellular Polyamines Promote Amyloid-Beta Peptide Fibrillation and Modulate the Aggregation Pathways. Biophysical Journal, 104 (2). 389A.

Nicolopoulos, Stavros and Rauch, Edgar and Georgieva, D. and Abrahams, J. P.. (2011) Low resolution electron crystallography challenges in organic and inorganic crystals with transmission electron microscope (TEM). Acta Crystallographica A-Foundation And Advances, 67. C188.

Waterreus, Willem-Jan and Skubák, Pavol and Sikharulidze, Irakli and Abrahams, Jan Pieter and de Graaff, Rudolf A. G. and Pannu, Navraj S.. (2011) Advances in the CRANK software suite for automated crystal structure solution. Acta Crystallographica A-Foundation And Advances, 67. C659.

Nederlof, Igor and Georgieva, Dilyana and Abrahams, Jan Pieter. (2011) Electron diffraction of submicron 3D protein crystals. Acta Crystallographica A-Foundation And Advances, 67. C228.

Waterreus, Willem-Jan and Pannu, Navraj and Skubák, Pavol and Sikharulidze, Irakli and Abrahams, Jan Pieter and de Graaff, R. A. G.. (2009) Recent Advances in CRANK. Acta Crystallographica A-Foundation And Advances, 65. S160.

Abrahams, Jan Pieter and Jiang, Linhua and Sikhuralidze, Irakli and Nederloff, Igor and Zandbergen, Henny and Georgieva, Dilyana. (2009) Macromolecular Electron Crystallography. Acta Crystallographica A-Foundation And Advances, 65. S7.

Abrahams, Jan Pieter and Georgieva, Dilyana and Jiang, Linhua and Zandbergen, Henny W.. (2008) Prospects for structure solution by electron diffraction of three-dimensional protein crystals. Acta Crystallographica A-Foundation And Advances, 64. C75-C76.

Schmauder, R. and van Rijn, R. and Abrahams, J. P. and Kuil, M. E. and Schmidt, T.. (2005) FCS in non-ideal solutions. Biophysical Journal, 88 (1). 655A.

Ness, Steven R. and de Graaff, R. A. G. and Abrahams, Jan Pieter and Pannu, Navraj S.. (2004) CRANK - New Methods for Automated Structure Solution. Acta Crystallographica A-Foundation And Advances, 60. S16.

Pei, X. Y. and Skinner, R. and Abrahams, J. P. and Carrell, R. W.. (1999) 2.6A Structure Of Preferentially Active Isoform Of Human Antithrombin. Acta Crystallographica A-Foundation And Advances, 55 (Supplement). p. 367.

Elliott, P. R. and Abrahams, J. P. and Lomas, D. A.. (1999) Crystal structure of wildtype alpha(1)-antitrypsin. American Journal Of Respiratory And Critical Care Medicine, 159 (3). A192.

Leslie, A. G. W. and Abrahams, J. P. and van Raaij, M. and Lutter, R. and Walker, J. E.. (1996) The structure of bovine mitochondrial F1-ATPase - an example of rotational catalysis? Acta Crystallographica A-Foundation And Advances, 52. C3.

Abrahams, J. P. and Leslie, A. G. W. and Lutter, R. and Walker, J. E.. (1996) The structure of bovine mitochondrial F1-ATPase - An insight into ATP synthesis. Biophysical Journal, 70 (2, Part 2). A121.

Pleij, C. W. A. and Abrahams, Jan Pieter and Van Belkum, Alex and Rietveld, Krijn and Bosch, Leendert. (1986) The Spatial Folding Of The 3' Noncoding Region Of Aminoacylatable Plant Viral RNAs. Journal of Cellular Biochemistry, 32 (10D). p. 274.