Items where Division is "09 Associated Institutions > Swiss Tropical and Public Health Institute (Swiss TPH) > Department of Medical Parasitology and Infection Biology (MPI) > Clinical Immunology (Daubenberger)"

2024

Stabler, Thomas Carl. Using whole Plasmodium falciparum genomes for monitoring of escape from diagnosis, drug treatment and vaccine-induced immunity in Central-West Africa. 2024, Doctoral Thesis, University of Basel, Associated Institution, Faculty of Science.

2023

Abukhattab, S. and Hosch, S. and Abu-Rmeileh, N. M. E. and Hasan, S. and Vonaesch, P. and Crump, L. and Hattendorf, J. and Daubenberger, C. and Zinsstag, J. and Schindler, T.. (2023) Whole-genome sequencing for One Health surveillance of antimicrobial resistance in conflict zones: a case study of Salmonella spp. and Campylobacter spp. in the West Bank, Palestine. Applied and environmental microbiology, 89 (9). e00658-23.

Bechtold, P. and Wagner, P. and Hosch, S. and Gregorini, M. and Stark, W. J. and Gody, J. C. and Kodia-Lenguetama, E. R. and Pagonendji, M. S. and Donfack, O. T. and Phiri, W. P. and García, G. A. and Nsanzanbana, C. and Daubenberger, C. A. and Schindler, T. and Vickos, U.. (2023) Development and evaluation of PlasmoPod: a cartridge-based nucleic acid amplification test for rapid malaria diagnosis and surveillance. PLOS Glob Public Health, 3 (9). e0001516.

Daubenberger, C.. (2023) Genetically modified malaria parasites as vaccine candidates. Trends in molecular medicine, 29 (1). pp. 1-3.

García, G. A. and Janko, M. and Hergott, D. E. B. and Donfack, O. T. and Smith, J. M. and Mba Eyono, J. N. and DeBoer, K. R. and Nguema Avue, R. M. and Phiri, W. P. and Aldrich, E. M. and Schwabe, C. and Stabler, T. C. and Rivas, M. R. and Cameron, E. and Guerra, C. A. and Cook, J. and Kleinschmidt, I. and Bradley, J.. (2023) Identifying individual, household and environmental risk factors for malaria infection on Bioko Island to inform interventions. Malar J, 22. p. 72.

Hosch, Salome. Investigating drug resistance markers, evolution and co-infections of pathogens of public health concern using portable molecular detection and sequencing tools. 2023, Doctoral Thesis, University of Basel, Associated Institution, Faculty of Science.

Jongo, S. A. and Urbano Nsue Ndong Nchama, V. and Church, L. W. P. and Olotu, A. and Manock, S. R. and Schindler, T. and Mtoro, A. and Kc, N. and Devinsky, O. and Zan, E. and Hamad, A. and Nyakarungu, E. and Mpina, M. and Deal, A. and Bijeri, J. R. and Ondo Mangue, M. E. and Ntutumu Pasialo, B. E. and Nguema, G. N. and Rivas, M. R. and Chemba, M. and Ramadhani, K. K. and James, E. R. and Stabler, T. C. and Abebe, Y. and Riyahi, P. and Saverino, E. S. and Sax, J. and Hosch, S. and Tumbo, A. and Gondwe, L. and Segura, J. L. and Falla, C. C. and Phiri, W. P. and Hergott, D. E. B. and García, G. A. and Maas, C. and Murshedkar, T. and Billingsley, P. F. and Tanner, M. and Ayekaba, M. O. and Sim, B. K. L. and Daubenberger, C. and Richie, T. L. and Abdulla, S. and Hoffman, S. L.. (2023) Safety and immunogenicity of radiation-attenuated PfSPZ vaccine in equatoguinean infants, children, and adults. The American journal of tropical medicine and hygiene, 109 (1). pp. 138-146.

Yoboue, Aya Charlene. Molecular epidemiology of Mansonella perstans on Bioko Island: identification of risk factors, co-infection with malaria and Loa loa and impact in pregnant women. 2023, Doctoral Thesis, University of Basel, Associated Institution, Faculty of Science.

2022

Caduff, L. and Dreifuss, D. and Schindler, T. and Devaux, A. J. and Ganesanandamoorthy, P. and Kull, A. and Stachler, E. and Fernandez-Cassi, X. and Beerenwinkel, N. and Kohn, T. and Ort, C. and Julian, T. R.. (2022) Inferring transmission fitness advantage of SARS-CoV-2 variants of concern from wastewater samples using digital PCR, Switzerland, December 2020 through March 2021. Euro Surveill, 27 (10). p. 2100806.

Daubenberger, C.. (2022) Assessment of experimental malaria vaccine induced protection in pre-exposed populations. The Lancet infectious diseases, 22 (3). pp. 305-307.

Daubenberger, C. and Burrows, J. N.. (2022) Volunteer infection studies accelerate the clinical development of novel drugs against malaria. The Lancet infectious diseases, 22. pp. 753-754.

Daubenberger, C. A. and Gupta, R.. (2022) Monoclonal antibodies for reducing malaria transmission. The Lancet infectious diseases, 22 (11). pp. 1519-1520.

Daubenberger, C. A. and Moncunill, G.. (2022) Next-generation malaria subunit vaccines to reduce disease burden in African children. The Lancet infectious diseases, 22 (11). pp. 1655-1656.

Hosch, S. and Mpina, M. and Nyakurungu, E. and Silochi Borico, N. and Obama, T. M. A. and Ovona, M. C. and Wagner, P. and Rubin, S. E. and Vickos, U. and Milang, D. V. N. and Ondo'o Ayekaba, M. and Phiri, W. P. and Daubenberger, C. A. and Schindler, T.. (2022) Genomic surveillance enables the identification of co-infections with multiple SARS-CoV-2 lineages in equatorial Guinea. Front Public Health, 9. p. 818401.

Hosch, S. and Yoboue, C. A. and Donfack, O. T. and Guirou, E. A. and Dangy, J. P. and Mpina, M. and Nyakurungu, E. and Blöchliger, K. and Guerra, C. A. and Phiri, W. P. and Ayekaba, M. O. and García, G. A. and Tanner, M. and Daubenberger, C. and Schindler, T.. (2022) Analysis of nucleic acids extracted from rapid diagnostic tests reveals a significant proportion of false positive test results associated with recent malaria treatment. Malar J, 21. p. 23.

Jongo, S. A. and Church, L. W. P. and Nchama, Vunn and Hamad, A. and Chuquiyauri, R. and Kassim, K. R. and Athuman, T. and Deal, A. and Natasha, K. C. and Mtoro, A. and Mpina, M. and Nyakarungu, E. and Bidjimi, G. O. and Owono, M. A. and Maye, E. R. M. and Mangue, M. E. O. and Okomo, G. N. N. and Pasialo, B. E. N. and Mandumbi, D. M. O. and Mikue, M. A. L. and Mochomuemue, F. L. and Obono, M. O. and Besaha, J. C. M. and Bijeri, J. R. and Abegue, G. M. and Veri, Y. R. and Bela, I. T. and Chochi, F. C. and Lima Sánchez, J. E. and Pencelli, V. and Gayozo, G. and Nlang, Jaem and Schindler, T. and James, E. R. and Abebe, Y. and Lemiale, L. and Stabler, T. C. and Murshedkar, T. and Chen, M. C. and Schwabe, C. and Ratsirarson, J. and Rivas, M. R. and Ayekaba, M. O. and Milang, D. V. N. and Falla, C. C. and Phiri, W. P. and Garcia, G. A. and Maas, C. D. and Nlavo, B. M. and Tanner, M. and Billingsley, P. F. and Kim Lee Sim, B. and Daubenberger, C. and Hoffman, S. L. and Abdulla, S. and Richie, T. L.. (2022) Multi-dose priming regimens of PfSPZ vaccine: safety and efficacy against controlled human malaria infection in Equatoguinean adults. Am J Trop Med Hyg, 106 (4). pp. 1215-1226.

Kc, N. and Church, L. W. P. and Riyahi, P. and Chakravarty, S. and Seder, R. A. and Epstein, J. E. and Lyke, K. E. and Mordmüller, B. and Kremsner, P. G. and Sissoko, M. S. and Healy, S. and Duffy, P. E. and Jongo, S. A. and Nchama, Vunn and Abdulla, S. and Mpina, M. and Sirima, S. B. and Laurens, M. B. and Steinhardt, L. C. and Oneko, M. and Li, M. and Murshedkar, T. and Billingsley, P. F. and Sim, B. K. L. and Richie, T. L. and Hoffman, S. L.. (2022) Increased levels of anti-PfCSP antibodies in post-pubertal females versus males immunized with PfSPZ Vaccine does not translate into increased protective efficacy. Front Immunol, 13. p. 1006716.

Keller, Ladina. Improved treatment options for the control of soil-transmitted helminthiasis : from repurposed drugs to reinfection patterns. 2022, Doctoral Thesis, University of Basel, Associated Institution, Faculty of Science.

Lebedin, M. and Foglierini, M. and Khorkova, S. and Vázquez García, C. and Ratswohl, C. and Davydov, A. N. and Turchaninova, M. A. and Daubenberger, C. and Chudakov, D. M. and Lanzavecchia, A. and de la Rosa, K.. (2022) Different classes of genomic inserts contribute to human antibody diversity. Proc Natl Acad Sci U S A, 119 (36). e2205470119.

Macià, D. and Campo, J. J. and Moncunill, G. and Jairoce, C. and Nhabomba, A. J. and Mpina, M. and Sorgho, H. and Dosoo, D. and Traore, O. and Kusi, K. A. and Williams, N. A. and Oberai, A. and Randall, A. and Sanz, H. and Valim, C. and Asante, K. P. and Owusu-Agyei, S. and Tinto, H. and Agnandji, S. T. and Kariuki, S. and Gyan, B. and Daubenberger, C. and Mordmuller, B. and Petrone, P. and Dobaño, C.. (2022) Strong off-target antibody reactivity to malarial antigens induced by RTS,S/AS01E vaccination is associated with protection. JCI Insight, 7 (10). e158030.

Manock, S. R. and Nsue, V. U. and Olotu, A. and Mpina, M. and Nyakarungu, E. and Raso, J. and Mtoro, A. and Ondo Mangue, M. E. and Ntutumu Pasialo, B. E. and Nguema, R. and Riyahi, P. and Schindler, T. and Daubenberger, C. and Church, L. W. P. and Billingsley, P. F. and Richie, T. L. and Abdulla, S. and Hoffman, S. L.. (2022) The impact of Loa loa microfilaraemia on research subject retention during a whole sporozoite malaria vaccine trial in Equatorial Guinea. Trans R Soc Trop Med Hyg, 116 (8). pp. 745-749.

Moncunill, G. and Carnes, J. and Chad Young, W. and Carpp, L. and De Rosa, S. and Campo, J. J. and Nhabomba, A. and Mpina, M. and Jairoce, C. and Finak, G. and Haas, P. and Muriel, C. and Van, P. and Sanz, H. and Dutta, S. and Mordmüller, B. and Agnandji, S. T. and Díez-Padrisa, N. and Williams, N. A. and Aponte, J. J. and Valim, C. and Neafsey, D. E. and Daubenberger, C. and McElrath, M. J. and Dobaño, C. and Stuart, K. and Gottardo, R.. (2022) Transcriptional correlates of malaria in RTS,S/AS01-vaccinated African children: a matched case-control study. eLife, 11. e70393.

Mpina, M. and Stabler, T. C. and Schindler, T. and Raso, J. and Deal, A. and Acuche Pupu, L. and Nyakarungu, E. and Del Carmen Ovono Davis, M. and Urbano, V. and Mtoro, A. and Hamad, A. and Lopez, M. S. A. and Pasialo, B. and Eyang, M. A. O. and Rivas, M. R. and Falla, C. C. and Garcia, G. A. and Momo, J. C. and Chuquiyauri, R. and Saverino, E. and Preston Church, L. W. and Kim Lee Sim, B. and Manguire, B. and Tanner, M. and Maas, C. and Abdulla, S. and Billingsley, P. F. and Hoffman, S. L. and Jongo, S. and Richie, T. L. and Daubenberger, C. A.. (2022) Diagnostic performance and comparison of ultrasensitive and conventional rapid diagnostic test, thick blood smear and quantitative PCR for detection of low-density Plasmodium falciparum infections during a controlled human malaria infection study in Equatorial Guinea. Malar J, 21. p. 99.

Muñoz-Caro, T. and Machuca, A. and Morales, P. and Verdugo, J. and Reyes, R. and García, M. and Rutaihwa, L. and Schindler, T. and Poppert, S. and Taubert, A. and Hermosilla, C.. (2022) Prevalence and molecular identification of zoonotic Anisakis and Pseudoterranova species in fish destined to human consumption in Chile. Parasitology research, 121 (5). pp. 1295-1304.

Stabler, T. C. and Dwivedi, A. and Shrestha, B. and Joshi, S. and Schindler, T. and Ouattara, A. and García, G. A. and Daubenberger, C. and Silva, J. C.. (2022) Gene Coverage Count and Classification (GC3): a locus sequence coverage assessment tool using short-read whole genome sequencing data, and its application to identify and classify histidine-rich protein 2 and 3 deletions in Plasmodium falciparum. Malar J, 21. p. 357.

Tavares, W. and Morais, J. and Martins, J. F. and Scalsky, R. J. and Stabler, T. C. and Medeiros, M. M. and Fortes, F. J. and Arez, A. P. and Silva, J. C.. (2022) Malaria in Angola: recent progress, challenges and future opportunities using parasite demography studies. Malar J, 21. p. 396.

Tegally, H. and San, J. E. and Cotten, M. and Moir, M. and Tegomoh, B. and Mboowa, G. and Martin, D. P. and Baxter, C. and Lambisia, A. W. and Diallo, A. and Amoako, D. G. and Diagne, M. M. and Sisay, A. and Zekri, A. N. and Gueye, A. S. and Sangare, A. K. and Ouedraogo, A. S. and Sow, A. and Musa, A. O. and Sesay, A. K. and Abias, A. G. and Elzagheid, A. I. and Lagare, A. and Kemi, A. S. and Abar, A. E. and Johnson, A. A. and Fowotade, A. and Oluwapelumi, A. O. and Amuri, A. A. and Juru, A. and Kandeil, A. and Mostafa, A. and Rebai, A. and Sayed, A. and Kazeem, A. and Balde, A. and Christoffels, A. and Trotter, A. J. and Campbell, A. and Keita, A. K. and Kone, A. and Bouzid, A. and Souissi, A. and Agweyu, A. and Naguib, A. and Gutierrez, A. V. and Nkeshimana, A. and Page, A. J. and Yadouleton, A. and Vinze, A. and Happi, A. N. and Chouikha, A. and Iranzadeh, A. and Maharaj, A. and Batchi-Bouyou, A. L. and Ismail, A. and Sylverken, A. A. and Goba, A. and Femi, A. and Sijuwola, A. E. and Marycelin, B. and Salako, B. L. and Oderinde, B. S. and Bolajoko, B. and Diarra, B. and Herring, B. L. and Tsofa, B. and Lekana-Douki, B. and Mvula, B. and Njanpop-Lafourcade, B. M. and Marondera, B. T. and Khaireh, B. A. and Kouriba, B. and Adu, B. and Pool, B. and McInnis, B. and Brook, C. and Williamson, C. and Nduwimana, C. and Anscombe, C. and Pratt, C. B. and Scheepers, C. and Akoua-Koffi, C. G. and Agoti, C. N. and Mapanguy, C. M. and Loucoubar, C. and Onwuamah, C. K. and Ihekweazu, C. and Malaka, C. N. and Peyrefitte, C. and Grace, C. and Omoruyi, C. E. and Rafaï, C. D. and Morang'a, C. M. and Erameh, C. and Lule, D. B. and Bridges, D. J. and Mukadi-Bamuleka, D. and Park, D. and Rasmussen, D. A. and Baker, D. and Nokes, D. J. and Ssemwanga, D. and Tshiabuila, D. and Amuzu, D. S. Y. and Goedhals, D. and Grant, D. S. and Omuoyo, D. O. and Maruapula, D. and Wanjohi, D. W. and Foster-Nyarko, E. and Lusamaki, E. K. and Simulundu, E. and Ong'era, E. M. and Ngabana, E. N. and Abworo, E. O. and Otieno, E. and Shumba, E. and Barasa, E. and Ahmed, E. B. and Ahmed, E. A. and Lokilo, E. and Mukantwari, E. and Philomena, E. and Belarbi, E. and Simon-Loriere, E. and Anoh, E. A. and Manuel, E. and Leendertz, F. and Taweh, F. M. and Wasfi, F. and Abdelmoula, F. and Takawira, F. T. and Derrar, F. and Ajogbasile, F. V. and Treurnicht, F. and Onikepe, F. and Ntoumi, F. and Muyembe, F. M. and Ragomzingba, F. E. Z. and Dratibi, F. A. and Iyanu, F. A. and Mbunsu, G. K. and Thilliez, G. and Kay, G. L. and Akpede, G. O. and van Zyl, G. U. and Awandare, G. A. and Kpeli, G. S. and Schubert, G. and Maphalala, G. P. and Ranaivoson, H. C. and Omunakwe, H. E. and Onywera, H. and Abe, H. and Karray, H. and Nansumba, H. and Triki, H. and Kadjo, H. A. A. and Elgahzaly, H. and Gumbo, H. and Mathieu, H. and Kavunga-Membo, H. and Smeti, I. and Olawoye, I. B. and Adetifa, I. M. O. and Odia, I. and Ben Boubaker, I. B. and Mohammad, I. A. and Ssewanyana, I. and Wurie, I. and Konstantinus, I. S. and Halatoko, J. W. A. and Ayei, J. and Sonoo, J. and Makangara, J. C. and Tamfum, J. M. and Heraud, J. M. and Shaffer, J. G. and Giandhari, J. and Musyoki, J. and Nkurunziza, J. and Uwanibe, J. N. and Bhiman, J. N. and Yasuda, J. and Morais, J. and Kiconco, J. and Sandi, J. D. and Huddleston, J. and Odoom, J. K. and Morobe, J. M. and Gyapong, J. O. and Kayiwa, J. T. and Okolie, J. C. and Xavier, J. S. and Gyamfi, J. and Wamala, J. F. and Bonney, J. H. K. and Nyandwi, J. and Everatt, J. and Nakaseegu, J. and Ngoi, J. M. and Namulondo, J. and Oguzie, J. U. and Andeko, J. C. and Lutwama, J. J. and Mogga, J. J. H. and O'Grady, J. and Siddle, K. J. and Victoir, K. and Adeyemi, K. T. and Tumedi, K. A. and Carvalho, K. S. and Mohammed, K. S. and Dellagi, K. and Musonda, K. G. and Duedu, K. O. and Fki-Berrajah, L. and Singh, L. and Kepler, L. M. and Biscornet, L. and de Oliveira Martins, L. and Chabuka, L. and Olubayo, L. and Ojok, L. D. and Deng, L. L. and Ochola-Oyier, L. I. and Tyers, L. and Mine, M. and Ramuth, M. and Mastouri, M. and ElHefnawi, M. and Mbanne, M. and Matsheka, M. I. and Kebabonye, M. and Diop, M. and Momoh, M. and Lima Mendonça, M. D. L. and Venter, M. and Paye, M. F. and Faye, M. and Nyaga, M. M. and Mareka, M. and Damaris, M. M. and Mburu, M. W. and Mpina, M. G. and Owusu, M. and Wiley, M. R. and Tatfeng, M. Y. and Ayekaba, M. O. and Abouelhoda, M. and Beloufa, M. A. and Seadawy, M. G. and Khalifa, M. K. and Matobo, M. M. and Kane, M. and Salou, M. and Mbulawa, M. B. and Mwenda, M. and Allam, M. and Phan, M. V. T. and Abid, N. and Rujeni, N. and Abuzaid, N. and Ismael, N. and Elguindy, N. and Top, N. M. and Dia, N. and Mabunda, N. and Hsiao, N. Y. and Silochi, N. B. and Francisco, N. M. and Saasa, N. and Bbosa, N. and Murunga, N. and Gumede, N. and Wolter, N. and Sitharam, N. and Ndodo, N. and Ajayi, N. A. and Tordo, N. and Mbhele, N. and Razanajatovo, N. H. and Iguosadolo, N. and Mba, N. and Kingsley, O. C. and Sylvanus, O. and Femi, O. and Adewumi, O. M. and Testimony, O. and Ogunsanya, O. A. and Fakayode, O. and Ogah, O. E. and Oludayo, O. E. and Faye, O. and Smith-Lawrence, P. and Ondoa, P. and Combe, P. and Nabisubi, P. and Semanda, P. and Oluniyi, P. E. and Arnaldo, P. and Quashie, P. K. and Okokhere, P. O. and Bejon, P. and Dussart, P. and Bester, P. A. and Mbala, P. K. and Kaleebu, P. and Abechi, P. and El-Shesheny, R. and Joseph, R. and Aziz, R. K. and Essomba, R. G. and Ayivor-Djanie, R. and Njouom, R. and Phillips, R. O. and Gorman, R. and Kingsley, R. A. and Neto Rodrigues, Rmdesa and Audu, R. A. and Carr, R. A. A. and Gargouri, S. and Masmoudi, S. and Bootsma, S. and Sankhe, S. and Mohamed, S. I. and Femi, S. and Mhalla, S. and Hosch, S. and Kassim, S. K. and Metha, S. and Trabelsi, S. and Agwa, S. H. and Mwangi, S. W. and Doumbia, S. and Makiala-Mandanda, S. and Aryeetey, S. and Ahmed, S. S. and Ahmed, S. M. and Elhamoumi, S. and Moyo, S. and Lutucuta, S. and Gaseitsiwe, S. and Jalloh, S. and Andriamandimby, S. F. and Oguntope, S. and Grayo, S. and Lekana-Douki, S. and Prosolek, S. and Ouangraoua, S. and van Wyk, S. and Schaffner, S. F. and Kanyerezi, S. and Ahuka-Mundeke, S. and Rudder, S. and Pillay, S. and Nabadda, S. and Behillil, S. and Budiaki, S. L. and van der Werf, S. and Mashe, T. and Mohale, T. and Le-Viet, T. and Velavan, T. P. and Schindler, T. and Maponga, T. G. and Bedford, T. and Anyaneji, U. J. and Chinedu, U. and Ramphal, U. and George, U. E. and Enouf, V. and Nene, V. and Gorova, V. and Roshdy, W. H. and Karim, W. A. and Ampofo, W. K. and Preiser, W. and Choga, W. T. and Ahmed, Y. A. and Ramphal, Y. and Bediako, Y. and Naidoo, Y. and Butera, Y. and de Laurent, Z. R. and Ouma, A. E. O. and von Gottberg, A. and Githinji, G. and Moeti, M. and Tomori, O. and Sabeti, P. C. and Sall, A. A. and Oyola, S. O. and Tebeje, Y. K. and Tessema, S. K. and de Oliveira, T. and Happi, C. and Lessells, R. and Nkengasong, J. and Wilkinson, E.. (2022) The evolving SARS-CoV-2 epidemic in Africa: insights from rapidly expanding genomic surveillance. Science, 378 (6615). eabq5358.

Tumbo, Anneth-Mwasi Nasson. Heterogeneity in Plasmodium falciparum whole sporozoite vaccine induced humoral immune responses and protection in African volunteers: the role of age, human pegivirus and human immunodeficiency virus co-infections. 2022, Doctoral Thesis, University of Basel, Associated Institution, Faculty of Science.

Yoboue, C. A. and Hosch, S. and Donfack, O. T. and Guirou, E. A. and Nlavo, B. M. and Ayekaba, M. O. and Guerra, C. and Phiri, W. P. and Garcia, G. A. and Schindler, T. and Daubenberger, C. A.. (2022) Characterising co-infections with Plasmodium spp., Mansonella perstans or Loa loa in asymptomatic children, adults and elderly people living on Bioko Island using nucleic acids extracted from malaria rapid diagnostic tests. PLoS Negl Trop Dis, 16 (1). e0009798.

2021

Bechtold, P. and Wagner, P. and Hosch, S. and Siegrist, D. and Ruiz-Serrano, A. and Gregorini, M. and Mpina, M. and Ondó, F. A. and Obama, J. and Ayekaba, M. O. and Engler, O. and Stark, W. J. and Daubenberger, C. A. and Schindler, T.. (2021) Rapid identification of SARS-CoV-2 variants of concern using a portable peakPCR platform. Analytical chemistry, 93 (49). pp. 16350-16359.

Brunetti, Giulio and Padovani, Francesco and De Pastina, Annalisa and Rotella, Chiara and Monahan, Amy and Hoffman, Stephen L. and Jongo, Said A. and Abdulla, Salim and Corradin, Giampietro and Pluschke, Gerd and Daubenberger, Claudia and Hegner, Martin. (2021) Nanotechnological immunoassay for rapid label-free analysis of candidate malaria vaccines. Nanoscale, 13 (4). pp. 2338-2349.

Chen, Y. and Xu, K. and Piccoli, L. and Foglierini, M. and Tan, J. and Jin, W. and Gorman, J. and Tsybovsky, Y. and Zhang, B. and Traore, B. and Silacci-Fregni, C. and Daubenberger, C. and Crompton, P. D. and Geiger, R. and Sallusto, F. and Kwong, P. D. and Lanzavecchia, A.. (2021) Structural basis of malaria RIFIN binding by LILRB1-containing antibodies. Nature (592). pp. 639-643.

Cuénod, A. and Wüthrich, D. and Seth-Smith, H. M. B. and Ott, C. and Gehringer, C. and Foucault, F. and Mouchet, R. and Kassim, A. and Revathi, G. and Vogt, D. R. and von Felten, S. and Bassetti, S. and Tschudin-Sutter, S. and Hettich, T. and Schlotterbeck, G. and Homberger, C. and Casanova, C. and Moran-Gilad, J. and Sagi, O. and Rodriguez-Sanchez, B. and Muller, F. and Aerni, M. and Gaia, V. and van Dessel, H. and Kampinga, G. A. and Müller, C. and Daubenberger, C. and Pflüger, V. and Egli, A.. (2021) Whole-genome sequence-informed MALDI-TOF MS diagnostics reveal importance of Klebsiella oxytoca group in invasive infections: a retrospective clinical study. Genome Med, 13. p. 150.

Dudas, G. and Hong, S. L. and Potter, B. I. and Calvignac-Spencer, S. and Niatou-Singa, F. S. and Tombolomako, T. B. and Fuh-Neba, T. and Vickos, U. and Ulrich, M. and Leendertz, F. H. and Khan, K. and Huber, C. and Watts, A. and Olendraite, I. and Snijder, J. and Wijnant, K. N. and Bonvin, Amjj and Martres, P. and Behillil, S. and Ayouba, A. and Maidadi, M. F. and Djomsi, D. M. and Godwe, C. and Butel, C. and Simaitis, A. and Gabrielaite, M. and Katenaite, M. and Norvilas, R. and Raugaite, L. and Koyaweda, G. W. and Kandou, J. K. and Jonikas, R. and Nasvytiene, I. and Zemeckiene, Z. and Gečys, D. and Tamusauskaite, K. and Norkiene, M. and Vasiliunaite, E. and Timinskas, A. and Alzbutas, G. and Aziza, A. A. and Lusamaki, E. K. and Cigolo, J. M. and Mawete, F. M. and Lofiko, E. L. and Kingebeni, P. M. and Tamfum, J. M. and Belizaire, M. R. D. and Essomba, R. G. and Assoumou, M. C. O. and Mboringong, A. B. and Dieng, A. B. and Juozapaite, D. and Hosch, S. and Obama, J. and Ayekaba, M. O. and Naumovas, D. and Pautienius, A. and Rafaï, C. D. and Vitkauskienė, A. and Ugenskienė, R. and Gedvilaitė, A. and Čere�kevičius, D. and Lesauskaitė, V. and Gri�kevičius, L. and Baele, G.. (2021) Emergence and spread of SARS-CoV-2 lineage B.1.620 with variant of concern-like mutations and deletions. Nat Commun, 12. p. 5769.

Duffy, F. J. and Du, Y. and Carnes, J. and Epstein, J. E. and Hoffman, S. L. and Abdulla, S. and Jongo, S. and Mpina, M. and Daubenberger, C. and Aitchison, J. D. and Stuart, K.. (2021) Early whole blood transcriptional responses to radiation-attenuated; Plasmodium falciparum; sporozoite vaccination in malaria naive and malaria pre-exposed adult volunteers. Malar J, 20. p. 308.

Fink, G. and Orlova-Fink, N. and Schindler, T. and Grisi, S. and Ferrer, A. P. S. and Daubenberger, C. and Brentani, A.. (2021) Inactivated trivalent influenza vaccination is associated with lower mortality among patients with COVID-19 in Brazil. BMJ Evid Based Med, 26 (4). pp. 192-193.

Jongo, S. A. and Urbano, V. and Church, L. W. P. and Olotu, A. and Manock, S. R. and Schindler, T. and Mtoro, A. and Kc, N. and Hamad, A. and Nyakarungu, E. and Mpina, M. and Deal, A. and Bijeri, J. R. and Ondo Mangue, M. E. and Ntutumu Pasialo, B. E. and Nguema, G. N. and Owono, S. N. and Rivas, M. R. and Chemba, M. and Kassim, K. R. and James, E. R. and Stabler, T. and Abebe, Y. and Saverino, E. and Sax, J. and Hosch, S. and Tumbo, A. M. and Gondwe, L. and Segura, J. L. and Falla, C. C. and Phiri, W. P. and Hergott, D. E. B. and Garcia, G. A. and Schwabe, C. and Maas, C. D. and Murshedkar, T. and Billingsley, P. F. and Tanner, M. and Ayekaba, M. O. and Sim, B. K. L. and Daubenberger, C. and Richie, T. L. and Abdulla, S. and Hoffman, S. L.. (2021) Immunogenicity and protective efficacy of radiation-attenuated and chemo-attenuated PfSPZ vaccines in Equatoguinean adults. Am J Trop Med Hyg, 104 (1). pp. 283-293.

Nchama, Vunn and Said, A. H. and Mtoro, A. and Bidjimi, G. O. and Owono, M. A. and Maye, E. R. M. and Mangue, M. E. O. and Okomo, G. N. N. and Pasialo, B. E. N. and Ondo, D. M. and Lopez, M. A. and Mochomuemue, F. L. and Obono, M. O. and Besaha, J. C. M. and Chuquiyauri, R. and Jongo, S. A. and Kamaka, K. and Kibondo, U. A. and Athuman, T. and Falla, C. C. and Eyono, J. N. M. and Smith, J. M. and Garcia, G. A. and Raso, J. and Nyakarungu, E. and Mpina, M. and Schindler, T. and Daubenberger, C. and Lemiale, L. and Billingsley, P. F. and Sim, B. K. L. and Richie, T. L. and Church, L. W. P. and Olotu, A. and Tanner, M. and Hoffman, S. L. and Abdulla, S.. (2021) Incidence of Plasmodium falciparum malaria infection in 6-month to 45-year-olds on selected areas of Bioko Island, Equatorial Guinea. Malar J, 20. p. 322.

Oneko, M. and Steinhardt, L. C. and Yego, R. and Wiegand, R. E. and Swanson, P. A. and Kc, N. and Akach, D. and Sang, T. and Gutman, J. R. and Nzuu, E. L. and Dungani, A. and Kim Lee Sim, B. and Oloo, P. N. and Otieno, K. and Bii, D. K. and Billingsley, P. F. and James, E. R. and Kariuki, S. and Samuels, A. M. and Jongo, S. and Chebore, W. and Abdulla, S. and Daubenberger, C. and Mpina, M. and Styers, D. and Potter, G. E. and Abarbanell, G. and Richie, T. L. and Hoffman, S. L. and Seder, R. A.. (2021) Safety, immunogenicity and efficacy of PfSPZ vaccine against malaria in infants in western Kenya: a double-blind, randomized, placebo-controlled phase 2 trial. Nat Med, 27 (9). pp. 1636-1645.

Vanobberghen, F. and Lweno, O. and Kümmerle, A. and Mwebi, K. D. and Asilia, P. and Simon, B. and Mswata, S. and Schmidlin, S. and Glass, T. R. and Daubenberger, C. and Tanner, M. and Meyer-Monard, S.. (2021) Efficacy and safety of intravenous ferric carboxymaltose compared with oral iron for the treatment of iron deficiency anaemia in women after childbirth in Tanzania: a parallelgroup, open-label, randomised controlled phase 3 trial. Lancet Glob Health, 9 (2). e189-e198.

Warryn, L. and Dangy, J. P. and Gersbach, P. and Gehringer, M. and Altmann, K. H. and Pluschke, G.. (2021) An antigen capture assay for the detection of mycolactone, the polyketide toxin of Mycobacterium ulcerans. J Immunol, 206 (11). pp. 2753-2762.

Wilkinson, E. and Giovanetti, M. and Tegally, H. and San, J. E. and Lessells, R. and Cuadros, D. and Martin, D. P. and Rasmussen, D. A. and Zekri, A. N. and Sangare, A. K. and Ouedraogo, A. S. and Sesay, A. K. and Priscilla, A. and Kemi, A. S. and Olubusuyi, A. M. and Oluwapelumi, A. O. O. and Hammami, A. and Amuri, A. A. and Sayed, A. and Ouma, A. E. O. and Elargoubi, A. and Ajayi, N. A. and Victoria, A. F. and Kazeem, A. and George, A. and Trotter, A. J. and Yahaya, A. A. and Keita, A. K. and Diallo, A. and Kone, A. and Souissi, A. and Chtourou, A. and Gutierrez, A. V. and Page, A. J. and Vinze, A. and Iranzadeh, A. and Lambisia, A. and Ismail, A. and Rosemary, A. and Sylverken, A. and Femi, A. and Ibrahimi, A. and Marycelin, B. and Oderinde, B. S. and Bolajoko, B. and Dhaala, B. and Herring, B. L. and Njanpop-Lafourcade, B. M. and Kleinhans, B. and McInnis, B. and Tegomoh, B. and Brook, C. and Pratt, C. B. and Scheepers, C. and Akoua-Koffi, C. G. and Agoti, C. N. and Peyrefitte, C. and Daubenberger, C. and Morang'a, C. M. and Nokes, D. J. and Amoako, D. G. and Bugembe, D. L. and Park, D. and Baker, D. and Doolabh, D. and Ssemwanga, D. and Tshiabuila, D. and Bassirou, D. and Amuzu, D. S. Y. and Goedhals, D. and Omuoyo, D. O. and Maruapula, D. and Foster-Nyarko, E. and Lusamaki, E. K. and Simulundu, E. and Ong'era, E. M. and Ngabana, E. N. and Shumba, E. and El Fahime, E. and Lokilo, E. and Mukantwari, E. and Philomena, E. and Belarbi, E. and Simon-Loriere, E. and Anoh, E. A. and Leendertz, F. and Ajili, F. and Enoch, F. O. and Wasfi, F. and Abdelmoula, F. and Mosha, F. S. and Takawira, F. T. and Derrar, F. and Bouzid, F. and Onikepe, F. and Adeola, F. and Muyembe, F. M. and Tanser, F. and Dratibi, F. A. and Mbunsu, G. K. and Thilliez, G. and Kay, G. L. and Githinji, G. and van Zyl, G. and Awandare, G. A. and Schubert, G. and Maphalala, G. P. and Ranaivoson, H. C. and Lemriss, H. and Anise, H. and Abe, H. and Karray, H. H. and Nansumba, H. and Elgahzaly, H. A. and Gumbo, H. and Smeti, I. and Ayed, I. B. and Odia, I. and Ben Boubaker, I. B. and Gaaloul, I. and Gazy, I. and Mudau, I. and Ssewanyana, I. and Konstantinus, I. and Lekana-Douk, J. B. and Makangara, J. C. and Tamfum, J. M. and Heraud, J. M. and Shaffer, J. G. and Giandhari, J. and Li, J. and Yasuda, J. and Mends, J. Q. and Kiconco, J. and Morobe, J. M. and Gyapong, J. O. and Okolie, J. C. and Kayiwa, J. T. and Edwards, J. A. and Gyamfi, J. and Farah, J. and Nakaseegu, J. and Ngoi, J. M. and Namulondo, J. and Andeko, J. C. and Lutwama, J. J. and O'Grady, J. and Siddle, K. and Adeyemi, K. T. and Tumedi, K. A. and Said, K. M. and Hae-Young, K. and Duedu, K. O. and Belyamani, L. and Fki-Berrajah, L. and Singh, L. and Martins, L. O. and Tyers, L. and Ramuth, M. and Mastouri, M. and Aouni, M. and El Hefnawi, M. and Matsheka, M. I. and Kebabonye, M. and Diop, M. and Turki, M. and Paye, M. and Nyaga, M. M. and Mareka, M. and Damaris, M. M. and Mburu, M. W. and Mpina, M. and Nwando, M. and Owusu, M. and Wiley, M. R. and Youtchou, M. T. and Ayekaba, M. O. and Abouelhoda, M. and Seadawy, M. G. and Khalifa, M. K. and Sekhele, M. and Ouadghiri, M. and Diagne, M. M. and Mwenda, M. and Allam, M. and Phan, M. V. T. and Abid, N. and Touil, N. and Rujeni, N. and Kharrat, N. and Ismael, N. and Dia, N. and Mabunda, N. and Hsiao, N. Y. and Silochi, N. B. and Nsenga, N. and Gumede, N. and Mulder, N. and Ndodo, N. and Razanajatovo, N. H. and Iguosadolo, N. and Judith, O. and Kingsley, O. C. and Sylvanus, O. and Peter, O. and Femi, O. and Idowu, O. and Testimony, O. and Chukwuma, O. E. and Ogah, O. E. and Onwuamah, C. K. and Cyril, O. and Faye, O. and Tomori, O. and Ondoa, P. and Combe, P. and Semanda, P. and Oluniyi, P. E. and Arnaldo, P. and Quashie, P. K. and Dussart, P. and Bester, P. A. and Mbala, P. K. and Ayivor-Djanie, R. and Njouom, R. and Phillips, R. O. and Gorman, R. and Kingsley, R. A. and Carr, R. A. A. and El Kabbaj, S. and Gargouri, S. and Masmoudi, S. and Sankhe, S. and Lawal, S. B. and Kassim, S. and Trabelsi, S. and Metha, S. and Kammoun, S. and Lemriss, S. and Agwa, S. H. A. and Calvignac-Spencer, S. and Schaffner, S. F. and Doumbia, S. and Mandanda, S. M. and Aryeetey, S. and Ahmed, S. S. and Elhamoumi, S. and Andriamandimby, S. and Tope, S. and Lekana-Douki, S. and Prosolek, S. and Ouangraoua, S. and Mundeke, S. A. and Rudder, S. and Panji, S. and Pillay, S. and Engelbrecht, S. and Nabadda, S. and Behillil, S. and Budiaki, S. L. and van der Werf, S. and Mashe, T. and Aanniz, T. and Mohale, T. and Le-Viet, T. and Schindler, T. and Anyaneji, U. J. and Chinedu, U. and Ramphal, U. and Jessica, U. and George, U. and Fonseca, V. and Enouf, V. and Gorova, V. and Roshdy, W. H. and Ampofo, W. K. and Preiser, W. and Choga, W. T. and Bediako, Y. and Naidoo, Y. and Butera, Y. and de Laurent, Z. R. and Sall, A. A. and Rebai, A. and von Gottberg, A. and Kouriba, B. and Williamson, C. and Bridges, D. J. and Chikwe, I. and Bhiman, J. N. and Mine, M. and Cotten, M. and Moyo, S. and Gaseitsiwe, S. and Saasa, N. and Sabeti, P. C. and Kaleebu, P. and Tebeje, Y. K. and Tessema, S. K. and Happi, C. and Nkengasong, J. and de Oliveira, T.. (2021) A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa. Science, 374 (6566). pp. 423-431.

2020

Billingsley, Peter F. and Maas, Carl D. and Olotu, Ally and Schwabe, Christopher and García, Guillermo A. and Rivas, Matilde Riloha and Hergott, Dianna E. B. and Daubenberger, Claudia and Saverino, Elizabeth and Chaouch, Adel and Embon, Oscar and Chemba, Mwajuma and Nyakarungu, Elizabeth and Hamad, Ali and Cortes, Carlos and Schindler, Tobias and Mpina, Maximillian and Mtoro, Ali and Sim, B. Kim Lee and Richie, Thomas L. and McGhee, Ken and Tanner, Marcel and Obiang Lima, Gabriel Mbaga and Abdulla, Salim and Hoffman, Stephen L. and Ayekaba, Mitoha Ondo'o. (2020) The Equatoguinean Malaria Vaccine Initiative: from the launching of a clinical research platform to malaria elimination planning in Central West Africa. American Journal of Tropical Medicine and Hygiene, 103 (3). pp. 947-954.

Camponovo, Flavia and Campo, Joseph J. and Le, Timothy Q. and Oberai, Amit and Hung, Christopher and Pablo, Jozelyn V. and Teng, Andy A. and Liang, Xiaowu and Sim, B. Kim Lee and Jongo, Said and Abdulla, Salim and Tanner, Marcel and Hoffman, Stephen L. and Daubenberger, Claudia and Penny, Melissa A.. (2020) Proteome-wide analysis of a malaria vaccine study reveals personalized humoral immune profiles in Tanzanian adults. eLife, 9. e53080.

Daubenberger, C. A.. (2020) Towards protective immune responses against malaria in pregnant women. The Lancet infectious diseases, 20 (5). pp. 517-519.

Geiger, K. M. and Guignard, D. and Yang, C. and Bikorimana , J.-P. and Correia, B. E. and Houard, S. and Mkindi, C. and Daubenberger, C. and Spertini, F. and Corradin, G.. (2020) Epitope mapping and fine specificity of human T and B cell responses for novel candidate blood-stage malaria vaccine P27A. Frontiers in Immunology, 11. p. 412.

Guirou, Etienne and Schindler, Tobias and Hosch, Salome and Donfack, Olivier Tresor and Yoboue, Charlene Aya and Kraehenbuehl, Silvan and Deal, Anna and Cosi, Glenda and Gondwe, Linda and Mwangoka, Grace and Masuki, Heavenlight and Salim, Nahya and Mpina, Maxmillian and Said, Jongo and Abdulla, Salim and Hoffman, Stephen and Nlavo, Bonifacio Manguire and Maas, Carl and Falla, Carlos Cortes and Phiri, Wonder and Garcia, Guillermo and Tanner, Marcel and Daubenberger, Claudia. (2020) Molecular malaria surveillance using a novel protocol for extraction and analysis of nucleic acids retained on used rapid diagnostic tests. Scientific Reports. London.

Guirou, Etienne dit Anagalou. High-throughput molecular tests for routine surveillance of malaria potentially missed by rapid diagnostic tests. 2020, Doctoral Thesis, University of Basel, Faculty of Science.

Hill, Danika L. and Carr, Edward J. and Rutishauser, Tobias and Moncunill, Gemma and Campo, Joseph J. and Innocentin, Silvia and Mpina, Maxmillian and Nhabomba, Augusto and Tumbo, Anneth and Jairoce, Chenjerai and Moll, Henriëtte A. and van Zelm, Menno C. and Dobaño, Carlota and Daubenberger, Claudia and Linterman, Michelle A.. (2020) Immune system development varies according to age, location, and anemia in African children. Science Translational Medicine, 12 (529). eaaw9522.

Jongo, S. A. and Church, L. W. P. and Mtoro, A. T. and Chakravarty, S. and Ruben, A. J. and Swanson Ii, P. A. and Kassim, K. R. and Mpina, M. and Tumbo, A. M. and Milando, F. A. and Qassim, M. and Juma, O. A. and Bakari, B. M. and Simon, B. and James, E. R. and Abebe, Y. and Kc, N. and Saverino, E. and Fink, M. and Cosi, G. and Gondwe, L. and Studer, F. and Styers, D. and Seder, R. A. and Schindler, T. and Billingsley, P. F. and Daubenberger, C. and Sim, B. K. L. and Tanner, M. and Richie, T. L. and Abdulla, S. and Hoffman, S. L.. (2020) Increase of dose associated with decrease in protection against controlled human malaria infection by PfSPZ vaccine in Tanzanian adults. Clinical infectious diseases, 71 (11). pp. 2849-2857.

Keller, Dominique and Rothen, Julian and Dangy, Jean-Pierre and Saner, Corina and Daubenberger, Claudia and Allan, Fiona and Ame, Shaali M. and Ali, Said M. and Kabole, Fatma and Hattendorf, Jan and Rollinson, David and Seyfarth, Ralf and Knopp, Stefanie. (2020) Performance of a real-time PCR approach for diagnosing Schistosoma haematobium infections of different intensity in urine samples from Zanzibar. Infectious diseases of poverty, 9. p. 128.

Keller, L. and Patel, C. and Welsche, S. and Schindler, T. and Hürlimann, E. and Keiser, J.. (2020) Performance of the Kato-Katz method and real time polymerase chain reaction for the diagnosis of soil-transmitted helminthiasis in the framework of a randomised controlled trial: treatment efficacy and day-to-day variation. Parasit Vectors, 13. p. 517.

Krähenbühl, Silvan and Studer, Fabian and Guirou, Etienne and Deal, Anna and Mächler, Philipp and Hosch, Salome and Mpina, Maximilian and Mswata, Sarah and Daubenberger, Claudia and Schindler, Tobias. (2020) ELIMU-MDx: a web-based, open-source platform for storage, management and analysis of diagnostic qPCR data. Biotechniques, 68 (1). pp. 22-27.

Moncunill, Gemma and Scholzen, Anja and Mpina, Maximillian and Nhabomba, Augusto and Hounkpatin, Aurore Bouyoukou and Osaba, Lourdes and Valls, Raquel and Campo, Joseph J. and Sanz, Hèctor and Jairoce, Chenjerai and Williams, Nana Aba and Pasini, Erica M. and Arteta, David and Maynou, Joan and Palacios, Lourdes and Duran-Frigola, Miquel and Aponte, John J. and Kocken, Clemens H. M. and Agnandji, Selidji Todagbe and Mas, José Manuel and Mordmüller, Benjamin and Daubenberger, Claudia and Sauerwein, Robert and Dobaño, Carlota. (2020) Antigen-stimulated PBMC transcriptional protective signatures for malaria immunization. Science Translational Medicine, 12 (543). eaay8924.

Palmateer, N. C. and Tretina, K. and Orvis, J. and Ifeonu, O. O. and Crabtree, J. and Drabek, E. and Pelle, R. and Awino, E. and Gotia, H. T. and Munro, J. B. and Tallon, L. and Morrison, W. I. and Daubenberger, C. A. and Nene, V. and Knowles, D. P. and Bishop, R. P. and Silva, J. C.. (2020) Capture-based enrichment of Theileria parva DNA enables full genome assembly of first buffalo-derived strain and reveals exceptional intra-specific genetic diversity. PLoS Negl Trop Dis, 14 (10). e0008781.

Rothen, Julian and Sapugahawatte, Dulmini Nanayakkara and Li, Carmen and Lo, Norman and Vogel, Guido and Foucault, Frédéric and Pflüger, Valentin and Pothier, Joёl F. and Blom, Jochen and Daubenberger, Claudia and Ip, Margaret. (2020) A simple, rapid typing method for Streptococcus agalactiae based on ribosomal subunit proteins by MALDI-TOF MS. Scientific reports, 10. p. 8788.

Rutishauser, T. and Lepore, M. and Di Blasi , D. and Dangy, J. P. and Abdulla, S. and Jongo, S. and Ramadhani, K. and Sim, B. K. L. and Hoffman, S. L. and Tanner, M. and Daubenberger, C. and De Libero , G.. (2020) Activation of TCR Vδ1+ and Vδ1-Vδ2- γδ T cells upon controlled infection with Plasmodium falciparum in Tanzanian volunteers. Journal of Immunology, 204 (1). pp. 180-191.

Schmaler, Mathias and Orlova-Fink, Nina and Rutishauser, Tobias and Abdulla, Salim and Daubenberger, Claudia. (2020) Human unconventional T cells in Plasmodium falciparum infection. Seminars in immunopathology, 42 (3). pp. 265-277.

Tretina, K. and Haidar, M. and Madsen-Bouterse, S. A. and Sakura, T. and Mfarrej, S. and Fry, L. and Chaussepied, M. and Pain, A. and Knowles, D. P. and Nene, V. M. and Ginsberger, D. and Daubenberger, C. and Bishop, R. P. and Langsley, G. and Silva , J.C.. (2020) Theileria parasites subvert E2F signaling to stimulate leukocyte proliferation. Scientific reports, 10. p. 3982.

Tretina, Kyle and Pelle, Roger and Orvis, Joshua and Gotia, Hanzel T. and Ifeonu, Olukemi O. and Kumari, Priti and Palmateer, Nicholas C. and Iqbal, Shaikh B. A. and Fry, Lindsay M. and Nene, Vishvanath M. and Daubenberger, Claudia A. and Bishop, Richard P. and Silva, Joana C.. (2020) Re-annotation of the Theileria parva genome refines 53% of the proteome and uncovers essential components of N-glycosylation, a conserved pathway in many organisms. BMC genomics, 21. p. 279.

2019

Amelio, Patrizia and Portevin, Damien and Hella, Jerry and Reither, Klaus and Kamwela, Lujeko and Lweno, Omar and Tumbo, Anneth and Geoffrey, Linda and Ohmiti, Khalid and Ding, Song and Pantaleo, Giuseppe and Daubenberger, Claudia and Perreau, Matthieu. (2019) HIV infection functionally impairs Mycobacterium tuberculosis-specific CD4 and CD8 T-cell responses. Journal of virology, 93 (5). e01728-18.

Hill, Danika L. and Pierson, Wim and Bolland, Daniel J. and Mkindi, Catherine and Carr, Edward J. and Wang, Jiong and Houard, Sophie and Wingett, Steven W. and Audran, Regine and Wallin, Elizabeth F. and Jongo, Said A. and Kamaka, Kassim and Zand, Martin and Spertini, Francois and Daubenberger, Claudia and Corcoran, Anne E. and Linterman, Michelle A.. (2019) The adjuvant GLA-SE promotes human Tfh cell expansion and emergence of public TCRβ clonotypes. Journal of experimental medicine, 216 (8). pp. 1857-1873.

Jongo, Said A. and Church, L. W. Preston and Mtoro, Ali T. and Chakravarty, Sumana and Ruben, Adam J. and Swanson, Phillip A. and Kassim, Kamaka R. and Mpina, Maximillian and Tumbo, Anneth-Mwasi and Milando, Florence A. and Qassim, Munira and Juma, Omar A. and Bakari, Bakari M. and Simon, Beatus and James, Eric R. and Abebe, Yonas and Kc, Natasha and Saverino, Elizabeth and Gondwe, Linda and Studer, Fabian and Fink, Martina and Cosi, Glenda and El-Khorazaty, Jill and Styers, David and Seder, Robert A. and Schindler, Tobias and Billingsley, Peter F. and Daubenberger, Claudia and Sim, B. Kim Lee and Tanner, Marcel and Richie, Thomas L. and Abdulla, Salim and Hoffman, Stephen L.. (2019) Safety and differential antibody and T-cell responses to Plasmodium falciparum sporozoite vaccine by age in Tanzanian adults, adolescents, children, and infants. American journal of tropical medicine and hygiene, 100 (6). pp. 1433-1444.

Mkindi, Catherine Gerald. Understanding drivers of experimental malaria sub-unit vaccine induced immunity in Tanzania volunteers. 2019, Doctoral Thesis, University of Basel, Faculty of Science.

Mkindi, Catherine Gerald and Marandu, Elias Antony and Masawa, Ngisi and Bani, Farida and Nyuri, Amina and Byakuzana, Theonestina and Klimkait, Thomas and Ding, Song and Pantaleo, Giuseppe and Battegay, Manuel and Orlova-Fink, Nina and Weisser-Rohacek, Maja and Daubenberger, Claudia. (2019) Safety and tolerance of lymph node biopsies from chronic HIV-1 volunteers in rural Tanzania. BMC Research Notes, 12. p. 561.

Rothen, J. and Pothier, J. F. and Foucault, F. and Blom, J. and Nanayakkara, D. and Li, C. and Ip, M. and Tanner, M. and Vogel, G. and Pflüger, V. and Daubenberger, C.. (2019) Subspecies typing of Streptococcus agalactiae based on ribosomal subunit protein mass variation by MADLI-TOF MS. Frontiers in Microbiology, 10. p. 471.

Schindler, T. Robaina and T. Sax, J. Raso and Bieri, J. Mpina and M. Gondwe, L. Acuche and L. Garcia, G. Cortes and C. Maas, C. Daubenberger. (2019) Molecular monitoring of the diversity of human pathogenic malaria species in blood donations on Bioko Island, Equatorial Guinea. Malaria journal, 18. p. 9.

Schindler, Tobias. Developing, testing and implementing novel molecular diagnostic tests and procedures for malaria at the individual and population level in East and West Africa. 2019, Doctoral Thesis, University of Basel, Faculty of Science.

Schindler, Tobias and Deal, Anna C. and Fink, Martina and Guirou, Etienne and Moser, Kara A. and Mwakasungula, Solomon M. and Mihayo, Michael G. and Jongo, Said A. and Chaki, Prosper P. and Abdulla, Salim and Valverde, Paulo C. Manrique and Torres, Katherine and Bijeri, Jose R. and Silva, Joana C. and Hoffman, Stephen L. and Gamboa, Dionicia and Tanner, Marcel and Daubenberger, Claudia. (2019) A multiplex qPCR approach for detection of pfhrp2 and pfhrp3 gene deletions in multiple strain infections of Plasmodium falciparum. Scientific reports, 9. p. 13107.

Schindler, Tobias and Jongo, Said and Studer, Fabian and Mpina, Maximilian and Mwangoka, Grace and Mswata, Sarah and Ramadhani, Kamaka and Sax, Julian and Church, L. W. Preston and Richie, Thomas L. and Tanner, Marcel and Hoffman, Stephen L. and Abdulla, Salim and Daubenberger, Claudia. (2019) Two cases of long-lasting, sub-microscopic Plasmodium malariae infections in adults from coastal Tanzania. Malaria journal, 18. p. 149.

2018

Boillat-Blanco, Noémie and Tumbo, Anneth-Mwasi N. and Perreau, Matthieu and Amelio, Patrizia and Ramaiya, Kaushik L. and Mganga, Maliwaza and Schindler, Christian and Gagneux, Sebastien and Reither, Klaus and Probst-Hensch, Nicole and Pantaleo, Giuseppe and Daubenberger, Claudia and Portevin, Damien. (2018) Hyperglycaemia is inversely correlated with live M. bovis BCG-specific CD4; +; T cell responses in Tanzanian adults with latent or active tuberculosis. Immunity, inflammation and disease, 6 (2). pp. 345-353.

Jongo, Said A. and Shekalaghe, Seif A. and Church, L. W. Preston and Ruben, Adam J. and Schindler, Tobias and Zenklusen, Isabelle and Rutishauser, Tobias and Rothen, Julian and Tumbo, Anneth and Mkindi, Catherine and Mpina, Maximillian and Mtoro, Ali T. and Ishizuka, Andrew S. and Kassim, Kamaka Ramadhani and Milando, Florence A. and Qassim, Munira and Juma, Omar A. and Mwakasungula, Solomon and Simon, Beatus and James, Eric R. and Abebe, Yonas and Kc, Natasha and Chakravarty, Sumana and Saverino, Elizabeth and Bakari, Bakari M. and Billingsley, Peter F. and Seder, Robert A. and Daubenberger, Claudia and Sim, B. Kim Lee and Richie, Thomas L. and Tanner, Marcel and Abdulla, Salim and Hoffman, Stephen L.. (2018) Safety, immunogenicity, and protective efficacy against controlled human malaria infection of Plasmodium falciparum sporozoites vaccine in Tanzanian adults. American journal of tropical medicine and hygiene, 99 (2). pp. 338-349.

Morach, Marina and Stephan, Roger and Schmitt, Sarah and Ewers, Christa and Zschöck, Michael and Reyes-Velez, Julian and Gilli, Urs and Del Pilar Crespo-Ortiz, María and Crumlish, Margaret and Gunturu, Revathi and Daubenberger, Claudia A. and Ip, Margaret and Regli, Walter and Johler, Sophia. (2018) Population structure and virulence gene profiles of Streptococcus agalactiae collected from different hosts worldwide. European Journal of Clinical Microbiology & Infectious Diseases, 37 (3). pp. 527-536.

Olotu, Ally and Urbano, Vicente and Hamad, Ali and Eka, Martin and Chemba, Mwajuma and Nyakarungu, Elizabeth and Raso, Jose and Eburi, Esther and Mandumbi, Dolores O. and Hergott, Dianna and Maas, Carl D. and Ayekaba, Mitoha O. and Milang, Diosdado N. and Rivas, Matilde R. and Schindler, Tobias and Embon, Oscar M. and Ruben, Adam J. and Saverino, Elizabeth and Abebe, Yonas and Kc, Natasha and James, Eric R. and Murshedkar, Tooba and Manoj, Anita and Chakravarty, Sumana and Li, Minglin and Adams, Matthew and Schwabe, Christopher and Segura, J. Luis and Daubenberger, Claudia and Tanner, Marcel and Richie, Thomas L. and Billingsley, Peter F. and Lee Sim, B. Kim and Abdulla, Salim and Hoffman, Stephen L.. (2018) Advancing global health through development and clinical trials partnerships: a randomized, placebo-controlled, double-blind assessment of safety, tolerability, and Immunogenicity of Plasmodium falciparum sporozoites vaccine for malaria in healthy Equatoguinean men. American Journal of Tropical Medicine and Hygiene, 98 (1). pp. 308-318.

Rothen, Julian and Murie, Carl and Carnes, Jason and Anupama, Atashi and Abdulla, Salim and Chemba, Mwajuma and Mpina, Maxmillian and Tanner, Marcel and Lee Sim, B. Kim and Hoffman, Stephen L. and Gottardo, Raphael and Daubenberger, Claudia and Stuart, Ken. (2018) Whole blood transcriptome changes following controlled human malaria infection in malaria pre-exposed volunteers correlate with parasite prepatent period. PLoS ONE, 13 (6). e0199392.

Schneeberger, Pierre H. H. and Coulibaly, Jean T. and Panic, Gordana and Daubenberger, Claudia and Gueuning, Morgan and Frey, Jürg E. and Keiser, Jennifer. (2018) Investigations on the interplays between Schistosoma mansoni, praziquantel and the gut microbiome. Parasites and Vectors, 11. p. 168.

Tan, Joshua and Sack, Brandon K. and Oyen, David and Zenklusen, Isabelle and Piccoli, Luca and Barbieri, Sonia and Foglierini, Mathilde and Fregni, Chiara Silacci and Marcandalli, Jessica and Jongo, Said and Abdulla, Salim and Perez, Laurent and Corradin, Giampietro and Varani, Luca and Sallusto, Federica and Sim, Betty Kim Lee and Hoffman, Stephen L. and Kappe, Stefan H. I. and Daubenberger, Claudia and Wilson, Ian A. and Lanzavecchia, Antonio. (2018) A public antibody lineage that potently inhibits malaria infection through dual binding to the circumsporozoite protein. Nature medicine, 24 (4). pp. 401-407.

Ubillos, Itziar and Ayestaran, Aintzane and Nhabomba, Augusto J. and Dosoo, David and Vidal, Marta and Jiménez, Alfons and Jairoce, Chenjerai and Sanz, Hèctor and Aguilar, Ruth and Williams, Nana Aba and Díez-Padrisa, Núria and Mpina, Maximilian and Sorgho, Hermann and Agnandji, Selidji Todagbe and Kariuki, Simon and Mordmüller, Benjamin and Daubenberger, Claudia and Asante, Kwaku Poku and Owusu-Agyei, Seth and Sacarlal, Jahit and Aide, Pedro and Aponte, John J. and Dutta, Sheetij and Gyan, Ben and Campo, Joseph J. and Valim, Clarissa and Moncunill, Gemma and Dobaño, Carlota. (2018) Baseline exposure, antibody subclass, and hepatitis B response differentially affect malaria protective immunity following RTS,S/AS01E vaccination in African children. BMC medicine, 16. p. 197.

Vogel, Guido and Cuénod, Aline and Mouchet, Roxanne and Strauss, André and Daubenberger, Claudia and Pflueger, Valentin and Portevin, Damien. (2018) Functional characterization and phenotypic monitoring of human hematopoietic stem cell expansion and differentiation of monocytes and macrophages by whole-cell mass spectrometry. Stem Cell Research, 26. pp. 47-54.

Zenklusen, Isabelle and Jongo, Said and Abdulla, Salim and Ramadhani, Kamaka and Lee Sim, B. Kim and Cardamone, Hayley and Flannery, Erika L. and Nguyen, Thao and Fishbaugher, Matthew and Steel, Ryan W. J. and Betz, Will and Carmago, Nelly and Mikolajczak, Sebastian and Kappe, Stefan H. I. and Hoffman, Stephen L. and Sack, Brandon K. and Daubenberger, Claudia. (2018) Immunization of malaria pre-exposed volunteers with PfSPZ Vaccine elicits long-lived IgM invasion-inhibitory and complement-fixing antibodies. Journal of infectious diseases, 217 (10). pp. 1569-1578.

2017

Amelio, Patrizia and Portevin, Damien and Reither, Klaus and Mhimbira, Francis and Mpina, Maxmillian and Tumbo, Anneth and Nickel, Beatrice and Marti, Hanspeter and Knopp, Stefanie and Ding, Song and Penn-Nicholson, Adam and Darboe, Fatoumatta and Ohmiti, Khalid and Scriba, Thomas J. and Pantaleo, Giuseppe and Daubenberger, Claudia and Perreau, Matthieu. (2017) Mixed Th1 and Th2 Mycobacterium tuberculosis-specific CD4 T cell responses in patients with active pulmonary tuberculosis from Tanzania. PLoS neglected tropical diseases, 11 (7). e0005817.

Cornick, Jennifer E. and Tastan Bishop, Özlem and Yalcin, Feyruz and Kiran, Anmol M. and Kumwenda, Benjamin and Chaguza, Chrispin and Govindpershad, Shanil and Ousmane, Sani and Senghore, Madikay and du Plessis, Mignon and Pluschke, Gerd and Ebruke, Chinelo and McGee, Lesley and Sigaùque, Beutel and Collard, Jean-Marc and Bentley, Stephen D. and Kadioglu, Aras and Antonio, Martin and von Gottberg, Anne and French, Neil and Klugman, Keith P. and Heyderman, Robert S. and Alderson, Mark and Everett, Dean B. and PAGe consortium, . (2017) The global distribution and diversity of protein vaccine candidate antigens in the highly virulent Streptococcus pnuemoniae serotype 1. Vaccine, 35 (6). pp. 972-980.

Kassim, Ali and Pflüger, Valentin and Premji, Zul and Daubenberger, Claudia and Revathi, Gunturu. (2017) Comparison of biomarker based Matrix Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS) and conventional methods in the identification of clinically relevant bacteria and yeast. BMC microbiology, 17. p. 128.

Moncunill, G. and Mpina, M. and Nhabomba, A. J. and Aguilar, R. and Ayestaran, A. and Sanz, H. and Campo, J. J. and Jairoce, C. and Barrios, D. and Dong, Y. and Diez-Padrisa, N. and Fernandes, J. F. and Sacarlal, J. and Williams, N. A. and Harezlak, J. and Mordmuller, B. and Agnandji, S. T. and Aponte, J. J. and Daubenberger, C. and Valim, C. and Dobano, C.. (2017) Distinct helper T cell type 1 and 2 responses associated with malaria protection and risk in RTS,S/AS01E vaccinees. Clinical Infectious Diseases, 65 (5). pp. 746-755.

Moncunill, Gemma and De Rosa, Stephen C. and Ayestaran, Aintzane and Nhabomba, Augusto J. and Mpina, Maximillian and Cohen, Kristen W. and Jairoce, Chenjerai and Rutishauser, Tobias and Campo, Joseph J. and Harezlak, Jaroslaw and Sanz, Héctor and Díez-Padrisa, Núria and Williams, Nana Aba and Morris, Daryl and Aponte, John J. and Valim, Clarissa and Daubenberger, Claudia and Dobaño, Carlota and McElrath, M. Juliana. (2017) RTS,S/AS01E malaria vaccine induces memory and polyfunctional T cell responses in a pediatric african phase III trial. Frontiers in Immunology, 8. p. 1008.

Pieper, Kathrin and Tan, Joshua and Piccoli, Luca and Foglierini, Mathilde and Barbieri, Sonia and Chen, Yiwei and Silacci-Fregni, Chiara and Wolf, Tobias and Jarrossay, David and Anderle, Marica and Abdi, Abdirahman and Ndungu, Francis M. and Doumbo, Ogobara K. and Traore, Boubacar and Tran, Tuan M. and Jongo, Said and Zenklusen, Isabelle and Crompton, Peter D. and Daubenberger, Claudia and Bull, Peter C. and Sallusto, Federica and Lanzavecchia, Antonio. (2017) Public antibodies to malaria antigens generated by two LAIR1 insertion modalities. Nature, 548 (7669). pp. 597-601.

Sanz, Hector and Aponte, John J. and Harezlak, Jaroslaw and Dong, Yan and Ayestaran, Aintzane and Nhabomba, Augusto and Mpina, Maxmillian and Maurin, Obiang Régis and Díez-Padrisa, Núria and Aguilar, Ruth and Moncunill, Gemma and Selidji Todagbe, Agnandij and Daubenberger, Claudia and Dobaño, Carlota and Valim, Clarissa. (2017) drLumi: an open-source package to manage data, calibrate, and conduct quality control of multiplex bead-based immunoassays data analysis. PLoS ONE, 12 (11). e0187901.

2016

Boillat-Blanco, Noémie and Ramaiya, Kaushik L. and Mganga, Maliwasa and Minja, Lilian T. and Bovet, Pascal and Schindler, Christian and Von Eckardstein, Arnold and Gagneux, Sebastien and Daubenberger, Claudia and Reither, Klaus and Probst-Hensch, Nicole. (2016) Transient hyperglycemia in patients with tuberculosis in Tanzania : implications for diabetes screening algorithms. Journal of Infectious Diseases, 213 (7). pp. 1163-1172.

Gotia, Hanzel T. and Munro, James B. and Knowles, Donald P. and Daubenberger, Claudia A. and Bishop, Richard P. and Silva, Joana C.. (2016) Absolute quantification of the host-to-parasite DNA ratio in Theileria parva-infected lymphocyte cell lines. PLoS ONE, 11 (3). e0150401.

Olds, Cassandra L. and Mwaura, Stephen and Odongo, David O. and Scoles, Glen A. and Bishop, Richard and Daubenberger, Claudia. (2016) Induction of humoral immune response to multiple recombinant Rhipicephalus appendiculatus antigens and their effect on tick feeding success and pathogen transmission. Parasites and Vectors, 9 (1). p. 484.

Rothen, J. and Githaka, N. and KAnduma, E. G. and Olds, C. and Pflüger, V. and Mwaura, S. and Bishop, R. P. and Daubenberger, C.. (2016) Matrix-assisted laser desorption/ionization time of flight mass spectrometry for comprehensive indexing of East African ixodid tick species. Parasites and Vectors, 9. p. 151.

2015

Boillat Blanco, Noémie. Comorbidity between counnunicable and non-communicable diseases : the example of the dual burden of tuberculosis and diabetes in Dar es Salaam, Tanzania. 2015, Doctoral Thesis, University of Basel, Faculty of Science.

Heckel, Tobias and Schmucki, Roland and Berrera, Marco and Ringshandl, Stephan and Badi, Laura and Steiner, Guido and Ravon, Morgane and Küng, Erich and Kuhn, Bernd and Kratochwil, Nicole A. and Schmitt, Georg and Kiialainen, Anna and Nowaczyk, Corinne and Daff, Hamina and Khan, Azinwi Phina and Lekolool, Isaac and Pelle, Roger and Okoth, Edward and Bishop, Richard and Daubenberger, Claudia and Ebeling, Martin and Certa, Ulrich. (2015) Functional analysis and transcriptional output of the Göttingen minipig genome. BMC genomics, 16. p. 932.

Lenz, Nicole and Schindler, Tobias and Kagina, Benjamin M. and Zhang, Jitao David and Lukindo, Tedson and Mpina, Maxmillian and Bang, Peter and Kromann, Ingrid and Hoff, Søren T. and Andersen, Peter and Reither, Klaus and Churchyard, Gavin J. and Certa, Ulrich and Daubenberger, Claudia A.. (2015) Antiviral innate immune activation in HIV-infected adults negatively affects H1/IC31-induced vaccine-specific memory CD4+ T cells. Clinical and vaccine immunology, Vol. 22, H. 7. pp. 688-696.

Norling, Martin and Bishop, Richard P. and Pelle, Roger and Qi, Weihong and Henson, Sonal and Drábek, Elliott F. and Tretina, Kyle and Odongo, David and Mwaura, Stephen and Njoroge, Thomas and Bongcam-Rudloff, Erik and Daubenberger, Claudia A. and Silva, Joana C.. (2015) The genomes of three stocks comprising the most widely utilized live sporozoite Theileria parva vaccine exhibit very different degrees and patterns of sequence divergence. BMC genomics, Vol. 16 , 729.

Obiero, Joshua M. and Shekalaghe, Seif and Hermsen, Cornelus C. and Mpina, Maxmillian and Bijker, Else M. and Roestenberg, Meta and Teelen, Karina and Billingsley, Peter F. and Sim, B. Kim Lee and James, Eric R. and Daubenberger, Claudia A. and Hoffman, Stephen L. and Abdulla, Salim and Sauerwein, Robert W. and Scholzen, Anja. (2015) Impact of malaria preexposure on antiparasite cellular and humoral immune responses after controlled human malaria infection. Infection and immunity, Vol. 83, H. 5. pp. 2185-2196.

Portevin, Damien and Moukambi, Félicien and Mpina, Maxmillian and Bauer, Asli and Haraka, Frederick and Chachage, Mkunde and Metzger, Philipp and Saathoff, Elmar and Clowes, Petra and Ntinginya, Nyanda E. and Rachow, Andrea and Hoelscher, Michael and Reither, Klaus and Daubenberger, Claudia A. and Geldmacher, Christof. (2015) Maturation and mip-1β production of cytomegalovirus-specific T cell responses in Tanzanian children, adolescents and adults : impact by HIV and Mycobacterium tuberculosis co-infections. PLoS ONE, Vol. 10, H. 5 , e0126716.

Portevin, Damien and Pflüger, Valentin and Otieno, Patricia and Brunisholz, René and Vogel, Guido and Daubenberger, Claudia. (2015) Quantitative whole-cell MALDI-TOF MS fingerprints distinguishes human monocyte sub-populations activated by distinct microbial ligands. BMC biotechnology, Vol. 15 , 24.

Salim, Nahya and Knopp, Stefanie and Lweno, Omar and Abdul, Ummi and Mohamed, Ali and Schindler, Tobias and Rothen, Julian and Masimba, John and Kwaba, Denis and Mohammed, Alisa S. and Althaus, Fabrice and Abdulla, Salim and Tanner, Marcel and Daubenberger, Claudia and Genton, Blaise. (2015) Distribution and risk factors for Plasmodium and helminth co-infections: a cross-sectional survey among children in Bagamoyo district, coastal region of Tanzania. PLoS neglected tropical diseases, Vol. 9, H. 4 , e0003660.

Webster, B. L. and Rabone, M. and Pennance, T. and Emery, A. M. and Allan, F. and Gouvras, A. and Knopp, S. and Garba, A. and Hamidou, A. A. and Mohammed, K. A. and Ame, S. M. and Rollinson, D. and Webster, J. P.. (2015) Development of novel multiplex microsatellite polymerase chain reactions to enable high-throughput population genetic studies of Schistosoma haematobium. Parasites and Vectors, 8 (432).

Webster, B. L. and Rabone, M. and Pennance, T. and Emery, A. M. and Allan, F. and Gouvras, A. and Knopp, S. and Garba, A. and Hamidou, A. A. and Mohammed, K. A. and Ame, S. M. and Rollinson, D. and Webster, J. P.. (2015) Erratum to : Development of novel multiplex microsatellite polymerase chain reactions to enable high-throughput population genetic studies of Schistosoma haematobium. Parasites and Vectors, 8. p. 519.

2014

Knopp, Stefanie and Salim, Nahya and Schindler, Tobias and Karagiannis Voules, Dimitrios A. and Rothen, Julian and Lweno, Omar and Mohammed, Alisa S. and Singo, Raymond and Benninghoff, Myrna and Nsojo, Anthony A. and Genton, Blaise and Daubenberger, Claudia. (2014) Diagnostic accuracy of Kato-Katz, FLOTAC, Baermann, and PCR methods for the detection of light-intensity hookworm and Strongyloides stercoralis infections in Tanzania. American journal of tropical medicine and hygiene, Vol. 90, H. 3. pp. 535-545.

Mwakasungula, Solomon and Schindler, Tobias and Jongo, Said and Moreno, Elena and Kamaka, Kasimu and Mohammed, Mgeni and Joseph, Selina and Rashid, Ramla and Athuman, Thabit and Tumbo, Anneth Mwasi and Hamad, Ali and Lweno, Omar and Tanner, Marcel and Shekalaghe, Seif and Daubenberger, Claudia A.. (2014) Red blood cell indices and prevalence of hemoglobinopathies and glucose 6 phosphate dehydrogenase deficiencies in male Tanzanian residents of Dar es Salaam. International journal of molecular epidemiology and genetics, Vol. 5, H. 4. pp. 185-194.

Portevin, Damien and Moukambi, Felicien and Clowes, Petra and Bauer, Asli and Chachage, Mkunde and Ntinginya, Nyanda E. and Mfinanga, Elirehema and Said, Khadija and Haraka, Frederick and Rachow, Andrea and Saathoff, Elmar and Mpina, Maximilian and Jugheli, Levan and Lwilla, Fred and Marais, Ben J. and Hoelscher, Michael and Daubenberger, Claudia and Reither, Klaus and Geldmacher, Christof. (2014) Assessment of the novel T-cell activation marker-tuberculosis assay for diagnosis of active tuberculosis in children : a prospective proof-of-concept study. The Lancet infectious diseases, Vol. 14, H. 10. pp. 931-938.

Reither, Klaus and Katsoulis, Lynn and Beattie, Trevor and Gardiner, Nicolene and Lenz, Nicole and Said, Khadija and Mfinanga, Elirehema and Pohl, Christian and Fielding, Katherine L. and Jeffery, Hannah and Kagina, Benjamin M. and Hughes, Elisabeth J. and Scriba, Thomas J. and Hanekom, Willem A. and Hoff, Søren T. and Bang, Peter and Kromann, Ingrid and Daubenberger, Claudia and Andersen, Peter and Churchyard, Gavin J.. (2014) Safety and immunogenicity of H1/IC31®, an adjuvanted TB subunit vaccine, in HIV-infected adults with CD4+ lymphocyte counts greater than 350 cells/mm3 : a phase II, multi-centre, double-blind, randomized, placebo-controlled trial. PLoS ONE, Vol. 9, H. 12 , e114602.

Salim, Nahya and Schindler, Tobias and Abdul, Ummi and Rothen, Julian and Genton, Blaise and Lweno, Omar and Mohammed, Alisa S. and Masimba, John and Kwaba, Denis and Abdulla, Salim and Tanner, Marcel and Daubenberger, Claudia and Knopp, Stefanie. (2014) Enterobiasis and strongyloidiasis and associated co-infections and morbidity markers in infants, preschool- and school-aged children from rural coastal Tanzania : a cross-sectional study. BMC infectious diseases, Vol. 14 , 644.

Shekalaghe, Seif and Rutaihwa, Mastidia and Billingsley, Peter F. and Chemba, Mwajuma and Daubenberger, Claudia A. and James, Eric R. and Mpina, Maximillian and Ali Juma, Omar and Schindler, Tobias and Huber, Eric and Gunasekera, Anusha and Manoj, Anita and Simon, Beatus and Saverino, Elizabeth and Church, L. W. Preston and Hermsen, Cornelus C. and Sauerwein, Robert W. and Plowe, Christopher and Venkatesan, Meera and Sasi, Philip and Lweno, Omar and Mutani, Paul and Hamad, Ali and Mohammed, Ali and Urassa, Alwisa and Mzee, Tutu and Padilla, Debbie and Ruben, Adam and Sim, B. Kim Lee and Tanner, Marcel and Abdulla, Salim and Hoffman, Stephen L.. (2014) Controlled human malaria infection of Tanzanians by intradermal injection of aseptic, purified, cryopreserved Plasmodium falciparum sporozoites. American journal of tropical medicine and hygiene, Vol. 91, H. 3. pp. 471-480.

2013

Fischer, Anne and Liljander, Anne and Kaspar, Heike and Muriuki, Cecilia and Fuxelius, Hans-Henrik and Bongcam-Rudloff, Erik and de Villiers, Etienne P. and Huber, Charlotte A. and Frey, Joachim and Daubenberger, Claudia and Bishop, Richard and Younan, Mario and Jores, Joerg. (2013) Camel Streptococcus agalactiae populations are associated with specific disease complexes and acquired the tetracycline resistance gene tetM via a Tn916-like element. Veterinary research, Vol. 44 , 86.

Olds, C. and Bishop, R. and Daubenberger, C.. (2013) Anti-tick vaccines for the control of ticks affecting livestock. In: Molecular vaccines : from prophylaxis to therapy, Vol. 1. Wien, pp. 295-311.

Portevin, Damien and Young, Douglas. (2013) Natural killer cell cytokine response to M. bovis BCG is associated with inhibited proliferation, increased apoptosis and ultimate depletion of NKp44(+)CD56(bright) cells. PLoS ONE, Vol. 8, H. 7 , e68864.

2012

Daubenberger, C. A.. (2012) First clinical trial of purified, irradiated malaria sporozoites in humans. Expert review of vaccines, Vol. 11, H. 1. pp. 31-33.

Henson, S. and Bishop, R. P. and Morzaria, S. and Spooner, P. R. and Pelle, R. and Poveda, L. and Ebeling, M. and Kung, E. and Certa, U. and Daubenberger, C. A. and Qi, W.. (2012) High-resolution genotyping and mapping of recombination and gene conversion in the protozoan Theileria parva using whole genome sequencing. BMC genomics, Vol. 13 , 503.

Olds, C. and Mwaura, S. and Crowder, D. and Odongo, D. and van Oers, M. and Owen, J. and Bishop, R. and Daubenberger, C.. (2012) Immunization of cattle with Ra86 impedes Rhipicephalus appendiculatus nymphal-to-adult molting. Ticks and tick-borne diseases, Vol. 3, H. 3. pp. 170-178.

2011

Hatz, C. and van der Ploeg, R. and Beck, B. R. and Frosner, G. and Hunt, M. and Herzog, C.. (2011) Successful memory response following an up to 11 years delayed booster dose with a virosome-formulated hepatitis a vaccine (Epaxal(R)). Clinical and vaccine immunology, Vol. 18, H. 5. pp. 885-887.

Hatz, Christoph and Beck, Bernhard and Steffen, Robert and Genton, Blaise and d'Acremont, Valérie and Loutan, Louis and Hartmann, Katharina and Herzog, Christian. (2011) Real-life versus package insert : a post-marketing study on adverse-event rates of the virosomal hepatitis A vaccine Epaxal® in healthy travellers. Vaccine, 29 (31). pp. 5000-5006.

Mossdorf, E. and Stöckle, M. and Mwaigomole, E. G. and Chiweka, E. and Kibatala, P. L. and Geubbels, E. and Urassa, H. and Abdulla, S. and Elzi, L. and Tanner, M. and Furrer, H. and Hatz, C. and Battegay, M.. (2011) Improved antiretroviral treatment outcome in a rural African setting is associated with cART initiation at higher CD4 cell counts and better general health condition. BMC infectious diseases, Vol. 11 , 98.

Neumayr, Andreas and Troia, Giuliana and de Bernardis, Chiara and Tamarozzi, Francesca and Goblirsch, Sam and Piccoli, Luca and Hatz, Christoph and Filice, Carlo and Brunetti, Enrico. (2011) Justified concern or exaggerated fear : the risk of anaphylaxis in percutaneous treatment of cystic echinococcosis - a systematic literature review. PLoS neglected tropical diseases, Vol. 5, H. 6 , e1154.

2010

Barnett, E. D. and MacPherson, D. W. and Stauffer, W. M. and Loutan, L. and Hatz, C. F. and Matteelli, A. and Behrens, R. H.. (2010) The visiting friends or relatives traveler in the 21st century : time for a new definition. Journal of travel medicine, Vol. 17, H. 3. pp. 163-170.

Behrens, R. H. and Carroll, B. and Hellgren, U. and Visser, L. G. and Siikamaki, H. and Vestergaard, L. S. and Calleri, G. and Janisch, T. and Myrvang, B. and Gascon, J. and Hatz, C.. (2010) The incidence of malaria in travellers to South-East Asia : is local malaria transmission a useful risk indicator? Malaria Journal, Vol. 9 , 266.

Behrens, R. H. and Stauffer, W. M. and Barnett, E. D. and Loutan, L. and Hatz, C. F. and Matteelli, A. and MacPherson, D. W.. (2010) Travel case scenarios as a demonstration of risk assessment of VFR travelers: introduction to criteria and evidence-based definition and framework. Journal of Travel Medicine.

Forno, C. and Hausermann, P. and Hatz, C. and Itin, P. and Blum, J.. (2010) The difficulty in diagnosis and treatment of leprosy. Journal of Travel Medicine, Vol. 17, H. 4. pp. 281-283.

Frey, Sarabel G. and Chelo, David and Kinkela, Mina N. and Djoukoue, Florence and Tietche, Felix and Hatz, Christoph and Weber, Peter. (2010) Artesunate-mefloquine combination therapy in acute Plasmodium falciparum malaria in young children: a field study regarding neurological and neuropsychiatric safety. Malaria Journal, 9. p. 291.

Félix, R. C. and Müller, P. and Ribeiro, V. and Ranson, H. and Silveira, H.. (2010) Plasmodium infection alters Anopheles gambiae detoxification gene expression. BMC Genomics, 11 (1). p. 312.

Hatz, C. and Inoubli, S. and Loutan, L. and Genton, B. and Behrens, R. and Hufnagel, M.. (2010) Encéphalite japonaise : risque pour les populations vivant en zones d'endémie et pour les voyageurs. Revue médicale suisse : revue officielle de la Société médicale de la Suisse romande ... [et al.], 6. pp. 956-959.

Knopp, S. and Mohammed, K. A. and Speich, B. and Hattendorf, J. and Khamis, I. S. and Khamis, A. N. and Stothard, J. R. and Rollinson, D. and Marti, H. and Utzinger, J.. (2010) Albendazole and mebendazole administered alone or in combination with Ivermectin against Trichuris trichiura: a randomized controlled trial. Clinical Infectious Diseases, 51 (12). pp. 1420-1428.

Knopp, S. and Mohammed, K. A. and Stothard, J. R. and Khamis, I. S. and Rollinson, D. and Marti, H. and Utzinger, J.. (2010) Patterns and Risk Factors of Helminthiasis and Anemia in a Rural and a Peri-urban Community in Zanzibar, in the Context of Helminth Control Programs. PLoS Neglected Tropical Diseases, 4 (5). e681.

Matteelli, A. and Stauffer, W. M. and Barnett, E. D. and MacPherson, D. W. and Loutan, L. and Hatz, C. and Behrens, R. H.. (2010) Is a new definition required for travelers who visit friends and relatives? Journal of Travel Medicine, 17 (6). pp. 430-431.

Mossdorf, Erik and Stoeckle, Marcel and Vincenz, Anja and Mwaigomole, Emmanuel Geofrey and Chiweka, Evarist and Kibatala, Patience and Urassa, Honoraty and Abdulla, Salim and Elzi, Luigia and Tanner, Marcel and Furrer, Hansjakob and Hatz, Christoph and Battegay, Manuel. (2010) Impact of a national HIV voluntary counselling and testing (VCT) campaign on VCT in a rural hospital in Tanzania. Tropical Medicine and International Health, 15 (5). pp. 567-573.

Navarini, Alexander A. and Stoeckle, Marcel and Navarini, Susanne and Mossdorf, Erik and Jullu, Boniphace S. and Mchomvu, Rehema and Mbata, Marco and Kibatala, Patience and Tanner, Marcel and Hatz, Christoph and Schmid-Grendelmeier, Peter. (2010) Antihistamines are superior to topical steroids in managing human immunodeficiency virus (HIV)-associated papular pruritic eruption. International journal of dermatology, 49 (1). pp. 83-86.

Tietche, F. and Chelo, D. and Mina Ntoto, N. K. and Djoukoue, F. M. and Hatz, C. and Frey, S. and Frentzel, A. and Trapp, S. and Zielonka, R. and Mueller, E. A.. (2010) Tolerability and efficacy of a pediatric granule formulation of artesunate-mefloquine in young children from Cameroon with uncomplicated falciparum malaria. American Journal of Tropical Medicine and Hygiene, Vol. 82, H. 6. pp. 1034-1040.

Utzinger, J. and Botero-Kleiven, S. and Castelli, F. and Chiodini, P. L. and Edwards, H. and Köhler, N. and Gulletta, M. and Lebbad, M. and Manser, M. and Matthys, B. and N'Goran, E. K. and Tannich, E. and Vounatsou, P. and Marti, H.. (2010) Microscopic diagnosis of sodium acetate-acetic acid-formalin-fixed stool samples for helminths and intestinal protozoa: a comparison among European reference laboratories. Clinical Microbiology and Infection, 16 (3). pp. 267-273.

2009

Hatz, Christoph and Werlein, Jutta and Mutsch, Margot and Hufnagel, Markus and Behrens, Ron H.. (2009) Japanese encephalitis: defining risk incidence for travelers to endemic countries and vaccine prescribing from the UK and Switzerland. Journal of travel medicine, Vol. 16, H. 3. pp. 200-203.

Jackson, Y. and Myers, C. and Diana, A. and Marti, H. P. and Wolff, H. and Chappuis, F. and Loutan, L. and Gervaix, A.. (2009) Congenital transmission of Chagas disease in Latin American immigrants in Switzerland. Emerging infectious diseases, Vol. 15, H. 4. pp. 601-603.

Luessi, F. and Sollors, J. and Torzewski, M. and Muller, H. D. and Siegel, E. and Blum, J. and Sommer, C. and Vogt, T. and Thomke, F.. (2009) Eosinophilic meningitis due to Angiostrongylus cantonensis in Germany. Journal of travel medicine, Vol. 16, H. 4. pp. 292-294.

Veit, O. and Niedrig, M. and Chapuis-Taillard, C. and Cavassini, M. and Mossdorf, E. and Schmid, P. and Bae, H. G. and Litzba, N. and Staub, T. and Hatz, C. and Furrer, H.. (2009) Immunogenicity and safety of yellow fever vaccination for 102 HIV-infected patients. Clinical infectious diseases, Vol. 48, H. 5. pp. 659-666.