Items where Author is "Abrahams, Jan Pieter"
Number of items: 113. 2022Mohammed, Inayathulla and Schmitz, Kai A. and Schenck, Niko and Balasopoulos, Dimitrios and Topitsch, Annika and Maier, Timm and Abrahams, Jan Pieter. (2022) Catalytic cycling of human mitochondrial Lon protease. Structure, 30 (9). pp. 1254-1268.e7. 8 July 2020Blum, Thorsten B. and Housset, Dominique and Clabbers, Max T. B. and van Genderen, Eric and Bacia-Verloop, Maria and Zander, Ulrich and McCarthy, Andrew A. and Schoehn, Guy and Li Ling, Wai and Abrahams, Jan Pieter. (2020) Statistically correcting dynamical electron scattering improves refinement of protein nanocrystals, including charge refinement of coordinated metals. 25 March 2020Matz, Joachim M. and Drepper, Benjamin and Blum, Thorsten B. and van Genderen, Eric and Burrell, Alana and Martin, Peer and Stach, Thomas and Collinson, Lucy and Abrahams, Jan Pieter and Matuschewski, Kai and Blackman, Michael J.. (2020) A lipocalin mediates unidirectional haem biomineralization in malaria parasites. bioRxiv. 2020Matz, Joachim M. and Drepper, Benjamin and Blum, Thorsten B. and van Genderen, Eric and Burrell, Alana and Martin, Peer and Stach, Thomas and Collinson, Lucy M. and Abrahams, Jan Pieter and Matuschewski, Kai and Blackman, Michael J.. (2020) A lipocalin mediates unidirectional heme biomineralization in malaria parasites. Proceedings of the National Academy of Sciences of the United States of America, 117 (28). pp. 16546-16556. Zhang, Zhenzhen and Wen, Kai and Zhang, Chao and Laroche, Fabrice and Wang, Zhenglong and Zhou, Qiang and Liu, Zunfeng and Abrahams, Jan Pieter and Zhou, Xiang. (2020) Extracellular Nanovesicle Enhanced Gene Transfection Using Polyethyleneimine in HEK293T Cells and Zebrafish Embryos. Frontiers in Bioengineering and Biotechnology, 8. p. 448. Thakkar, Pooja and Guzenko, Vitaliy A. and Lu, Peng-Han and Dunin-Borkowski, Rafal E. and Abrahams, Jan Pieter and Tsujino, Soichiro. (2020) Fabrication of low aspect ratio three-element Boersch phase shifters for voltage-controlled three electron beam interference. Journal of Applied Physics, 128 (13). p. 134502. Xiao, Xiansha and Elsayed, Somayah S. and Wu, Changsheng and van der Heul, Helga U. and Metsä-Ketelä, Mikko and Du, Chao and Prota, Andrea E. and Chen, Chun-Chi and Liu, Weidong and Guo, Rey-Ting and Abrahams, Jan Pieter and van Wezel, Gilles P.. (2020) Functional and Structural Insights into a Novel Promiscuous Ketoreductase of the Lugdunomycin Biosynthetic Pathway. ACS Chemical Biology, 15 (9). pp. 2529-2538. Merg, Andrea D. and Touponse, Gavin and van Genderen, Eric and Blum, Thorsten B. and Zuo, Xiaobing and Bazrafshan, Alisina and Siaw, Hew Ming Helen and McCanna, Arthur and Dyer, R. Brian and Salaita, Khalid and Abrahams, Jan Pieter and Conticello, Vincent P.. (2020) Shape-Shifting Peptide Nanomaterials: Surface Asymmetry Enables pH-Dependent Formation and Interconversion of Collagen Tubes and Sheets. Journal of the American Chemical Society, 142 (47). pp. 19956-19968. 2019Merg, Andrea D. and Touponse, Gavin and van Genderen, Eric and Zuo, Xiaobing and Bazrafshan, Alisina and Blum, Thorsten and Hughes, Spencer and Salaita, Khalid and Abrahams, Jan Pieter and Conticello, Vincent P.. (2019) 2D Crystal Engineering of Nanosheets Assembled from Helical Peptide Building Blocks. Angewandte Chemie (International ed. in English), 58 (38). pp. 13507-13512. Gemmi, Mauro and Mugnaioli, Enrico and Gorelik, Tatiana E. and Kolb, Ute and Palatinus, Lukas and Boullay, Philippe and Hovmöller, Sven and Abrahams, Jan Pieter. (2019) 3D Electron Diffraction: The Nanocrystallography Revolution. ACS central science, 5 (8). pp. 1315-1329. Latychevskaia, Tatiana and Abrahams, Jan Pieter. (2019) Inelastic scattering and solvent scattering reduce dynamical diffraction in biological crystals. Acta Crystallographica Section B-Structural Science Crystal Engineering and Materials, 75. pp. 523-531. Clabbers, Max T. B. and Gruene, Tim and van Genderen, Eric and Abrahams, Jan Pieter. (2019) Reducing dynamical electron scattering reveals hydrogen atoms. Acta crystallographica. Section A, Foundations and advances, 75 (Pt 1). pp. 82-93. Merg, Andrea D. and van Genderen, Eric and Bazrafshan, Alisina and Su, Hanquan and Zuo, Xiaobing and Touponse, Gavin and Blum, Thorsten B. and Salaita, Khalid and Abrahams, Jan Pieter and Conticello, Vincent P.. (2019) Seeded Heteroepitaxial Growth of Crystallizable Collagen Triple Helices: Engineering Multifunctional Two-Dimensional Core-Shell Nanostructures. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 141 (51). pp. 20107-20117. Moradi, Mina and Opara, Nadia L. and Tulli, Ludovico G. and Wäckerlin, Christian and Dalgarno, Scott J. and Teat, Simon J. and Baljozovic, Milos and Popova, Olha and van Genderen, Eric and Kleibert, Armin and Stahlberg, Henning and Abrahams, Jan Pieter and Padeste, Celestino and Corvini, Philippe F.-X. and Jung, Thomas A. and Shahgaldian, Patrick. (2019) Supramolecular architectures of molecularly thin yet robust free-standing layers. Science Advances, 5 (2). eaav4489. Wallin, Cecilia and Hiruma, Yoshitaka and Warmlander, Sebastian and Huvent, Isabelle and Jarvet, Juri and Abrahams, Jan Pieter and Graslund, Astrid and Lippens, Guy and Luo, Jinghui. (2019) The Neuronal Tau Protein Blocks In Vitro Fibrillation of the Amyloid-beta (A beta) Peptide. Biophysical Journal, 116 (3, Supplement 1). 306a. Blum, Thorsten B. and Filippidou, Sevasti and Fatton, Mathilda and Junier, Pilar and Abrahams, Jan Pieter. (2019) The wild-type flagellar filament of the Firmicute Kurthia at 2.8 Å resolution in vivo. Scientific reports, 9 (1). p. 14948. 2018Thomas, Brijith and Dubey, Rajeev K. and Clabbers, Max T. B. and Gupta, Karthick Babu Sai Sankar and van Genderen, Eric and Jager, Wolter F. and Abrahams, Jan Pieter and Sudholter, Ernst J. R. and de Groot, Huub J. M.. (2018) A Molecular Level Approach To Elucidate the Supramolecular Packing of Light-Harvesting Antenna Systems. Chemistry (Weinheim an der Bergstrasse, Germany), 24 (56). pp. 14989-14993. Tinti, Gemma and Fröjdh, Erik and van Genderen, Eric and Gruene, Tim and Schmitt, Bernd and de Winter, D. A. Matthijs and Weckhuysen, Bert M. and Abrahams, Jan Pieter. (2018) Electron crystallography with the EIGER detector. IUCrJ, 5 (Pt 2). pp. 190-199. Clabbers, Max T. B. and Abrahams, Jan Pieter. (2018) Electron diffraction and three-dimensional crystallography for structural biology. CRYSTALLOGRAPHY REVIEWS, 24 (3). pp. 176-204. Clabbers, Max T. B. and Gruene, Tim and Parkhurst, James M. and Abrahams, Jan Pieter and Waterman, David G.. (2018) Electron diffraction data processing with DIALS. Acta crystallographica. Section D, Structural biology, 74 (Pt 6). pp. 506-518. Abrahams, Jan Pieter and Clabbers, Max and van Genderen, Eric and Blum, Thorsten. (2018) Electron tomography of radiation sensitive 3D nano-crystals in imaging and diffraction mode. Acta Crystallographica A-Foundation And Advances, 74. E83. Clabbers, Max and Gruene, Tim and van Genderen, Eric and Abrahams, Jan Pieter. (2018) Experimental and computational reduction of dynamical electron scattering allows visualizing individual hydrogen atoms. Acta Crystallographica A-Foundation And Advances, 74. E426. Wallin, Cecilia and Hiruma, Yoshitaka and Wärmländer, Sebastian K. T. S. and Huvent, Isabelle and Jarvet, Jüri and Abrahams, Jan Pieter and Gräslund, Astrid and Lippens, Guy and Luo, Jinghui. (2018) The Neuronal Tau Protein Blocks in Vitro Fibrillation of the Amyloid-β (Aβ) Peptide at the Oligomeric Stage. Journal of the American Chemical Society. pp. 8138-8146. November 2017Matheson, John and Moldovan, G. and Kirkland, Angus and Allinson, Nigel and Abrahams, Jan Pieter. (2017) Testing and Comparison of Imaging Detectors for Electrons in the Energy Range 10–20 keV. Journal of Instrumentation, 12 (11). C11016. 2017Yin, Qu and Liu, Zunfeng and Laroche, Fabrice and Zhou, Xiang and Shao, Ningning and Lin, Bencai and Wang, Run and Yuan, Ningyi and Ding, Jianning and Abrahams, Jan Pieter. (2017) A Novel Capturing Method for Quantification of Extra-Cellular Nanovesicles. Journal of nanoscience and nanotechnology, 17 (2). pp. 908-913. Nederlof, Igor and van Genderen, Eric and Clabbers, Maddox E. and Abrahams, Jan Pieter. (2017) Electron Crystallography of Protein Nano-Crystals. Acta Crystallographica Section A: Foundations And Advances, A73. a297-a298. Su, Jian and Wang, Hongyan and Wu, Kunkun and Liu, Zhongsheng and Yin, Qu and Wang, Run and Lv, Wei and Yin, Shougen and Liu, Zunfeng and Abrahams, Jan Pieter. (2017) Neutravidin-Mediated Extraction of Isolated Small Diameter Single Walled Carbon Nanotubes for Bio-Recognition. Journal of nanoscience and nanotechnology, 17 (5). pp. 3588-3596. Clabbers, Max T. B. and van Genderen, Eric and Wan, Wei and Wiegers, Emiel L. and Gruene, Tim and Abrahams, Jan Pieter. (2017) Protein structure determination by electron diffraction using a single three-dimensional nanocrystal. Acta crystallographica. Section D, Structural biology, 73 (Pt 9). pp. 738-748. Wang, Run and Boleij, Marissa and Yin, Qu and Galjart, Niels and Lin, Bencai and Yuan, Ningyi and Zhou, Xiang and Tan, Ming and Ding, Jianning and Liu, Zunfeng and Abrahams, Jan Pieter. (2017) Purification of Biotinylated Proteins Using Single Walled Carbon Nanotube-Streptavidin Complexes. Journal of nanoscience and nanotechnology, 17 (2). pp. 926-931. Nikolopoulos, Stavros and Galanis, Athanasios S. and Vallcorba, Oriol and Eggeman, Alex and Das, Partha Pratim and Abrahams, Jan Pieter and Rauch, Edgar and Midgley, Paul and Gemmi, Mauro. (2017) Random electron diffraction tomography for structure analysis of pharmaceuticals. Acta Crystallographica A-Foundation And Advances, 73. c980. 2016Wallin, Cecilia and Kulkarni, Yashraj S. and Abelein, Axel and Jarvet, Jüri and Liao, Qinghua and Strodel, Birgit and Olsson, Lisa and Luo, Jinghui and Abrahams, Jan Pieter and Sholts, Sabrina B. and Roos, Per M. and Kamerlin, Shina C. L. and Gräslund, Astrid and Wärmländer, Sebastian K. T. S.. (2016) Characterization of Mn(II) ion binding to the amyloid-β peptide in Alzheimer's disease. Journal of Trace Elements in Medicine and Biology, 38. pp. 183-193. Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Abrahams, Jan Pieter. (2016) Cross-interactions between the Alzheimer Disease Amyloid-β Peptide and Other Amyloid Proteins: A Further Aspect of the Amyloid Cascade Hypothesis. Journal of Biological Chemistry, 291 (32). pp. 16485-16493. Abrahams, Jan Pieter. (2016) Electron nanodiffraction for structural biology. Acta Crystallographica A-Foundation And Advances, 72 (a1). s6. Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Abrahams, Jan Pieter. (2016) Reciprocal Molecular Interactions between the Aβ Peptide Linked to Alzheimer's Disease and Insulin Linked to Diabetes Mellitus Type II. ACS Chemical Neuroscience , 7 (3). pp. 269-274. Tiiman, Ann and Luo, Jinghui and Wallin, Cecilia and Olsson, Lisa and Lindgren, Joel and Jarvet, Jϋri and Per, Roos and Sholts, Sabrina B. and Rahimipour, Shai and Abrahams, Jan Pieter and Karlström, Amelie Eriksson and Gräslund, Astrid and Wärmländer, Sebastian K. T. S.. (2016) Specific Binding of Cu(II) Ions to Amyloid-Beta Peptides Bound to Aggregation-Inhibiting Molecules or SDS Micelles Creates Complexes that Generate Radical Oxygen Species. Journal of Alzheimer's Disease, 54 (3). pp. 971-982. 2015Clabbers, Max T. B. and van Genderen, Eric and Nederlof, Igor and Li, Yao-Wang and Abrahams, Jan Pieter. (2015) Electron crystallography of 3D nano-crystals. Acta Crystallographica A-Foundation And Advances, 71. S405. Abrahams, Jan Pieter and van Genderent, Eric and Nederlof, Igor and Clabbers, Max and Li, Yaowang. (2015) Electron diffraction and imaging of 3D nanocrystals of pharmaceuticals, peptides and proteins. Acta Crystallographica A-Foundation And Advances, 71. S103. February 2014Luo, Jinghui and Abrahams, Jan Pieter. (2014) Cyclic Peptides as Inhibitors of Amyloid Fibrillation. Chemistry - A European Journal, 20 (9). pp. 2410-2419. 2014Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Abrahams, Jan Pieter. (2014) Alzheimer Peptides Aggregate into Transient Nanoglobules That Nucleate Fibrils. Biochemistry, 53 (40). pp. 6302-6308. Luo, Jinghui and Mohammed, Inayathulla and Warmlander, Sebastian K. T. S. and Hiruma, Yoshitaka and Graslund, Astrid and Abrahams, Jan Pieter. (2014) Endogenous Polyamines Reduce the Toxicity of Soluble A beta Peptide Aggregates Associated with Alzheimer's Disease. Biomacromolecules, 15 (6). pp. 1985-1991. Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Abrahams, Jan Pieter. (2014) Non-chaperone Proteins Can Inhibit Aggregation and Cytotoxicity of Alzheimer Amyloid beta Peptide. Journal of Biological Chemistry, 289 (40). pp. 27766-27775. Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Chien-Hung, Yu and Muhammad, Kamran and Gräslund, Astrid and Abrahams, Jan Pieter. (2014) The Aβ peptide forms non-amyloid fibrils in the presence of carbon nanotubes. Nanoscale, 6 (12). pp. 6720-6726. Abelein, Axel and Abrahams, Jan Pieter and Danielsson, Jens and Graslund, Astrid and Jarvet, Juri and Luo, Jinghui and Tiiman, Ann and Warmlander, Sebastian K. T. S.. (2014) The hairpin conformation of the amyloid beta peptide is an important structural motif along the aggregation pathway. Journal of Biological Inorganic Chemistry, 19 (4-5). pp. 623-634. March 2013Liu, Zunfeng and Voskamp, Patrick and Zhang, Yue and Chu, Fuqiang and Abrahams, Jan Pieter. (2013) Capture of unstable protein complex on the streptavidin-coated single-walled carbon nanotubes. Journal of Nanoparticle Research, 15 (4). A 1582. 2013Nederlof, Igor and van Genderen, Eric and Li, Yao-Wang and Abrahams, Jan Pieter. (2013) A Medipix quantum area detector allows rotation electron diffraction data collection from submicrometre three-dimensional protein crystals. Acta Crystallographica. Section D, Biological Crystallography, 69. pp. 1223-1230. Luo, Jinghui and Zwier, Raphael and Abrahams, Jan Pieter. (2013) An efficient nanolitre-volume multi-channel device for highly viscous materials used in membrane protein crystallization. Journal of applied crystallography, 46. pp. 829-831. Luo, Jinghui and Yu, Chien-Hung and Yu, Huixin and Borstnar, Rok and Kamerlin, Shina C. L. and Gräslund, Astrid and Abrahams, Jan Pieter and Wärmländer, Sebastian K. T. S.. (2013) Cellular Polyamines Promote Amyloid-Beta (A beta) Peptide Fibrillation and Modulate the Aggregation Pathways. ACS Chemical Neuroscience , 4 (3). pp. 454-462. Luo, Jinghui and Yu, Chien-Hung and Yu, Huixin and Borstnar, Rok and Kamerlin, Shina C. L. and Gräslund, Astrid and Abrahams, Jan Pieter and Wärmländer, Sebastian K. T. S.. (2013) Cellular Polyamines Promote Amyloid-Beta Peptide Fibrillation and Modulate the Aggregation Pathways. Biophysical Journal, 104 (2). 389A. Luo, Jinghui and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Abrahams, Jan Pieter. (2013) Human lysozyme inhibits the in vitro aggregation of Aβ peptides, which in vivo are associated with Alzheimer's disease. Chemical Communications , 49 (58). pp. 6507-6509. Nederlof, Igor and Li, Yao Wang and van Heel, Marin and Abrahams, Jan Pieter. (2013) Imaging protein three-dimensional nanocrystals with cryo-EM. Acta Crystallographica. Section D, Biological Crystallography, 69. pp. 852-859. Luo, Jinghui and Otero, Jose M. and Yu, Chien-Hung and Wärmländer, Sebastian K. T. S. and Gräslund, Astrid and Overhand, Mark and Abrahams, Jan Pieter. (2013) Inhibiting and Reversing Amyloid‐β Peptide (1–40) Fibril Formation with Gramicidin S and Engineered Analogues. Chemistry - A European Journal, 19 (51). pp. 17338-17348. ten Bruggencate, Filip and Laroche, Fabrice and Zhang, Yue and Song, Guoqiang and Yin, Shougen and Abrahams, Jan Pieter and Liu, Zunfeng. (2013) Visualizing the localization of transfection complexes during graphene nanoparticle-based transfection. Journal of Materials Chemistry B, 1 (46). pp. 6353-6358. 2012Liu, Zunfeng and Galli, Federica and Waterreus, Willem-Jan and Meulenbroek, Elisabeth and Koning, Roman I. and Lamers, Gerda E. M. and Olsthoorn, René C. L. and Pannu, Navraj and Oosterkamp, Tjerk H. and Koster, Abraham J. and Dame, Remus T. and Abrahams, Jan Pieter. (2012) Single-walled carbon nanotubes as scaffolds to concentrate DNA for the study of DNA-protein interactions. ChemPhysChem, 13 (6). pp. 1569-1575. Meulenbroek, Elisabeth M. and Thomassen, Ellen A. J. and Pouvreau, Laurice and Abrahams, Jan Pieter and Gruppen, Harry and Pannu, Navraj S.. (2012) Structure of a post-translationally processed heterodimeric double-headed Kunitz-type serine protease inhibitor from potato. Acta Crystallographica. Section D, Biological Crystallography, 68 (Pt 7). pp. 794-799. 2011Waterreus, Willem-Jan and Skubák, Pavol and Sikharulidze, Irakli and Abrahams, Jan Pieter and de Graaff, Rudolf A. G. and Pannu, Navraj S.. (2011) Advances in the CRANK software suite for automated crystal structure solution. Acta Crystallographica A-Foundation And Advances, 67. C659. Nederlof, Igor and Georgieva, Dilyana and Abrahams, Jan Pieter. (2011) Electron diffraction of submicron 3D protein crystals. Acta Crystallographica A-Foundation And Advances, 67. C228. Jiang, Linhua and Georgieva, Dilyana and Nederlof, Igor and Liu, Zunfeng and Abrahams, Jan Pieter. (2011) Image processing and lattice determination for three-dimensional nanocrystals. Microscopy and Microanalysis, 17 (6). pp. 879-885. Pannu, Navraj S. and Waterreus, Willem Jan and Skubák, Pavol and Sikharulidze, Irakli and Abrahams, Jan Pieter and de Graaff, Rudolf A. G.. (2011) Recent advances in the CRANK software suite for experimental phasing. Acta Crystallographica. Section D, Biological Crystallography, 67 (Pt 4). pp. 331-337. 2010Liu, Zunfeng and Jiang, Linhua and Galli, Federica and Nederlof, Igor and Olsthoorn, René C. L. and Lamers, Gerda E. M. and Oosterkamp, Tjerk. H. and Abrahams, Jan Pieter. (2010) A Graphene Oxide˙Streptavidin Complex for Biorecognition - Towards Affinity Purification. Advanced Functional Materials, 20 (17). pp. 2857-2865. Jiang, Linhua and Liu, Zunfeng and Georgieva, Dilyana and Kuil, Maxim E. and Abrahams, Jan Pieter. (2010) A novel approximation method of CTF amplitude correction for 3D single particle reconstruction. Ultramicroscopy, 110 (4). pp. 350-358. Liu, Zunfeng and Galli, Federica and Janssen, Kjeld G. H. and Jiang, Linhua and van der Linden, Heiko J. and de Geus, Daniël C. and Voskamp, Patrick and Kuil, Maxim E. and Olsthoorn, René C. L. and Oosterkamp, Tjerk H. and Hankemeier, Thomas and Abrahams, Jan Pieter. (2010) Stable Single-Walled Carbon Nanotube-Streptavidin Complex for Biorecognition. Journal of Physical Chemistry C, 114 (10). pp. 4345-4352. Abrahams, Jan Pieter. (2010) The strong phase object approximation may allow extending crystallographic phases of dynamical electron diffraction patterns of 3D protein nano-crystals. Zeitschrift für Kristallographie - Crystalline Materials, 225 (2-3). pp. 67-76. 2009Jiang, Linhua and Georgieva, Dilyana and IJspeert, Kim and Abrahams, Jan Pieter. (2009) An intelligent peak search program for digital electron diffraction images of 3D nano-crystals. In: 2009 2nd International Congress on Image and Signal Processing. pp. 1-5. de Geus, Daniël C. and van Roon, Anne-Marie M. and Thomassen, Ellen A. J. and Hokke, Cornelis H. and Deelder, André M. and Abrahams, Jan Pieter. (2009) Characterization of a diagnostic Fab fragment binding trimeric Lewis X. Proteins: Structure, Function, and Bioinformatics , 76 (2). pp. 439-447. de Geus, Daniël C. and Thomassen, Ellen A. J. and Hagedoorn, Peter-Leon and Pannu, Navraj S. and van Duijn, Esther and Abrahams, Jan Pieter. (2009) Crystal Structure of Chlorite Dismutase, a Detoxifying Enzyme Producing Molecular Oxygen. Journal of Molecular Biology, 387 (1). pp. 192-206. Meulenbroek, Elisabeth M. and Paspaleva, Keti and Thomassen, Ellen A. J. and Abrahams, Jan Pieter and Goosen, Nora and Pannu, Navraj S.. (2009) Involvement of a carboxylated lysine in UV damage endonuclease. Protein Science, 18 (3). pp. 549-558. Abrahams, Jan Pieter and Jiang, Linhua and Sikhuralidze, Irakli and Nederloff, Igor and Zandbergen, Henny and Georgieva, Dilyana. (2009) Macromolecular Electron Crystallography. Acta Crystallographica A-Foundation And Advances, 65. S7. van Haren, Jeffrey and Draegestein, Katharina and Keijzer, Nanda and Abrahams, Jan Pieter and Grosveld, Frank and Peeters, Pieter Johan and Moechars, Dieder and Galjart, Niels. (2009) Mammalian Navigators are Microtubule Plus-End Tracking Proteins that can Reorganize the Cytoskeleton to Induce Neurite-Like Extensions. Cell Motility and the Cytoskeleton , 66 (10). pp. 824-838. Waterreus, Willem-Jan and Pannu, Navraj and Skubák, Pavol and Sikharulidze, Irakli and Abrahams, Jan Pieter and de Graaff, R. A. G.. (2009) Recent Advances in CRANK. Acta Crystallographica A-Foundation And Advances, 65. S160. Jiang, Linhua and Georgieva, Dilyana and Zandbergen, Henny W. and Abrahams, Jan Pieter. (2009) Unit-cell determination from randomly oriented electron-diffraction patterns. Acta Crystallographica. Section D, Biological Crystallography, 65. pp. 625-632. 2008de Geus, Daniël C. and Thomassen, Ellen A. J. and van der Feltz, Clarisse L. and Abrahams, Jan Pieter. (2008) Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of chlorite dismutase: a detoxifying enzyme producing molecular oxygen. Acta Crystallographica Section F, 64. pp. 730-732. Jiang, Linhua and Schaffitzel, Christiane and Bingel-Erlenmeyer, Rpuven and Ban, Nenad and Korber, Philipp and Koning, Roman I. and Plaisier, Jasper R. and Abrahams, Jan Pieter. (2008) EMD-1455: Recycling of Aborted Ribosomal 50S Subunit-Nascent Chain-tRNA Complexes by the Heat Shock Protein Hsp15. Journal of Molecular Biology, 386 (5). 1357-1367. Zovko, Sandra and Abrahams, Jan Pieter and Koster, Abraham J. and Galjart, Niels and Mommaas, A. Mieke. (2008) Microtubule plus-end conformations and dynamics in the periphery of interphase mouse fibroblasts. Molecular Biology of the Cell, 19 (7). pp. 3138-3146. Abrahams, Jan Pieter and Georgieva, Dilyana and Jiang, Linhua and Zandbergen, Henny W.. (2008) Prospects for structure solution by electron diffraction of three-dimensional protein crystals. Acta Crystallographica A-Foundation And Advances, 64. C75-C76. 2007Paspaleva, Keti and Thomassen, Ellen and Pannu, Navraj S. and Iwai, Shigenori and Moolenaar, Geri F. and Goosen, Nora and Abrahams, Jan Pieter. (2007) Crystal structure of the DNA repair enzyme ultraviolet damage endonuclease. Structure, 15 (10). pp. 1316-1324. Plaisier, Jasper R. and Jiang, Linhua and Abrahams, Jan Pieter. (2007) Cyclops: New modular software suite for cryo-EM. Journal of structural biology, 157 (1). pp. 19-27. Schaffitzel, Christiane and Oswald, Miro and Berger, Imre and Ishikawa, Takashi and Abrahams, Jan Pieter and Koerten, Henk K. and Koning, Roman I. and Ban, Nenad. (2007) Erratum: Structure of the E-coli signal recognition particle bound to a translating ribosome (vol 444, pg 503, 2006). Nature, 448 (7157). p. 1076. Georgieva, Dilyana G. and Kuil, Maxim E. and Oosterkamp, Tjerk H. and Zandbergen, Henny W. and Abrahams, Jan Pieter. (2007) Heterogeneous nucleation of three-dimensional protein nanocrystals. Acta Crystallographica. Section D, Biological Crystallography, 63. pp. 564-570. 2006Kuil, Maxim E. and Abrahams, Jan Pieter and Marijnissen, Jan C. M.. (2006) Nano-dispensing by electrospray for biotechnology. Biotechnology journal, 1 (9). pp. 969-975. Schaffitzel, Christiane and Oswald, Miro and Berger, Imre and Ishikawa, Takashi and Abrahams, Jan Pieter and Koerten, Henk K. and Koning, Roman I. and Ban, Nenad. (2006) Structure of the E. coli signal recognition particle bound to a translating ribosome. Nature, 444 (7118). pp. 503-506. 2005Thomassen, Ellen A. J. and van Veen, Harrie A. and van Berkel, Patrick H. C. and Nuijens, Jan H. and Abrahams, Jan Pieter. (2005) The protein structure of recombinant human lactoferrin produced in the milk of transgenic cows closely matches the structure of human milk-derived lactoferrin. Transgenic Research, 14 (4). pp. 397-405. 2004Ness, Steven R. and de Graaff, R. A. G. and Abrahams, Jan Pieter and Pannu, Navraj S.. (2004) CRANK - New Methods for Automated Structure Solution. Acta Crystallographica A-Foundation And Advances, 60. S16. Ness, Steven R. and de Graaff, Rudolf A. G. and Abrahams, Jan Pieter and Pannu, Navraj S.. (2004) CRANK: new methods for automated macromolecular crystal structure solution. Structure, 12 (10). pp. 1753-1761. van Roon, Anne-Marie M. and Bink, Hugo H. J. and Plaisier, Jasper R. and Pleij, Cornelis W. A. and Abrahams, Jan Pieter and Pannu, Navraj S.. (2004) Crystal structure of an empty capsid of turnip yellow mosaic virus. Journal of Molecular Biology, 341 (5). pp. 1205-1214. Thomassen, Ellen A. J. and Pouvreau, Laurice and Gruppen, Harry and Abrahams, Jan Pieter. (2004) Crystallization and preliminary X-ray crystallographic studies on a Kunitz-type potato serine protease inhibitor. Acta Crystallographica. Section D, Biological Crystallography, 60 (Pt 8). pp. 1464-1466. Bos, Ineke G. A. and Lubbers, Yvonne T. P. and Eldering, Eric and Abrahams, Jan Pieter and Hack, C. Erik. (2004) Effect of reactive site loop elongation on the inhibitory activity of C1-inhibitor. Biochimica et Biophysica Acta - Proteins and Proteomics, 1699 (1-2). pp. 139-144. van Roon, Anne-Marie M. and Pannu, Navraj S. and de Vrind, Johannes P. M. and van der Marel, Gijs A. and van Boom, Jacques H. and Hokke, Cornelis H. and Deelder, André M. and Abrahams, Jan Pieter. (2004) Structure of an anti-Lewis X Fab fragment in complex with its Lewis X antigen. Structure, 12 (7). pp. 1227-1236. 2003Hilge, Mark and Siegal, Gregg and Vuister, Geerten W. and Güntert, Peter and Gloor, Sergio M. and Abrahams, Jan Pieter. (2003) ATP-induced conformational changes of the nucleotide-binding domain of Na,K-ATPase. Nature Structural Biology, 10 (6). pp. 468-474. Leliveld, Sirik R. and Zhang, Ying-Hui and Rohn, Jennifer L. and Noteborn, Mathieu H. M. and Abrahams, Jan Pieter. (2003) Apoptin induces tumor-specific apoptosis as a globular multimer. Journal of Biological Chemistry, 278 (11). pp. 9042-9051. Leliveld, Sirik R. and Dame, Remus T. and Mommaas, Mieke A. and Koerten, Henk K. and Wyman, Claire and Danen-van Oorschot, Astrid A. A. M. and Rohn, Jennifer L. and Noteborn, Mathieu H. M. and Abrahams, Jan Pieter. (2003) Apoptin protein multimers form distinct higher-order nucleoprotein complexes with DNA. Nucleic Acids Research, 31 (16). pp. 4805-4813. Abrahams, Jan Pieter and Thomassen, Ellen A. J.. (2003) Mechanism of thrombin's enigmatic sodium switch revealed. Structure, 11 (4). pp. 363-364. Leliveld, Sirik R. and Noteborn, Mathieu H. M. and Abrahams, Jan Pieter. (2003) Prevalent conformations and subunit exchange in the biologically active apoptin protein multimer. European Journal of Biochemistry, 270 (17). pp. 3619-3627. Zhang, Ying-Hui and Leliveld, S. Rutger and Kooistra, Klaas and Molenaar, Chris and Rohn, Jennifer L. and Tanke, Hans J. and Abrahams, Jan Pieter and Noteborn, Mathieu H. M.. (2003) Recombinant Apoptin multimers kill tumor cells but are nontoxic and epitope-shielded in a normal-cell-specific fashion. Experimental Cell Research, 289 (1). pp. 36-46. Bos, Ineke G. A. and Lubbers, Yvonne T. P. and Roem, Dorina and Abrahams, Jan Pieter and Hack, C. Erik and Eldering, Eric. (2003) The functional integrity of the serpin domain of C1-inhibitor depends on the unique N-terminal domain, as revealed by a pathological mutant. Journal of Biological Chemistry, 278 (32). pp. 29463-29470. Thomassen, Ellen and Gielen, Geriit and Schutz, Michael and Schoehn, Guy and Abrahams, Jan Pieter and Miller, Stefan and van Raaij, Mark J.. (2003) The structure of the receptor-binding domain of the bacteriophage T4 short tail fibre reveals a knitted trimeric metal-binding fold. Journal of Molecular Biology, 331 (2). pp. 361-373. Koning, Roman and van den Worm, Sjoerd and Plaisier, Jasper R. and van Duin, Jan and Abrahams, Jan Pieter and Koerten, Henk. (2003) Visualization by cryo-electron microscopy of genomic RNA that binds to the protein capsid inside bacteriophage MS2. Journal of Molecular Biology, 332 (2). pp. 415-422. 2002Kuil, Maxim E. and Bodenstaff, E. René and Hoedemaeker, Flip J. and Abrahams, Jan Pieter. (2002) Protein nano-crystallogenesis. Enzyme and Microbial Technology, 30 (3). pp. 262-265. Bos, Ineke G. A. and Hack, C. Erik and Abrahams, Jan Pieter. (2002) Structural and functional aspects of C1-Inhibitor. Immunobiology, 205 (4-5). pp. 518-533. 1999Hoedemaeker, Flip J. and Siegal, Gregg and Roe, S. Mark and Driscoll, Paul C. and Abrahams, Jan Pieter. (1999) Crystal structure of the C-terminal SH2 domain of the p85 alpha regulatory subunit of phosphoinositide 3-kinase: An SH2 domain mimicking its own substrate. Journal of Molecular Biology, 292 (4). pp. 763-770. 1997Jin, Lei and Abrahams, Jan Pieter and Skinner, Richard and Petitou, Maurice and Pike, Robert N. and Carrell, Robin W.. (1997) The anticoagulant activation of antithrombin by heparin. Proceedings of the National Academy of Sciences of the United States of America, 94 (26). pp. 14683-14688. Shirakihara, Yasuo and Leslie, Andrew G. W. and Abrahams, Jan Pieter and Walker, John E. and Ueda, Takashi and Sekimoto, Yoshinori and Kambara, Minoru and Saika, Kouji and Kagawa, Yasuo and Yoshida, Masasuke. (1997) The crystal structure of the nucleotide-free alpha 3 beta 3 subcomplex of F-1-ATPase from the thermophilic Bacillus PS3 is a symmetric trimer. Structure, 5 (6). pp. 825-836. 1996Elliott, Peter R. and Lomas, David A. and Carrell, Robin W. and Abrahams, Jan Pieter. (1996) Inhibitory conformation of the reactive loop of alpha(1)-antitrypsin. Nature Structural biology, 3 (8). pp. 676-681. Abrahams, Jan Pieter and Buchanan, Susan K. and van Raaij, Mark J. and Fearnley, Ian M. and Leslie, Andrew G. W. and Walker, John E.. (1996) The structure of bovine F-1-ATPase complexed with the peptide antibiotic efrapeptin. Proceedings of the National Academy of Sciences of the United States of America, 93 (18). pp. 9420-9424. 1994Abrahams, Jan Pieter and Leslie, Andrew G. W. and Lutter, René and Walker, John E.. (1994) Structure at 2.8 Â resolution of F1-ATPase from bovine heart mitochondria. Nature, 370 (6491). pp. 621-628. 1992Abrahams, Jan Pieter and Bosch, Leendert and Kraal, Barend and De Groot, Huub J. M. and Raap, Jan and Lugtenburg, Johan. (1992) Magic angle spinning carbon-13 NMR analysis of the complex of elongation factor Tu, GTP and (1-carbon-13) phenylalanyl-tRNA-Phe. Spectroscopy (Amsterdam), 10 (1-6). pp. 1-8. 1991Abrahams, Jan Pieter and Kraal, Barend and Clark, Brian F. C. and Bosch, Leendert. (1991) Isolation and stability of ternary complexes of elongation factor Tu, GTP and aminoacyl-tRNA. Nucleic Acids Research, 19 (3). pp. 553-556. Abrahams, Jan Pieter and Van Raaij, Mark. J. and Ott, Guenther and Kraal, Barend and Bosch, Leendert. (1991) Kirromycin drastically reduces the affinity of Escherichia coli elongation factor Tu for aminoacyl-tRNA. Biochemistry, 30 (27). pp. 6705-6710. Abrahams, Jan Pieter and Acampo, J. J. C. and Kraal, B. and Bosch, L.. (1991) The influence of tRNA located at the P-site on the turnover of EF-Tu·GTP on ribosomes. Biochimie, 73 (7-8). pp. 1089-1092. 1990Abrahams, Jan Pieter and Vandenberg, Mirjam and Van Batenburg, Eke and Pleij, Cornells. (1990) Prediction of RNA secondary structure, including pseudoknotting, by computer simulation. Nucleic Acids Research, 18 (10). pp. 3035-3044. Abrahams, Jan Pieter and Acampo, Jeannine J. C. and Ott, Günther and Sprinzl, Mathias and Degraaf, J. Martien and Talens, Anneke and Kraal, Barend. (1990) THE INTERACTION BETWEEN AMINOACYL-TRANSFER RNA AND THE MUTANT ELONGATION FACTOR-TUAR AND FACTOR-TUBO. Biochimica et Biophysica Acta (BBA) - Molecular Cell Research, 1050 (1-3). pp. 226-229. 1988Abrahams, Jan Pieter and Kraal, Barend and Bosch, Leendert. (1988) Zone-interference gel electrophoresis: a new method for studying weak protein-nucleic acid complexes under native equilibrium conditions. Nucleic Acids Research, 16 (21). pp. 10099-10108. 1986Pleij, C. W. A. and Abrahams, Jan Pieter and Van Belkum, Alex and Rietveld, Krijn and Bosch, Leendert. (1986) The Spatial Folding Of The 3' Noncoding Region Of Aminoacylatable Plant Viral RNAs. Journal of Cellular Biochemistry, 32 (10D). p. 274. 1985Van Belkum, Alex and Abrahams, Jan Pieter and Pleij, Cornelius W. A. and Bosch, Leendert. (1985) Five pseudoknots are present at the 204 nucleotides long 3' noncoding region of tobacco mosak virus RNA. Nucleic Acids Research, 13 (21). pp. 7673-7686. |
