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Ndege, R. and Ngome, O. and Vanobberghen, F. and Bani, F. and Temba, Y. and Wilson, H. and Hella, J. and Gingo, W. and Sasamalo, M. and Mnzava, D. and Kimera, N. and Hiza, H. and Wigayi, J. and Mapesi, H. and Kato, I. B. and Mhimbira, F. and Reither, K. and Battegay, M. and Paris, D. H. and Weisser, M. and Rohacek, M.. (2022) Ultrasound in managing extrapulmonary tuberculosis: a randomised, controlled, parallel, superiority, open-label trial. Clinical infectious diseases (in press). not yet available.

Bruningk, Sarah C. and Klatt, Juliane and Stange, Madlen and Mari, Alfredo and Brunner, Myrta and Roloff, Tim-Christoph and Seth-Smith, Helena M. B. and Schweitzer, Michael and Leuzinger, Karoline and Sogaard, Kirstine K. and Torres, Diana Albertos and Gensch, Alexander and Schlotterbeck, Ann-Kathrin and Nickel, Christian H. and Ritz, Nicole and Heininger, Ulrich and Bielicki, Julia and Rentsch, Katharina and Fuchs, Simon and Bingisser, Roland and Siegemund, Martin and Pargger, Hans and Ciardo, Diana and Dubuis, Olivier and Buser, Andreas and Tschudin-Sutter, Sarah and Battegay, Manuel and Schneider-Sliwa, Rita and Borgwardt, Karsten M. and Hirsch, Hans H. and Egli, Adrian. (2022) Determinants of SARS-CoV-2 transmission to guide vaccination strategy in an urban area. Virus Evolution, 8 (1). ARTN veac002.

Mari, Alfredo and Roloff, Tim and Stange, Madlen and Søgaard, Kirstine K. and Asllanaj, Erblin and Tauriello, Gerardo and Alexander, Leila Tamara and Schweitzer, Michael and Leuzinger, Karoline and Gensch, Alexander and Martinez, Aurélien E. and Bielicki, Julia and Pargger, Hans and Siegemund, Martin and Nickel, Christian H. and Bingisser, Roland and Osthoff, Michael and Bassetti, Stefano and Sendi, Parham and Battegay, Manuel and Marzolini, Catia and Seth-Smith, Helena M. B. and Schwede, Torsten and Hirsch, Hans H. and Egli, Adrian. (2021) Global Genomic Analysis of SARS-CoV-2 RNA Dependent RNA Polymerase Evolution and Antiviral Drug Resistance. Microorganisms, 9 (5). p. 1094.

Vanobberghen, F. and Weisser, M. and Kasuga, B. and Katende, A. and Battegay, M. and Tanner, M. and Glass, T. R. and Kiularco Study Group, . (2021) Mortality in a cohort of people living with HIV in rural Tanzania, accounting for unseen mortality among those lost to follow-up. Am J Epidemiol, 190 (2). pp. 251-264.

Stange, Madlen and Mari, Alfredo and Roloff, Tim and Seth-Smith, Helena M. B. and Schweitzer, Michael and Brunner, Myrta and Leuzinger, Karoline and Sogaard, Kirstine K. and Gensch, Alexander and Tschudin-Sutter, Sarah and Fuchs, Simon and Bielicki, Julia and Pargger, Hans and Siegemund, Martin and Nickel, Christian H. and Bingisser, Roland and Osthoff, Michael and Bassetti, Stefano and Schneider-Sliwa, Rita and Battegay, Manuel and Hirsch, Hans H. and Egli, Adrian. (2021) SARS-CoV-2 outbreak in a tri-national urban area is dominated by a B.1 lineage variant linked to a mass gathering event. PLoS Pathogens, 17 (3). ARTN e1009374.

Egli, Adrian and Saalfrank, Claudia and Goldman, Nina and Brunner, Myrta and Hollenstein, Yvonne and Vogel, Thomas and Augustin, Noémie and Wüthrich, Daniel and Seth-Smith, Helena M. B. and Roth, Elisa and Syedbasha, Mohammedyaseen and Mueller, Nicola F. and Vogt, Dominik and Bauer, Jan and Amar-Sliwa, Nadezhda and Meinel, Dominik M. and Dubuis, Olivier and Naegele, Michael and Tschudin-Sutter, Sarah and Buser, Andreas and Nickel, Christian H. and Zeller, Andreas and Ritz, Nicole and Battegay, Manuel and Stadler, Tanja and Schneider-Sliwa, Rita. (2019) Identification of influenza urban transmission patterns by geographical, epidemiological and whole genome sequencing data: protocol for an observational study. BMJ Open, 9 (8). e030913.

Leon-Reyes, Selene and Schäfer, Juliane and Früh, Mathias and Schwenkglenks, Matthias and Reich, Oliver and Schmidlin, Kurt and Staehelin, Cornelia and Battegay, Manuel and Cavassini, Matthias and Hasse, Barbara and Bernasconi, Enos and Calmy, Alexandra and Hoffmann, Matthias and Schoeni-Affolter, Franziska and Zhao, Hongwei and Bucher, Heiner C.. (2019) Cost estimates for HIV care and patient characteristics for health resource utilisation from linkage of claims data with the Swiss HIV Cohort Study. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 68. pp. 827-833.

Amstutz, Alain and Nsakala, Bienvenu Lengo and Vanobberghen, Fiona and Muhairwe, Josephine and Glass, Tracy Renée and Achieng, Beatrice and Sepeka, Mamorena and Tlali, Katleho and Sao, Lebohang and Thin, Kyaw and Klimkait, Thomas and Battegay, Manuel and Labhardt, Niklaus Daniel. (2018) SESOTHO trial ("Switch Either near Suppression Or THOusand") - switch to second-line versus WHO-guided standard of care for unsuppressed patients on first-line ART with viremia below 1000 copies/mL: protocol of a multicenter, parallel-group, open-label, randomized clinical trial in Lesotho, Southern Africa. BMC infectious diseases, 18 (1). p. 76.

Letang, Emilio and Verdastus Kalinjuma, Aneth and Glass, Tracy R. and Gamell, Anna and Mapesi, Herry and Sikalengo, George and Luwanda, Lameck Bonaventure and Mnzava, Dorcas and Ntamatungiro, Alex J. and Ndaki, Regina and Francis, Gideon and Vanobbergen, Fiona and Furrer, Hansjakob and Klimkait, Thomas and Felger, Ingrid and Tanner, Marcel and Hazt, Christoph and Weisser, Maja and Battegay, Manuel and Kiularco Study Group, . (2017) Cohort profile: the Kilombero and Ulanga Antiretroviral Cohort (KIULARCO): a prospective HIV cohort in rural Tanzania. Swiss Medical Weekly, 147. w14485.

Vanobberghen, Fiona and Letang, Emilio and Gamell, Anna and Mnzava, Dorcas K. and Faini, Diana and Luwanda, Lameck B. and Mapesi, Herry and Mwamelo, Kim and Sikalengo, George and Tanner, Marcel and Hatz, Christoph and Furrer, Hansjakob and Battegay, Manuel and Glass, Tracy R. and Kiularco Study Group, . (2017) A decade of HIV care in rural Tanzania: trends in clinical outcomes and impact of clinic optimisation in an open, prospective cohort. PLoS ONE, 12 (7). e0180983.

Erb, S. and Letang, E. and Glass, T. R. and Natamatungiro, A. and Mnzava, D. and Mapesi, H. and Haschke, M. and Duthaler, U. and Berger, B. and Muri, L. and Bader, J. and Marzolini, C. and Elzi, L. and Klimkait, T. and Langewitz, W. and Battegay, M. and Kilombero Ulanga Antiretroviral Cohort study group, . (2017) Health care provider communication training in rural Tanzania empowers HIV-infected patients on antiretroviral therapy to discuss adherence problems. HIV medicine, 18 (9). pp. 623-634.

Ntamatungiro, Alex J. and Muri, Lukas and Glass, Tracy R. and Erb, Stefan and Battegay, Manuel and Furrer, Hansjakob and Hatz, Christoph and Tanner, Marcel and Felger, Ingrid and Klimkait, Thomas and Letang, Emilio and Kiularco Study Group, . (2017) Strengthening HIV therapy and care in rural Tanzania affects rates of viral suppression. The journal of antimicrobial chemotherapy, 72 (7). pp. 2069-2074.

Nottera, J. and Labhardt, N. and Hatz, C. and Wallnöfer, A. and Vollgraff, M. and Ritze, N. and Wirza, S. and Berger, C. and Battegay, M. and Neumayr, A. and Fehr, J. and Jackson, Y. L. and Posfay-Barbej, K. and Durieux, S. and Lanzl, C. and Steahelin, C. and Boillat-Blanco, N. and Fuchs, S. and Martin, B. and Tarr, P.. (2016) Infektionen bei erwachsenen Flüchtlingen. Swiss medical forum = Schweizerisches Medizin-Forum, 16 (49-50). pp. 1067-1074.

Tarr, P. and Nottera, J. and Sydow, V. and Wirz, S. and Wallnöfer, A. and Vollgraff, M. and Neumayr, A. and Berger, C. and Battegay, M. and Fehr, J. and Jackson, Y. L. and Posfay-Barbej, K. and Durieux, S. and Ritze, N. and Staehelin, C. and Boillat-Blanco, N. and Fuchs, S. and Martin, B.. (2016) Impfungen bei erwachsenen Flüchtlingen. Swiss medical forum = Schweizerisches Medizin-Forum, 16 (49-50). pp. 1075-1079.

Notter, J. and Labhardt, N. and Hatz, C. and Wallnöfer, A. and Vollgraff, M. and Ritze, N. and Wirza, S. and Berger, C. and Battegay, M. and Neumayr, A. and Fehr, J. and Jackson, Y. L. and Posfay-Barbej, K. and Durieux, S. and Lanzl, C. and Staehelin, C. and Boillat-Blanco, N. and Fuchs, S. and Martin, B. and Tarr, P.. (2016) Infections chez les réfugiés adultes. Swiss medical forum = Schweizerisches Medizin-Forum, 16 (49-50). pp. 1067-1074.

Egli, A. and Schafer, J. and Osthoff, M. and Thiel, S. and Mikkelsen, C. and Rauch, A. and Hirsch, H. H. and Bucher, H. C. and Young, J. and Jensenius, J. C. and Battegay, M. and Trendelenburg, M.. (2013) Low levels of mannan-binding lectin or ficolins are not associated with an increased risk of cytomegalovirus disease in HIV-infected patients. PLoS ONE, 8 (1). e51983.

Gasser, O. and Brander, C. and Wolbers, M. and Brown, N. V. and Rauch, A. and Gunthard, H. F. and Battegay, M. and Hess, C.. (2013) Expansion of interferon-gamma-secreting HIV-specific T cells during successful antiretroviral therapy. HIV medicine, Vol. 14, H. 4. pp. 241-246.

Beerenwinkel, N. and Montazeri, H. and Schuhmacher, H. and Knupfer, P. and von Wyl, V. and Furrer, H. and Battegay, M. and Hirschel, B. and Cavassini, M. and Vernazza, P. and Bernasconi, E. and Yerly, S. and Boni, J. and Klimkait, T. and Cellerai, C. and Gunthard, H. F. and Swiss HIV Cohort Study, . (2013) The Individualized Genetic Barrier Predicts Treatment Response in a Large Cohort of HIV-1 Infected Patients. PLoS Computational Biology, Vol. 9, H. 8 , e1003203.

von Wyl, Viktor and Yerly, Sabine and Böni, Jürg and Shah, Cyril and Cellerai, Cristina and Klimkait, Thomas and Battegay, Manuel and Bernasconi, Enos and Cavassini, Matthias and Furrer, Hansjakob and Hirschel, Bernard and Vernazza, Pietro L. and Ledergerber, Bruno and Günthard, Huldrych F. and Swiss HIV Cohort Study, . (2012) Incidence of HIV-1 drug resistance among antiretroviral treatment-naive individuals starting modern therapy combinations. Clinical infectious diseases, Vol. 54, H. 1. pp. 131-140.

Stern, M. and Czaja, K. and Rauch, A. and Rickenbach, M. and Gunthard, H. F. and Battegay, M. and Fellay, J. and Hirschel, B. and Hess, C. and Swiss, H. I. V. Cohort Study Group. (2012) HLA-Bw4 identifies a population of HIV-infected patients with an increased capacity to control viral replication after structured treatment interruption. HIV medicine, Vol. 13, H. 10. pp. 589-595.

Egli, A. and Bucher, C. and Dumoulin, A. and Stern, M. and Buser, A. and Bubendorf, L. and Gregor, M. and Servida, P. and Sommer, G. and Bremerich, J. and Gratwohl, A. and Khanna, N. and Widmer, A. F. and Battegay, M. and Tamm, M. and Hirsch, H. H. and Halter, J. P.. (2012) Human metapneumovirus infection after allogeneic hematopoietic stem cell transplantation. Infection, 40 (6). pp. 677-684.

Porsche, M. and Kunzli, E. and Dickenmann, M. and Hirsch, H. H. and Battegay, M. and Khanna, N.. (2012) Fieber, Husten und Dyspnoe bei einer nierentransplantierten 38-jährigen Patientin. Der Internist, Vol. 53, H. 12. pp. 1484-1489.

Mossdorf, E. and Stöckle, M. and Mwaigomole, E. G. and Chiweka, E. and Kibatala, P. L. and Geubbels, E. and Urassa, H. and Abdulla, S. and Elzi, L. and Tanner, M. and Furrer, H. and Hatz, C. and Battegay, M.. (2011) Improved antiretroviral treatment outcome in a rural African setting is associated with cART initiation at higher CD4 cell counts and better general health condition. BMC infectious diseases, Vol. 11 , 98.

Battegay, M. and Manns, M. P.. (2011) Impfungen : Fortschritte und Evidenz. Der Internist, Vol. 52, no. 3. pp. 237-238.

Babouee, Baharak and Elzi, Luigia and Frei, Reno and Widmer, Andreas and Battegay, Manuel. (2011) A comment on Marschall et al. Clinical infectious diseases, Vol. 53, no. 7. p. 748.

Elzi, Luigia and Steffen, Ingrid and Furrer, Hansjakob and Fehr, Jan and Cavassini, Matthias and Hirschel, Bernard and Hoffmann, Matthias and Bernasconi, Enos and Bassetti, Stefano and Battegay, Manuel. (2011) Improved sensitivity of an interferon-gamma release assay (T-SPOT.TB?) in combination with tuberculin skin test for the diagnosis of latent tuberculosis in the presence of HIV co-infection. BMC Infectious Diseases, Vol. 11. p. 319.

Mossdorf, E. and Marzolini, C. and Fasel, D. and Mello Fayet, A. and Blum, C. and Donath, M. and Battegay, M.. (2011) [Drug-drug interactions with HIV treatments]. Schweizerische Rundschau für Medizin PRAXIS, Vol. 100. pp. 1193-1196.

von Wyl, Viktor and Kouyos, Roger D. and Yerly, Sabine and Böni, Jürg and Shah, Cyril and Bürgisser, Philippe and Klimkait, Thomas and Weber, Rainer and Hirschel, Bernard and Cavassini, Matthias and Staehelin, Cornelia and Battegay, Manuel and Vernazza, Pietro L. and Bernasconi, Enos and Ledergerber, Bruno and Bonhoeffer, Sebastian and Günthard, Huldrych F. and Swiss HIV Cohort Study, . (2011) The role of migration and domestic transmission in the spread of HIV-1 non-B subtypes in Switzerland. Journal of infectious diseases, Vol. 204, no. 7. pp. 1095-1103.

Hasse, Barbara and Ledergerber, Bruno and Furrer, Hansjakob and Battegay, Manuel and Hirschel, Bernhard and Cavassini, Matthias and Bertisch, Barbara and Bernasconi, Enos and Weber, Rainer and Swiss HIV Cohort Study, . (2011) Morbidity and aging in HIV-infected persons : the Swiss HIV cohort study. Clinical infectious diseases, Vol. 53, H. 11. pp. 1130-1139.

di Iulio, Julia and Ciuffi, Angela and Fitzmaurice, Karen and Kelleher, Dermot and Rotger, Margalida and Fellay, Jacques and Martinez, Raquel and Pulit, Sara and Furrer, Hansjakob and Günthard, Huldrych F. and Battegay, Manuel and Bernasconi, Enos and Schmid, Patrick and Hirschel, Bernard and Barnes, Eleanor and Klenerman, Paul and Telenti, Amalio and Rauch, Andri and Swiss HIV Cohort Study, . (2011) Estimating the net contribution of interleukin-28B variation to spontaneous hepatitis C virus clearance. Hepatology, Vol. 53, No. 5. pp. 1446-1454.

Battegay, Manuel and Arasteh, Keikawus and Plettenberg, Andreas and Bogner, Johannes R. and Livrozet, Jean-Michel and Witt, Mallory D. and Mossdorf, Erik and Yong, Chan-Loi and Zhang, Wei and Macha, Sreeraj and Berger, Frank and Stern, Jerry and Robinson, Patrick and Quinson, Anne-Marie. (2011) Bioavailability of extended-release nevirapine 400 and 300 mg in HIV-1 : a multicenter, open-label study. Clinical therapeutics, Vol. 33, H. 9. pp. 1308-1320.

Haas, Anna and Zimmermann, Kathrin and Graw, Frederik and Slack, Emma and Rusert, Peter and Ledergerber, Bruno and Bossart, Walter and Weber, Rainer and Thurnheer, Maria C. and Battegay, Manuel and Hirschel, Bernard and Vernazza, Pietro and Patuto, Nicola and Macpherson, Andrew J. and Günthard, Huldrych F. and Oxenius, Annette and Swiss HIV Cohort Study, . (2011) Systemic antibody responses to gut commensal bacteria during chronic HIV-1 infection. Gut, Vol. 60, H. 11. pp. 1506-1519.

Babouee, B. and Widmer, A. F. and Battegay, M.. (2011) [Vaccination against pneumococci and influenza. How good is the evidence?]. Der Internist, Vol. 52, no. 3. pp. 265-276.

Tschudin-Sutter, Sarah and Frei, Reno and Kampf, Günter and Tamm, Michael and Pflimlin, Eric and Battegay, Manuel and Widmer, Andreas Franz. (2011) Emergence of glutaraldehyde-resistant Pseudomonas aeruginosa. Infection Control and Hospital Epidemiology, 32 (12). pp. 1173-1178.

Young, J. and Scherrer, A. U. and Günthard, H. F. and Opravil, M. and Yerly, S. and Böni, J. and Rickenbach, M. and Fux, C. A. and Cavassini, M. and Bernasconi, E. and Vernazza, P. and Hirschel, B. and Battegay, M. and Bucher, H. C. and Swiss HIV Cohort Study, . (2011) Efficacy, tolerability and risk factors for virological failure of darunavir-based therapy for treatment-experienced HIV-infected patients : the Swiss HIV Cohort Study. HIV medicine, Vol. 12, H. 5. pp. 299-307.

Kaufmann, Gilbert R. and Elzi, Luigia and Weber, Rainer and Furrer, Hansjakob and Giulieri, Stefano and Vernazza, Pietro and Bernasconi, Enos and Hirschel, Bernard and Battegay, Manuel and Swiss HIV Cohort Study, . (2011) Interruptions of cART limits CD4 T-cell recovery and increases the risk for opportunistic complications and death. AIDS, Vol. 25, H. 4. pp. 441-451.

Scherrer, A. U. and von Wyl, V. and Boni, J. and Yerly, S. and Klimkait, T. and Burgisser, P. and Garzoni, C. and Hirschel, B. and Cavassini, M. and Battegay, M. and Vernazza, P. L. and Bernasconi, E. and Ledergerber, B. and Gunthard, H. F. and Swiss HIV Cohort Study Shcs, . (2011) Viral suppression rates in salvage treatment with raltegravir improved with the administration of genotypic partially active or inactive nucleoside/tide reverse transcriptase inhibitors. JAIDS, Vol. 57, H. 1. pp. 24-31.

Rotger, Margalida and Dalmau, Judith and Rauch, Andri and McLaren, Paul and Bosinger, Steven E. and Martinez, Raquel and Sandler, Netanya G. and Roque, Annelys and Liebner, Julia and Battegay, Manuel and Bernasconi, Enos and Descombes, Patrick and Erkizia, Itziar and Fellay, Jacques and Hirschel, Bernard and Miró, Jose M. and Palou, Eduard and Hoffmann, Matthias and Massanella, Marta and Blanco, Julià and Woods, Matthew and Günthard, Huldrych F. and de Bakker, Paul and Douek, Daniel C. and Silvestri, Guido and Martinez-Picado, Javier and Telenti, Amalio. (2011) Comparative transcriptomics of extreme phenotypes of human HIV-1 infection and SIV infection in sooty mangabey and rhesus macaque. Journal of Clinical Investigation, Vol. 121, H. 6. pp. 2391-2400.

Wyl, Viktor von and Gianella, Sara and Fischer, Marek and Niederoest, Barbara and Kuster, Herbert and Battegay, Manuel and Bernasconi, Enos and Cavassini, Matthias and Rauch, Andri and Hirschel, Bernard and Vernazza, Pietro and Weber, Rainer and Joos, Beda and Günthard, Huldrych F. and Swiss HIV Cohort Study-Shcs, . (2011) Early antiretroviral therapy during primary HIV-1 infection results in a transient reduction of the viral setpoint upon treatment interruption. PLoS ONE, Vol. 6, H. 11 , e27463.

Kouyos, R. D. and von Wyl, V. and Yerly, S. and Boni, J. and Rieder, P. and Joos, B. and Taffe, P. and Shah, C. and Burgisser, P. and Klimkait, T. and Weber, R. and Hirschel, B. and Cavassini, M. and Rauch, A. and Battegay, M. and Vernazza, P. L. and Bernasconi, E. and Ledergerber, B. and Bonhoeffer, S. and Gunthard, H. F. and Swiss HIV Cohort Study, . (2011) Ambiguous nucleotide calls from population-based sequencing of HIV-1 are a marker for viral diversity and the age of infection. Clinical infectious diseases, Vol. 52, H. 4. pp. 532-539.

Wandeler, Gilles and Keiser, Olivia and Hirschel, Bernard and Günthard, Huldrych F. and Bernasconi, Enos and Battegay, Manuel and Clerc, Olivier and Vernazza, Pietro L. and Furrer, Hansjakob and Swiss HIV Cohort Study, . (2011) A comparison of initial antiretroviral therapy in the Swiss HIV Cohort Study and the recommendations of the International AIDS Society-USA. PLoS ONE, Vol. 6, H. 12 , e27903.

Ledergerber, B. and Cavassini, M. and Battegay, M. and Bernasconi, E. and Vernazza, P. and Hirschel, B. and Furrer, H. and Rickenbach, M. and Weber, R. and Swiss HIV Cohort Study, . (2011) Trends over time of virological and immunological characteristics in the Swiss HIV Cohort Study. HIV medicine, Vol. 12, H. 5. pp. 279-288.

Gianella, Sara and von Wyl, Viktor and Fischer, Marek and Niederoest, Barbara and Battegay, Manuel and Bernasconi, Enos and Cavassini, Matthias and Rauch, Andri and Hirschel, Bernard and Vernazza, Pietro and Weber, Rainer and Joos, Beda and Günthard, Huldrych F. and Swiss HIV Cohort Study, . (2011) Effect of early antiretroviral therapy during primary HIV-1 infection on cell-associated HIV-1 DNA and plasma HIV-1 RNA. Antiviral therapy, Vol. 16, H. 4. pp. 535-545.

Marzolini, Catia and Back, David and Weber, Rainer and Furrer, Hansjakob and Cavassini, Matthias and Calmy, Alexandra and Vernazza, Pietro and Bernasconi, Enos and Khoo, Saye and Battegay, Manuel and Elzi, Luigia and Swiss HIV Cohort Study Members, . (2011) Ageing with HIV : medication use and risk for potential drug-drug interactions. The journal of antimicrobial chemotherapy, Vol. 66, H. 9. pp. 2107-2111.

Schüpbach, Jörg and Bisset, Leslie R. and Regenass, Stephan and Bürgisser, Philippe and Gorgievski, Meri and Steffen, Ingrid and Andreutti, Corinne and Martinetti, Gladys and Shah, Cyril and Yerly, Sabine and Klimkait, Thomas and Gebhardt, Martin and Schöni-Affolter, Franziska and Rickenbach, Martin and Swiss HIV Cohort Study, and Barth, J. and Battegay, M. and Bernascon, E. and Böni, J. and Bucher, H. C. and Bürgisser, P. and Burton-Jeangros, C. and Calmy, A. and Cavassini, M. and Dubs, R. and Egger, M. and Elzi, L. and Fehr, J. and Fischer, M. and Flepp, M. and Francioli, P. and Furrer, H. and Fux, C. A. and Gorgievski, M. and Günthard, H. and Hasse, B. and Hirsch, H. H. and Hirschel, B. and Hösli, I. and Kahlert, C. and Kaiser, L. and Keiser, O. and Kind, C. and Klimkait, T. and Kovari, H. and Ledergerber, B. and Martinetti, G. and Martinez de Tejada, B. and Müller, N. and Nadal, D. and Pantaleo, G. and Rauch, A. and Regenass, S. and Rickenbach, M. and Rudin, C. and Schmid, P. and Schultze, D. and Schöni-Affolter, F. and Schüpbach, J. and Speck, R. and Taffé, P. and Telenti, A. and Trkola, A. and Vernazza, P. and von Wyl, V. and Weber, R. and Yerly, S.. (2011) High specificity of line-immunoassay based algorithms for recent HIV-1 infection independent of viral subtype and stage of disease. BMC infectious diseases, Vol. 11 , 254. p. 254.

Koligi, K. and Mertz, D. and Benz, D. and Vogt, T. and Bloemberg, G. V. and Winter, L. and Tyndall, A. and Battegay, M. and Walker, U. A.. (2011) [Of bugs and joints. Oligoarthritis caused by Tropheryma whipplei]. Der Internist, Vol. 52, no. 7. pp. 884-888.

Fehr, Jan and Glass, Tracey R. and Louvel, Séverine and Hamy, François and Hirsch, Hans H. and von Wyl, Viktor and Böni, Jürg and Yerly, Sabine and Bürgisser, Philippe and Cavassini, Matthias and Fux, Christoph A. and Hirschel, Bernard and Vernazza, Pietro and Martinetti, Gladys and Bernasconi, Enos and Günthard, Huldrych F. and Battegay, Manuel and Bucher, Heiner C. and Klimkait, Thomas and Swiss HIV Cohort Study, . (2011) Replicative phenotyping adds value to genotypic resistance testing in heavily pre-treated HIV-infected individuals - the Swiss HIV Cohort Study. Journal of translational medicine, 9. p. 14.

Mossdorf, Erik and Stoeckle, Marcel and Vincenz, Anja and Mwaigomole, Emmanuel Geofrey and Chiweka, Evarist and Kibatala, Patience and Urassa, Honoraty and Abdulla, Salim and Elzi, Luigia and Tanner, Marcel and Furrer, Hansjakob and Hatz, Christoph and Battegay, Manuel. (2010) Impact of a national HIV voluntary counselling and testing (VCT) campaign on VCT in a rural hospital in Tanzania. Tropical Medicine and International Health, 15 (5). pp. 567-573.

Mertz, D. and Plagge, H. and Bassetti, S. and Battegay, M. and Widmer, A. F.. (2010) How much money can be saved by applying intravenous antibiotics once instead of several times a day? Infection, 38 (6). pp. 479-482.

Opravil, Milos and Klimkait, Thomas and Louvel, Severine and Wolf, Eva and Battegay, Manuel and Fux, Christoph A. and Bernasconi, Enos and Vogel, Martin and Speck, Roberto and Weber, Rainer and Swiss HIV Cohort Study, . (2010) Prior therapy influences the efficacy of lamivudine monotherapy in patients with lamivudine-resistant HIV-1 infection. JAIDS: journal of acquired immune deficiency syndromes, Vol. 54, H. 1. pp. 51-58.

Marzolini, Catia and Elzi, Luigia and Gibbons, Sara and Weber, Rainer and Fux, Christoph and Furrer, Hansjakob and Chave, Jean-Philippe and Cavassini, Matthias and Bernasconi, Enos and Calmy, Alexandra and Vernazza, Pietro and Khoo, Saye and Ledergerber, Bruno and Back, David and Battegay, Manuel and Swiss HIV Cohort Study, . (2010) Prevalence of comedications and effect of potential drug-drug interactions in the Swiss HIV Cohort Study. Antiviral Therapy, 15 (3). pp. 413-423.

Rohrbach, Janine and Robinson, Nicola and Harcourt, Gillian and Hammond, Emma and Gaudieri, Silvana and Gorgievski, Meri and Telenti, Amalio and Keiser, Olivia and Günthard Huldrych, F. and Hirschel, Bernhard and Hoffmann, Matthias and Bernasconi, Enos and Battegay, Manuel and Furrer, Hansjakob and Klenerman, Paul and Rauch, Andri and Swiss HIV Cohort Study, . (2010) Cellular immune responses to HCV core increase and HCV RNA levels decrease during successful antiretroviral therapy. Gut, Vol. 59, H. 9. pp. 1252-1258.

Vetter, M. and Battegay, M. and Trendelenburg, M.. (2010) Primary cytomegalovirus infection with accompanying Pneumocystis jiroveci pneumonia in a patient with large-vessel vasculitis. Infection, 38 (4). pp. 331-334.

Kovari, Helen and Ledergerber, Bruno and Battegay, Manuel and Rauch, Andri and Hirschel, Bernard and Foguena, Alain Kenfak and Vernazza, Pietro and Bernasconi, Enos and Mueller, Nicolas J. and Weber, Rainer. (2010) Incidence and risk factors for chronic elevation of alanine aminotransferase levels in HIV-infected persons without hepatitis b or c virus co-infection. Clinical infectious diseases, Vol. 50, H. 4. pp. 502-511.

Kouyos, Roger D. and von Wyl, Viktor and Yerly, Sabine and Böni, Jürg and Taffé, Patrick and Shah, Cyril and Bürgisser, Philippe and Klimkait, Thomas and Weber, Rainer and Hirschel, Bernard and Cavassini, Matthias and Furrer, Hansjakob and Battegay, Manuel and Vernazza, Pietro L. and Bernasconi, Enos and Rickenbach, Martin and Ledergerber, Bruno and Bonhoeffer, Sebastian and Günthard, Huldrych F.. (2010) Molecular epidemiology reveals long-term changes in HIV type 1 subtype B transmission in Switzerland. Journal of infectious diseases, Vol. 201, no. 10. pp. 1488-1497.

Widmer, A. F. and Battegay, M.. (2010) [Postoperative wound infections: essentials for the internal medicine]. Der Internist, Vol. 51, no. 2. pp. 142-153.

Widmer, A. and Gastmeier, P. and Battegay, M.. (2010) [Prevention of infections]. Der Internist, Vol. 51, no. 2. pp. 127-128.

Keiser, Olivia and Spoerri, Adrian and Brinkhof, Martin W. G. and Hasse, Barbara and Gayet-Ageron, Angéle and Tissot, Frédéric and Christen, Anna and Battegay, Manuel and Schmid, Patrick and Bernasconi, Enos and Egger, Matthias and Swiss HIV Cohort Study, and Swiss National Cohort, . (2010) Suicide in HIV-infected individuals and the general population in Switzerland, 1988-2008. American journal of psychiatry, Vol. 167, H. 2. pp. 143-150.

Tschudin-Sutter, Sarah and Frei, Reno and Battegay, Manuel and Hoesli, Irene and Widmer, Andreas F.. (2010) Extended spectrum ß-lactamase-producing Escherichia coli in neonatal care unit. Emerging infectious diseases, Vol. 16, H. 11. pp. 1758-1760.

Audigé, Annette and Taffé, Patrick and Rickenbach, Martin and Battegay, Manuel and Vernazza, Pietro and Nadal, David and Speck, Roberto F. and Swiss HIV Cohort Study, . (2010) Low postseroconversion CD4 count and rapid decrease of CD4 density identify HIV+ fast progressors. Aids research and human retroviruses, Vol. 26, H. 9. pp. 997-1005.

Glass, Tracy R. and Battegay, Manuel and Cavassini, Matthias and De Geest, Sabina and Furrer, Hansjakob and Vernazza, Pietro L. and Hirschel, Bernard and Bernasconi, Enos and Rickenbach, Martin and Günthard Huldrych, F. and Bucher, Heiner C. and Swiss HIV Cohort Study, . (2010) Longitudinal analysis of patterns and predictors of changes in self-reported adherence to antiretroviral therapy : Swiss HIV Cohort Study. JAIDS: journal of acquired immune deficiency syndromes, Vol. 54, H. 2. pp. 197-203.

Elzi, Luigia and Marzolini, Catia and Furrer, Hansjakob and Ledergerber, Bruno and Cavassini, Matthias and Hirschel, Bernard and Vernazza, Pietro and Bernasconi, Enos and Weber, Rainer and Battegay, Manuel and Swiss HIV Cohort Study, . (2010) Treatment modification in human immunodeficiency virus-infected individuals starting combination antiretroviral therapy between 2005 and 2008. JAMA Internal Medicine, 170 (1). pp. 57-65.

Khanlari, Bettina and Elzi, Luigia and Estermann, Laura and Weisser, Maja and Brett, Wolfgang and Grapow, Martin and Battegay, Manuel and Widmer, Andreas F. and Flückiger, Ursula. (2010) A rifampicin-containing antibiotic treatment improves outcome of staphylococcal deep sternal wound infections. The journal of antimicrobial chemotherapy, Vol. 65, H. 8. pp. 1799-1806.

Orasch, C. and Weisser, M. and Mertz, D. and Conen, A. and Heim, D. and Christen, S. and Gratwohl, A. and Battegay, M. and Widmer, A. and Flückiger, U.. (2010) Comparison of infectious complications during induction/consolidation chemotherapy versus allogeneic hematopoietic stem cell transplantation. Bone marrow transplantation, Vol. 45. pp. 521-526.

Aebi-Popp, Karoline and Lapaire, Olav and Glass, Tracy R. and Vilén, Louise and Rudin, Christoph and Elzi, Luigia and Battegay, Mannel and Keiser, Olivia and de Tejada, Begona Martinez and Hoesli, Irene M. and Swiss Mother, and Child HIV Cohort Study, . (2010) Pregnancy and delivery outcomes of HIV infected women in Switzerland 2003-2008. Journal of perinatal medicine, Vol. 38, H. 4. pp. 353-358.

Fritz, Stefanie and Mossdorf, Erik and Durovic, Bojana and Zenhaeusern, Gabriela and Conen, Anna and Steffen, Ingrid and Battegay, Manuel and Nüesch, Reto and Hess, Christoph. (2010) Virosomal influenza-vaccine induced immunity in HIV-infected individuals with high versus low CD4+ T-cell counts : clues towards a rational vaccination strategy. AIDS, Vol. 24, H. 14. pp. 2287-2289.

Rauch, Andri and Kutalik, Zoltán and Descombes, Patrick and Cai, Tao and Di Iulio, Julia and Mueller, Tobias and Bochud, Murielle and Battegay, Manuel and Bernasconi, Enos and Borovicka, Jan and Colombo, Sara and Cerny, Andreas and Dufour, Jean-François and Furrer, Hansjakob and Günthard Huldrych, F. and Heim, Markus and Hirschel, Bernard and Malinverni, Raffaele and Moradpour, Darius and Müllhaupt, Beat and Witteck, Andrea and Beckmann, Jacques S. and Berg, Thomas and Bergmann, Sven and Negro, Francesco and Telenti, Amalio and Bochud, Pierre-Yves and Swiss Hepatitis C. Cohort Study, and Swiss HIV Cohort Study, . (2010) Genetic variation in IL28B is associated with chronic hepatitis C and treatment failure : a genome-wide association study. Gastroenterology, Vol. 138, H. 4 , S. 1338-1345, 1345.e1-7.

Bucher, Heiner C. and Rickenbach, Martin and Young, Jim and Glass, Tracy R. and Vallet, Yannick and Bernasconi, Enos and Cavassini, Matthias and Fux, Christoph and Schiffer, Véronique and Vernazza, Pietro and Weber, Rainer and Battegay, Manuel and Swiss HIV Cohort Study, . (2010) Randomized trial of a computerized coronary heart disease risk assessment tool in HIV-infected patients receiving combination antiretroviral therapy. Antiviral therapy, Vol. 15, H. 1. pp. 31-40.

Mertz, D. and Frei, R. and Periat, N. and Scheidegger, C. and Battegay, M. and Seiler, W. and Widmer, A. F.. (2010) Eradication of an epidemic methicillin-resistant Staphylococcus aureus (MRSA) from a geriatric university hospital : evidence from a 10-year follow-up. European journal of clinical microbiology & infectious diseases, Vol. 29, H. 8. pp. 987-993.

Mertz, D. and Frei, R. and Plagge, H. and Battegay, M. and Widmer, A. F.. (2010) Stronger correlation between antibiotic use and the incidence of Clostridium difficile determined by culture results instead of faecal toxin detection only. European journal of clinical microbiology & infectious diseases, Vol. 29, H. 12. pp. 1575-1578.

Burger, Bettina and Kind, Fabiola and Spoerri, Iris and Rütten, Arno and Battegay, Manuel and Häusermann, Peter and Itin, Peter H. and Arnold, Andreas W.. (2010) HIV-positive child with epidermodysplasia verruciformis-like lesions and homozygous mutation in TMC6. AIDS, 24 (17). pp. 2758-2760.

Battegay, Manuel and Bucher, Heiner C.. (2010) Antiretroviral monotherapy : should we abandon the principles of successful antiretroviral therapy? AIDS : official journal of the International AIDS Society, Vol. 24, H. 7. pp. 1057-1059.

Daneschwar, F. and Tschudin Sutter, S. and Widmer, A. F. and Battegay, M.. (2010) 42-jähriger, adipöser Patient mit beatmungspflichtiger H1N1-Infektion. Internist, 51 (10). pp. 1308-1310;1312.

Kouyos, R. D. and von Wyl, V. and Yerly, S. and Boni, J. and Rieder, P. and Joos, B. and Taffe, P. and Shah, C. and Burgisser, P. and Klimkait, T. and Weber, R. and Hirschel, B. and Cavassini, M. and Rauch, A. and Battegay, M. and Vernazza, P. L. and Bernasconi, E. and Ledergerber, B. and Bonhoeffer, S. and Gunthard, H. F. and Swiss HIV Cohort Study, . (2010) Ambiguity in population-based sequencing of HIV-1 as a marker for the age of HIV infection. Antiviral therapy, Vol. 15 , A158-A158.

Mertz, Dominik and Koller, Michael and Haller, Patricia and Lampert, Markus L. and Plagge, Herbert and Hug, Balthasar and Koch, Gian and Battegay, Manuel and Flückiger, Ursula and Bassetti, Stefano. (2009) Outcomes of early switching from intravenous to oral antibiotics on medical wards. The Journal of antimicrobial chemotherapy, 64 (1). pp. 188-199.

Mertz, Dominik and Battegay, Manuel and Marzolini, Catia and Mayr, Michael. (2009) Drug-drug interaction in a kidney transplant recipient receiving HIV salvage therapy and tacrolimus. American journal of kidney diseases : the official journal of the National Kidney Foundation, Vol. 54 , e1-4.

Buehlmann, Manuela and Beltraminelli, Helmut and Strub, Christoph and Bircher, Andreas and Jordan, Xavier and Battegay, Manuel and Itin, Peter and Widmer, Andreas F.. (2009) Scabies outbreak in an intensive care unit with 1,659 exposed individuals--key factors for controlling the outbreak. Infection Control and Hospital Epidemiology, 30 (4). pp. 354-360.

Ballif, Marie and Ledergerber, Bruno and Battegay, Manuel and Cavassini, Matthias and Bernasconi, Enos and Schmid, Patrick and Hirschel, Bernard and Furrer, Hansjakob and Rickenbach, Martin and Opravil, Milos and Weber, Rainer. (2009) Impact of previous virological treatment failures and adherence on the outcome of antiretroviral therapy in 2007. PLoS ONE, Vol. 4 , e8275.

Young, Jim and Bucher, Heiner C. and Guenthard, Huldrych F. and Rickenbach, Martin and Fux, Christoph A. and Hirschel, Bernard and Cavassini, Matthias and Vernazza, Pietro and Bernasconi, Enos and Battegay, Manuel. (2009) Virological and immunological responses to efavirenz or boosted lopinavir as first-line therapy for patients with HIV. Antiviral therapy : an official publication of the International Society for Antiviral Research, Vol. 14. pp. 771-779.

Ehrhard, Simone and Wernli, Marion and Dürmüller, Ursula and Battegay, Manuel and Gudat, Fred and Erb, Peter. (2009) Influence of antiretroviral therapy on programmed death-1 (CD279) expression on T cells in lymph nodes of human immunodeficiency virus-infected individuals. Human pathology : a clinicopathologic quarterly, Vol. 40. pp. 1427-1433.

Battegay, Manuel and Elzi, Luigia. (2009) Morbidity and mortality in HIV-infected individuals - a shift towards comorbidities. Swiss medical weekly : official journal of the Swiss Society of Infectious Diseases, the Swiss Society of Internal Medicine, the Swiss Society of Pneumology, Vol. 139. pp. 564-570.

Calmy, Alexandra and Vallier, Nathalie and Nguyen, Alain and Lange, Joep Ma and Battegay, Manuel and de Wolf, Frank and Reiss, Peter and Lima, Viviane D. and Hirschel, Bernard and Hogg, Robert S. and Yip, Benita and Montaner, Julio S. G. and Wit, Ferdinand W.. (2009) Safety and efficacy of once-daily nevirapine dosing : a multicohort study. Antiviral therapy : an official publication of the International Society for Antiviral Research, Vol. 14. pp. 931-938.

Itin, Peter H. and Hengge, Ulrich R. and Battegay, Manuel. (2009) [The skin, an interdisciplinary organ]. Der Internist, 50 (2). pp. 135-136.

Orasch, C. and Battegay, M.. (2009) [53 year-old patient with fever and cough]. Der Internist : Organ des Berufsverbandes Deutscher Internisten, Vol. 50. pp. 877-880.

May, Margaret and Wood, Robin and Myer, Landon and Taffé, Patrick and Rauch, Andri and Battegay, Manuel and Egger, Matthias. (2009) CD4(+) T cell count decreases by ethnicity among untreated patients with HIV infection in South Africa and Switzerland. Journal of infectious diseases, Vol. 200. pp. 1729-1735.

Rotger, Margalida and Bayard, Cornelia and Taffé, Patrick and Martinez, Raquel and Cavassini, Matthias and Bernasconi, Enos and Battegay, Manuel and Hirschel, Bernard and Furrer, Hansjakob and Witteck, Andrea and Weber, Rainer and Ledergerber, Bruno and Telenti, Amalio and Tarr, Philip E.. (2009) Contribution of genome-wide significant single-nucleotide polymorphisms and antiretroviral therapy to dyslipidemia in HIV-infected individuals : a longitudinal study. Circulation. Cardiovascular genetics : journal of the American Heart Association, Vol. 2. pp. 621-628.

Combescure, Christophe and Vallier, N. and Ledergerber, B. and Cavassini, M. and Furrer, H. and Rauch, A. and Battegay, M. and Bernasconi, E. and Vernazza, P. and Hirschel, B.. (2009) How reliable is an undetectable viral load? HIV medicine : the official journal of the British HIV Association (BHIVA) and the European AIDS Clinical Society (EACS), Vol. 10. pp. 470-476.

Bellini, C. and Keiser, O. and Chave, J. P. and Evison, J. and Fehr, J. and Kaiser, L. and Weber, R. and Vernazza, P. and Bernasconi, E. and Telenti, A. and Cavassini, M. and Swiss, HIV Cohort Study. (2009) Liver enzyme elevation after lamivudine withdrawal in HIV-hepatitis B virus co-infected patients : the Swiss HIV cohort study. HIV medicine : the official journal of the British HIV Association (BHIVA) and the European AIDS Clinical Society (EACS), Vol. 10. pp. 12-18.

Observational, H. I. V. and Epidemiological, Research and Europe, and Study, Group. (2009) Incidence and risk factors of HIV-related non-Hodgkin's lymphoma in the era of combination antiretroviral therapy. Antiviral therapy : an official publication of the International Society for Antiviral Research, Vol. 14. pp. 1065-1074.

Elzi, Luigia and Kaufmann, Gilbert and Weber, Rainer and Fux, Christoph A. and Cavassini, Matthias and Hirschel, Bernard and Vernazza, Pietro and Bernasconi, Enos and Battegay, Manuel and Swiss HIV Cohort Study, . (2009) Discontinuation of enfuvirtide in heavily pretreated HIV-infected individuals. HIV clinical trials : an international journal for clinical research in HIV, AIDS therapeutics, Vol. 10. pp. 207-214.

Mertz, Dominik and Frei, Reno and Periat, Nadine and Zimmerli, Melanie and Battegay, Manuel and Flückiger, Ursula and Widmer, Andreas F.. (2009) Exclusive Staphylococcus aureus throat carriage : at-risk populations. Archives of internal medicine, Vol. 169. pp. 172-178.

Blaettler, L. and Mertz, D. and Frei, R. and Elzi, L. and Widmer, A. F. and Battegay, M. and Flückiger, U.. (2009) Secular trend and risk factors for antimicrobial resistance in Escherichia coli isolates in Switzerland 1997-2007. Infection, 37. pp. 534-539.

Khanna, Nina and Wolbers, Marcel and Mueller, Nicolas J. and Garzoni, Christian and Du Pasquier, Renaud A. and Fux, Christoph A. and Vernazza, Pietro and Bernasconi, Enos and Viscidi, Raphael and Battegay, Manuel and Hirsch, Hans H.. (2009) JC virus-specific immune responses in human immunodeficiency virus type 1 patients with progressive multifocal leukoencephalopathy. Journal of virology, Vol. 83. pp. 4404-4411.

Conen, Anna and Fehr, Jan and Glass, Tracy R. and Furrer, Hansjakob and Weber, Rainer and Vernazza, Pietro and Hirschel, Bernard and Cavassini, Matthias and Bernasconi, Enos and Bucher, Heiner C. and Battegay, Manuel. (2009) Self-reported alcohol consumption and its association with adherence and outcome of antiretroviral therapy in the Swiss HIV Cohort Study. Antiviral therapy : an official publication of the International Society for Antiviral Research, Vol. 14. pp. 349-357.

Young, Jim and Glass, Tracy R. and Bernasconi, Enos and Rickenbach, Martin and Furrer, Hansjakob and Hirschel, Bernard and Tarr, Philip E. and Vernazza, Pietro and Battegay, Manuel and Bucher, Heiner C.. (2009) Hierarchical modeling gave plausible estimates of associations between metabolic syndrome and components of antiretroviral therapy. Journal of clinical epidemiology, Vol. 62. pp. 632-641.

Clifford, Gary M. and Rickenbach, Martin and Lise, Mauro and Dal Maso, Luigino and Battegay, Manuel and Bohlius, Julia and Boffi El Amari, Emmanuelle and Karrer, Urs and Jundt, Gernot and Bordoni, Andrea and Ess, Silvia and Franceschi, Silvia. (2009) Hodgkin lymphoma in the Swiss HIV Cohort Study. Blood : the journal of the American Society of Hematology, Vol. 113. pp. 5737-5742.

Khanna, Nina and Elzi, Luigia and Mueller, Nicolas J. and Garzoni, Christian and Cavassini, Matthias and Fux, Christoph A. and Vernazza, Pietro and Bernasconi, Enos and Battegay, Manuel and Hirsch, Hans H.. (2009) Incidence and outcome of progressive multifocal leukoencephalopathy over 20 years of the Swiss HIV Cohort Study. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, Vol. 48. pp. 1459-1466.

von Wyl, Viktor and Yerly, Sabine and Bürgisser, Philippe and Klimkait, Thomas and Battegay, Manuel and Bernasconi, Enos and Cavassini, Matthias and Furrer, Hansjakob and Hirschel, Bernard and Vernazza, Pietro L. and Francioli, Patrick and Bonhoeffer, Sebastian and Ledergerber, Bruno and Günthard Huldrych, F. and Swiss HIV Cohort Study, . (2009) Long-term trends of HIV type 1 drug resistance prevalence among antiretroviral treatment-experienced patients in Switzerland. Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, Vol. 48. pp. 979-987.

Mocroft, A. and Wyatt, C. and Szczech, L. and Neuhaus, J. and El-Sadr, W. and Tracy, R. and Kuller, L. and Shlipak, M. and Angus, B. and Klinker, H. and Ross, M. and Insight, Smart Study Group. (2009) Interruption of antiretroviral therapy is associated with increased plasma cystatin C. AIDS : official journal of the International AIDS Society, Vol. 23. pp. 71-82.

Itin, P. H. and Battegay, M.. (2009) [Mucocutaneous infections in immunosuppression]. Der Internist, 50 (2). pp. 150-159.

Mertz, Dominik and Viktorin, Nina and Wolbers, Marcel and Flückiger, Ursula and Battegay, Manuel. (2009) Impact of HIV status on outcome of infectious complications in intravenous drug users. JAIDS: journal of acquired immune deficiency syndromes, Vol. 51, H. 4 , S. 506-507 ; author reply 507-508.

Conen, Anna and Zimmerer, Stefan and Frei, Reno and Battegay, Manuel and Elzi, Luigia and Trampuz, Andrej. (2009) A pain in the neck: probiotics for ulcerative colitis. Annals of internal medicine, Vol. 151, H. 12. pp. 895-897.

Ehrhard, S. and Wernli, M. and Kaufmann, G. and Pantaleo, G. and Rizzardi, G. P. and Gudat, F. and Erb, P. and Battegay, M.. (2008) Effect of antiretroviral therapy on apoptosis markers and morphology in peripheral lymph nodes of HIV-infected individuals. Infection, 36 (2). pp. 120-129.

Khanlari, B. and Bodmer, M. and Terracciano, L. and Heim, M. H. and Fluckiger, U. and Weisser, M.. (2008) Hepatitis with fibrin-ring granulomas. Infection, 36 (4). pp. 381-383.

Hogg, R. and Lima, V. and Sterne, J. A. and Grabar, S. and Battegay, M. and Bonarek, M. and D'Arminio Monforte, A. and Esteve, A. and Gill, M. J. and Harris, R. and Justice, A. and Hayden, A. and Lampe, F. and Mocroft, A. and Mugavero, M. J. and Staszewski, S. and Wasmuth, J. C. and van Sighem, A. and Kitahata, M. and Guest, J. and Egger, M. and May, M.. (2008) Antiretroviral therapy cohort collaboration : life expectancy of individuals on combination antiretroviral therapy in high-income countries: a collaborative analysis of 14 cohort studies. Lancet, Vol. 372. pp. 293-299.

Khanna, N. and Opravil, M. and Furrer, H. and Cavassini, M. and Vernazza, P. and Bernasconi, E. and Weber, R. and Hirschel, B. and Battegay, M. and Kaufmann, G. R. and Swiss, HIV Cohort Study. (2008) CD4+ T cell count recovery in HIV type 1-infected patients is independent of class of antiretroviral therapy. Clin Infect Dis, Vol. 47. pp. 1093-1101.

Conen, A. and Walti, L. N. and Merlo, A. and Fluckiger, U. and Battegay, M. and Trampuz, A.. (2008) Characteristics and treatment outcome of cerebrospinal fluid shunt-associated infections in adults: a retrospective analysis over an 11-year period. Clinical infectious diseases, Vol. 47. pp. 73-82.

von Wyl, V. and Yerly, S. and Böni, J. and Bürgisser, P. and Klimkait, T. and Battegay, M. and Bernasconi, E. and Cavassini, M. and Furrer, H. and Hirschel, B. and Vernazza, P. L. and Rickenbach, M. and Ledergerber, B. and Günthard, H. F. and Swiss, HIV Cohort Study. (2008) Factors associated with the emergence of K65R in patients with HIV-1 infection treated with combination antiretroviral therapy containing tenofovir. Clinical infectious diseases, Vol. 46. pp. 1299-1309.

Rauch, A. and Nolan, D. and Furrer, H. and McKinnon, E. and John, M. and Mallal, S. and Gaudieri, S. and Günthard, H. F. and Schmid, P. and Battegay, M. and Hirschel, B. and Telenti, A. and James, I. and Swiss, HIV Cohort Study. (2008) HLA-Bw4 homozygosity is associated with an impaired CD4 T cell recovery after initiation of antiretroviral therapy. Clinical infectious diseases, Vol. 46. pp. 1921-1925.

Glass, T. R. and De Geest, S. and Hirschel, B. and Battegay, M. and Furrer, H. and Covassini, M. and Vernazza, P. L. and Bernasconi, E. and Rickenboch, M. and Weber, R. and Bucher, H. C. and Swiss, HIV Cohort Study. (2008) Self-reported non-adherence to antiretroviral therapy repeatedly assessed by two questions predicts treatment failure in virologically suppressed patients. Antiviral therapy, Vol. 13. pp. 77-85.

Mertz, D. and Khanlari, B. and Viktorin, N. and Battegay, M. and Fluckiger, U.. (2008) Less than 28 days of intravenous antibiotic treatment is sufficient for suppurative thrombophlebitis in injection drug users. Clinical infectious diseases, Vol. 46. pp. 741-744.

Sabin, C. A. and Smith, C. J. and d Arminio Monforte, A. and Battegay, M. and Gabiano, C. and Galli, L. and Geelen, S. and Gibb, D. and Guiguet, M. and Judd, A. and Leport, C. and Lewden, C. and Pantazis, N. and Porter, K. and Raffi, F. and Thorne, C. and Torti, C. and Walker, S. and Warszawski, J. and Wintergerst, U.. (2008) Collaboration of Observational HIV Epidemiological Research Europe (COHERE) Study Group : Response to combination antiretroviral therapy: variation by age. AIDS, Vol. 22. pp. 1463-1473.

Polesel, J. and Clifford, G. M. and Rickenbach, M. and Dal Maso, L. and Battegay, M. and Bouchardy, C. and Furrer, H. and Hasse, B. and Levi, F. and Probst-Hensch, N. M. and Schmid, P. and Franceschi, S. and Swiss, HIV Cohort Study. (2008) Non-Hodgkin lymphoma incidence in the Swiss HIV Cohort Study before and after highly active antiretroviral therapy. AIDS, Vol. 22. pp. 301-306.

Gruber, V. and Cavassini, M. and Battegay, M. and Boffi El Amari, E. and Tarr, P. E.. (2008) Exposition gegenüber HIV, Hepatitis B und C in Praxis und Spital : Vorbeugung und Post-Expositionsprophylaxe. Swiss medical forum = Schweizerisches Medizin-Forum, Vol. 8. pp. 650-655.

Vo, T. T. and Ledergerber, B. and Keiser, O. and Hirschel, B. and Furrer, H. and Battegay, M. and Cavassini, M. and Bernasconi, E. and Vernazza, P. and Weber, R. and Swiss, HIV Cohort Study. (2008) Durability and outcome of initial antiretroviral treatments received during 2000--2005 by patients in the Swiss HIV Cohort Study. Journal of infectious diseases, Vol. 197, no. 12. pp. 1685-1694.

Lundgren, J. D. and Battegay, M. and Behrens, G. and De Wit, S. and Guaraldi, G. and Katlama, C. and Martinez, E. and Nair, D. and Powderly, W. G. and Reiss, P. and Sutinen, J. and Vigano, A. and Eacs, Executive Committee. (2008) European AIDS Clinical Society (EACS) guidelines on the prevention and management of metabolic diseases in HIV. HIV medicine, Vol. 9. pp. 72-81.

Wolbers, M. and Bucher, H. C. and Furrer, H. and Rickenbach, M. and Cavassini, M. and Weber, R. and Schmid, P. and Bernasconi, E. and Hirschel, B. and Battegay, M. and Swiss, HIV Cohort Study. (2008) Delayed diagnosis of HIV infection and late initiation of antiretroviral therapy in the Swiss HIV Cohort Study. HIV medicine, Vol. 9. pp. 397-405.

Louvel, S. and Battegay, M. and Vernazza, P. and Bregenzer, T. and Klimkait, T. and Hamy, F. and Swiss, HIV Cohort Study. (2008) Detection of drug-resistant HIV minorities in clinical specimens and therapy failure. HIV medicine, Vol. 9. pp. 133-141.

Nguyen, A. and Calmy, A. and Schiffer, V. and Bernasconi, E. and Battegay, M. and Opravil, M. and Evison, J. M. and Tarr, P. E. and Schmid, P. and Perneger, T. and Hirschel, B. and Swiss, HIV Cohort Study. (2008) Lipodystrophy and weight changes : data from the Swiss HIV Cohort Study, 2000-2006. HIV medicine, Vol. 9. pp. 142-150.

Ciuffreda, D. and Comte, D. and Cavassini, M. and Giostra, E. and Bühler, L. and Perruchoud, M. and Heim, M. H. and Battegay, M. and Genné, D. and Mulhaupt, B. and Malinverni, R. and Oneta, C. and Bernasconi, E. and Monnat, M. and Cerny, A. and Chuard, C. and Borovicka, J. and Mentha, G. and Pascual, M. and Gonvers, J. J. and Pantaleo, G. and Dutoit, V.. (2008) Polyfunctional HCV-specific T-cell responses are associated with effective control of HCV replication. European Journal of Immunology, Vol. 38, H. 10. pp. 2665-2677.

Mertz, D. and Viktorin, N. and Wolbers, M. and Laifer, G. and Leimenstoll, B. and Fluckiger, U. and Battegay, M.. (2008) Appropriateness of antibiotic treatment in intravenous drug users, a retrospective analysis. BMC infectious diseases, Vol. 8 , 42.

Steinhuber, A. and Landmann, R. and Goerke, C. and Wolz, C. and Flückiger, U.. (2008) Bioluminescence imaging to study the promoter activity of hla of Staphylococcus aureus in vitro and in vivo. Zentralblatt für Bakteriologie, Vol. 298, H. 7/8. pp. 599-605.

Battegay, M. and Stoeckle, M. and Tanner, M. and Hatz, C.. (2008) Wo HIV-Betreuung in Afrika wirkt. Gazzetta des Universitätsspitals Basel, 2008, Nr. 1. pp. 4-5.

Battegay, M.. (2008) [Commentary on the STROBE statement. A checklist for observational studies improves transparency]. Der Internist, Vol. 49, no. 6. p. 694.

Battegay, M. and Hirschel, B.. (2008) 11th European AIDS Conference (EACS) - Conference Scene. Future HIV Therapy, Vol. 2, no. 1. pp. 21-24.

Tschudin, S. and Steimann, S. and Bitzer, J. and Hösli, I. and Holzgreve, W. and Elzi, L. and Klimkait, T. and Rudin, C. and Battegay, M. and De Geyter, C.. (2008) Round-table multidisciplinary counselling of couples with HIV prior to assisted reproduction. Reproductive biomedicine online, Vol. 17, H. 2. pp. 167-174.

Conen, A. and Weisser, M. and Jörg, C. O. and Battegay, M. and Trampuz, A. and Frei, R. and Christen, S. and Heim, D. and Gratwohl, A. and Flückiger, U.. (2008) Candida krusei--a serious complication in patients with hematological malignancies : successful treatment with caspofungin. Transplant infectious disease, Vol. 10, H. 1. pp. 66-70.

Battegay, M. and Riemann, J. F.. (2008) Evidenzbasierte Medizin. Der Internist, Vol. 49. pp. 653-654.

Battegay, M. and Fehr, J. and Flückiger, U. and Elzi, L.. (2008) Antiretroviral therapy of late presenters with advanced HIV disease. Journal of antimicrobial chemotherapy, Vol. 62, H. 1. pp. 41-44.

Berger, Simona and Schad, Tanja and von Wyl, Viktor and Ehlert, Ulrike and Zellweger, Claudine and Furrer, Hansjakob and Regli, Daniel and Vernazza, Pietro and Ledergerber, Bruno and Battegay, Manuel and Weber, Rainer and Gaab, Jens. (2008) Effects of cognitive behavioral stress management on HIV-1 RNA, CD4 cell counts and psychosocial parameters of HIV-infected persons. AIDS, 22 (6). pp. 767-775.

Khanna, N. and Goldenberger, D. and Graber, P. and Battegay, M. and Widmer, A. F.. (2003) Gastroenteritis outbreak with norovirus in a Swiss university hospital with a newly identified virus strain. The journal of hospital infection, Vol. 55, H. 2. pp. 131-136.