Items where contributor is "Ebert, Dieter"

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Duneau, David and Ebert, Dieter and Du Pasquier, Louis. (2016) Infections by Pasteuria do not protect its natural host Daphnia magna from subsequent infections. Developmental and comparative immunology, 57. pp. 120-125.

Mushegian, Alexandra A. and Ebert, Dieter. (2016) Rethinking "mutualism" in diverse host-symbiont communities. Bioessays, 38 (1). pp. 100-108.


Lange, Benjamin and Kaufmann, Andrea Patricia and Ebert, Dieter. (2015) Genetic, ecological and geographic covariables explaining host range and specificity of a microsporidian parasite. The journal of animal ecology, 84 (6). pp. 1711-1719.

Roulin, Anne C. and Mariadassou, Mahendra and Hall, Matthew D. and Walser, Jean-Claude and Haag, Christoph and Ebert, Dieter. (2015) High genetic variation in resting-stage production in a metapopulation: Is there evidence for local adaptation? Evolution, 69 (10). pp. 2747-2756.

Mariadassou, Mahendra and Pichon, Samuel and Ebert, Dieter. (2015) Microbial ecosystems are dominated by specialist taxa. Ecology letters, 18 (9). pp. 974-982.

Fields, Peter D. and Reisser, Céline and Dukić, Marinela and Haag, Christoph R. and Ebert, Dieter. (2015) Genes mirror geography in Daphnia magna. Molecular ecology, 24 (17). pp. 4521-4536.

Rabajante, Jomar F. and Tubay, Jerrold M. and Uehara, Takashi and Morita, Satoru and Ebert, Dieter and Yoshimura, Jin. (2015) Red Queen dynamics in multi-host and multi-parasite interaction system. Scientific reports, 5. p. 10004.

Clerc, Melanie and Ebert, Dieter and Hall, Matthew D.. (2015) Expression of parasite genetic variation changes over the course of infection: implications of within-host dynamics for the evolution of virulence. Proceedings of the Royal Society. Series B, Biological sciences, 282 (1804). p. 20142820.

Sison-Mangus, M. P. and Mushegian, A. A. and Ebert, D.. (2015) Water fleas require microbiota for survival, growth and reproduction. ISME journal, Vol. 9, H. 1 , S. 59–67.

Routtu, J. and Ebert, D.. (2015) Genetic architecture of resistance in Daphnia hosts against two species of host-specific parasites. Heredity, Vol. 114 , S. 241–248.

Pombert, Jean-François and Haag, Karen Luisa and Beidas, Shadi and Ebert, Dieter and Keeling, Patrick J.. (2015) The Ordospora colligata genome: Evolution of extreme reduction in microsporidia and host-to-parasite horizontal gene transfer. mBio, 6 (1). e02400-14.


Luijckx, P. and Duneau, D. and Andras, J. P. and Ebert, D.. (2014) Cross-species infection trials reveal cryptic parasite varieties and a putative polymorphism shared among host species. Evolution, Vol. 68 , no. 2, S. 577–586. S. 1-10.

Yampolsky, Lev Y. and Schaer, Tobias M. M. and Ebert, Dieter. (2014) Adaptive phenotypic plasticity and local adaptation for temperature tolerance in freshwater zooplankton. Proceedings of the Royal Society. Series B, Biological sciences, Vol. 281, H. 1776 , 20132744.

Chipman, Ariel D. and Ferrier, David E. K. and Brena, Carlo and Qu, Jiaxin and Hughes, Daniel S. T. and Schröder, Reinhard and Torres-Oliva, Montserrat and Znassi, Nadia and Jiang, Huaiyang and Almeida, Francisca C. and Alonso, Claudio R. and Apostolou, Zivkos and Aqrawi, Peshtewani and Arthur, Wallace and Barna, Jennifer C. J. and Blankenburg, Kerstin P. and Brites, Daniela and Capella-Gutiérrez, Salvador and Coyle, Marcus and Dearden, Peter K. and Du Pasquier, Louis and Duncan, Elizabeth J. and Ebert, Dieter and Eibner, Cornelius and Erikson, Galina and Evans, Peter D. and Extavour, Cassandra G. and Francisco, Liezl and Gabaldón, Toni and Gillis, William J. and Goodwin-Horn, Elizabeth A. and Green, Jack E. and Griffiths-Jones, Sam and Grimmelikhuijzen, Cornelis J. P. and Gubbala, Sai and Guigó, Roderic and Han, Yi and Hauser, Frank and Havlak, Paul and Hayden, Luke and Helbing, Sophie and Holder, Michael and Hui, Jerome H. L. and Hunn, Julia P. and Hunnekuhl, Vera S. and Jackson, LaRonda and Javaid, Mehwish and Jhangiani, Shalini N. and Jiggins, Francis M. and Jones, Tamsin E. and Kaiser, Tobias S. and Kalra, Divya and Kenny, Nathan J. and Korchina, Viktoriya and Kovar, Christie L. and Kraus, F. Bernhard and Lapraz, François and Lee, Sandra L. and Lv, Jie and Mandapat, Christigale and Manning, Gerard and Mariotti, Marco and Mata, Robert and Mathew, Tittu and Neumann, Tobias and Newsham, Irene and Ngo, Dinh N. and Ninova, Maria and Okwuonu, Geoffrey and Ongeri, Fiona and Palmer, William J. and Patil, Shobha and Patraquim, Pedro and Pham, Christopher and Pu, Ling-Ling and Putman, Nicholas H. and Rabouille, Catherine and Ramos, Olivia Mendivil and Rhodes, Adelaide C. and Robertson, Helen E. and Robertson, Hugh M. and Ronshaugen, Matthew and Rozas, Julio and Saada, Nehad and Sánchez-Gracia, Alejandro and Scherer, Steven E. and Schurko, Andrew M. and Siggens, Kenneth W. and Simmons, DeNard and Stief, Anna and Stolle, Eckart and Telford, Maximilian J. and Tessmar-Raible, Kristin and Thornton, Rebecca and van der Zee, Maurijn and von Haeseler, Arndt and Williams, James M. and Willis, Judith H. and Wu, Yuanqing and Zou, Xiaoyan and Lawson, Daniel and Muzny, Donna M. and Worley, Kim C. and Gibbs, Richard A. and Akam, Michael and Richards, Stephen. (2014) The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede strigamia maritima. PLoS biology, 12 (11). e1002005.

Routtu, J. and Hall, M. D. and Albere, B. and Beisel, C. and Bergeron, R. D. and Chaturvedi, A. and Choi, J. H. and Colbourne, J. and De Meester, L. and Stephens, M. T. and Stelzer, C. P. and Solorzano, E. and Thomas, W. K. and Pfrender, M. E. and Ebert, D.. (2014) An SNP-based second-generation genetic map of Daphnia magna and its application to QTL analysis of phenotypic traits. BMC genomics, Vol. 15 , 1033.

Lange, B. and Reuter, M. and Ebert, D. and Muylaert, K. and Decaestecker, E.. (2014) Diet quality determines interspecific parasite interactions in host populations. Ecology and evolution, Vol. 4, H. 15. S. 3093-3102.

Haag, K. L. and James, T. Y. and Pombert, J. F. and Larsson, R. and Schaer, T. M. M. and Refardt, D. and Ebert, D.. (2014) Evolution of a morphological novelty occurred before genome compaction in a lineage of extreme parasites. Proceedings of the National Academy of Sciences of the United States of America, Vol. 111, no. 43. S. 15480-15485.

Sheikh-Jabbari, E. and Hall, M. D. and Ben-Ami, F. and Ebert, D.. (2014) The expression of virulence for a mixed-mode transmitted parasite in a diapausing host. Parasitology, Vol. 141, H. 8. S. 1097-1107.


Hall, Matthew D. and Vettiger, Andrea and Ebert, Dieter. (2013) Interactions between environmental stressors: the influence of salinity on host-parasite interactions between Daphnia magna and Pasteuria ramosa. Oecologia, Vol. 171, H. 4. S. 789-796.

Roulin, Anne C. and Routtu, Jarkko and Hall, Matthew D. and Janicke, Tim and Colson, Isabelle and Haag, Christoph R. and Ebert, Dieter. (2013) Local adaptation of sex induction in a facultative sexual crustacean: insights from QTL mapping and natural populations of Daphnia magna. Molecular ecology, Vol. 22, no. 13. S. 3567-3579.

Haag, Karen L. and Traunecker, Emmanuel and Ebert, Dieter. (2013) Single-nucleotide polymorphisms of two closely related microsporidian parasites suggest a clonal population expansion after the last glaciation. Molecular ecology, Vol. 22, no. 2. S. 314-326.

Schlotz, Nina and Ebert, Dieter and Martin-Creuzburg, Dominik. (2013) Dietary supply with polyunsaturated fatty acids and resulting maternal effects influence host -- parasite interactions. BMC ecology, Vol. 13 , 41.

Brites, D. and Brena, C. and Ebert, D. and Du Pasquier, L.. (2013) More than one way to produce protein diversity: duplication and limited alternative splicing of an adhesion molecule gene in basal arthropods. Evolution : international journal of organic evolution, Vol. 67, no. 10. S. 2999-3011.

Haag, K. L. and Sheikh-Jabbari, E. and Ben-Ami, F. and Ebert, D.. (2013) Microsatellite and single-nucleotide polymorphisms indicate recurrent transitions to asexuality in a microsporidian parasite. Journal of evolutionary biology, Vol. 26, H. 5. S. 1117-1128.

Hall, Matthew D. and Ebert, Dieter. (2013) The genetics of infectious disease susceptibility: has the evidence for epistasis been overestimated? BMC biology, Vol. 11 , Art. 79.

Luijckx, Pepijn and Fienberg, Harris and Duneau, David and Ebert, Dieter. (2013) A matching-allele model explains host resistance to parasites. Current biology, Vol. 23, H. 12. S. 1085-1088.

Andras, J. P. and Ebert, D.. (2013) A novel approach to parasite population genetics: experimental infection reveals geographic differentiation, recombination and host-mediated population structure in Pasteuria ramosa, a bacterial parasite of Daphnia. Molecular ecology, Vol. 22, no. 4. S. 972-986.

Ebert, Dieter. (2013) The epidemiology and evolution of symbionts with mixed-mode Transmission. Annual review of ecology, evolution, and systematics, Vol. 44. S. 623-643.

Ebert, Dieter and Hottinger, Jürgen W. and Pajunen, V. Ilmari. (2013) Unsuitable habitat patches lead to severe underestimation of dynamics and gene flow in a zooplankton metapopulation. The journal of animal ecology, Vol. 82 , S. 759–769.


Kawecki, T. J. and Lenski, R. E. and Ebert, D. and Hollis, B. and Olivieri, I. and Whitlock, M. C.. (2012) Experimental evolution. Trends in ecology & evolution, 27 (10). pp. 547-560.

Luijckx P., Fienberg H. and Duneau D., Ebert D.. (2012) Resistance to a bacterial parasite in the crustacean Daphnia magna shows Mendelian segregation with dominance. Heredity, Vol. 108 , S. 547–551.

Refardt, D. and Ebert, D.. (2012) The impact of infection on host competition and its relationship to parasite persistence in a Daphnia-microparasite system. Evolutionary ecology, Vol. 26. S. 95-107.

Duneau, D. and Ebert, D.. (2012) Host sexual dimorphism and parasite adaptation. PLoS biology, Vol. 10, H. 2 , e1001271.

Mennerat, A. and Hamre, L. and Ebert, D. and Nilsen, F. and Da Vidova, M. and Skorping, A.. (2012) Life history and virulence are linked in the ectoparasitic salmon louse Lepeophtheirus salmonis. Journal of evolutionary biology, Vol. 25, H. 5. S. 856-861.

Hall, M. D. and Ebert, D.. (2012) Disentangling the influence of parasite genotype, host genotype and maternal environment on different stages of bacterial infection in Daphnia magna. Proceedings of the Royal Society. Series B, Biological sciences, Vol. 279. S. 3176-3183.

Duneau, D. and Ebert, D.. (2012) The role of moulting in parasite defense. Proceedings of the Royal Society. Series B, Biological sciences, Vol. 279. S. 3049-3054.

Kawecki, T. J. and Lenski, R. E. and Ebert, D. and Hollis, B. and Olivieri, I. and Whitlock, M. C.. (2012) The value of complementary approaches in evolutionary research: reply to Magalhães and Matos. Trends in ecology & evolution, 27 (12). pp. 650-651.

Le Codiac, Marion and Simon, Marianne and Marchetti, Anna and Ebert, Dieter and Cosson, Pierre. (2012) Daphnia magna, a host to evaluate bacterial virulence. Applied and Environmental Microbiology, 78. pp. 593-595.


Haag, K. L. and Larsson, J. I. R. and Refardt, D. and Ebert, D.. (2011) Cytological and molecular description of Hamiltosporidium tvaerminnensis gen. et sp. nov., a microsporidian parasite of Daphnia magna, and establishment of Hamiltosporidium magnivora comb. nov. Parasitology, Vol. 138, H. 4. S. 447-462.

Luickx, P. and Ben-Ami, F. and Mouton, L. and Du Pasquier, L. and Ebert, D.. (2011) Cloning of the unculturable parasite Pasteuria ramosa and its Daphnia host reveals extreme genotype-genotype interactions. Ecology letters, 14 (2). pp. 125-131.

Lass, S. and Hottinger, J. W. and Fabbro, T. and Ebert, D.. (2011) Converging seasonal prevalence dynamics in experimental epidemics. BMC ecology, Vol. 11 , 14.

Brites, D. and Encinas-Viso, F. and Ebert, D. and Du Pasquier, L. and Haag, C. R.. (2011) Population genetics of duplicated alternatively spliced exons of the dscam gene in Daphnia and Drosophila. PLoS one, Vol. 6, H. 12 , e27947.

Duneau, D. and Luijckx, P. and Ben-Ami, F. and Laforsch, C. and Ebert, D.. (2011) Resolving the infection process reveals striking differences in the contribution of environment, genetics and phylogeny to host-parasite interactions. BMC biology, Vol. 9 , Art. 11.

Ebert, Dieter. (2011) A genome for the environment. Science, 331 (6017). pp. 539-540.

McElroy, Kerensa and Mouton, Laurence and Du Pasquier, Louis and Qi, Weihong and Ebert, Dieter . (2011) Characterisation of a large family of polymorphic collagen-like proteins in the endospore-forming bacterium Pasteuria ramosa. Research in Microbiology, 162 (7). pp. 701-714.

Ben-Ami, F. and Rigaud, T. and Ebert, D.. (2011) The expression of virulence during double infections by different parasites with conflicting host exploitation and transmission strategies. Journal of Evolutionary Biology, 24 (6). pp. 1307-1316.


Ben-Ami, F. and Ebert, D. and Regoes, R.. (2010) Pathogen dose infectivity curves as a method to analyze the distribution of host susceptibility : a quantitative assessment of maternal effects after food stress and pathogen exposure. The American naturalist, Vol. 175. S. 106-115.

Mennerat, A. and Nilsen, F. and Ebert, D. and Skorping, A.. (2010) Intensive farming: bevolutionary implications for parasites and pathogens. Evolutionary biology, Vol. 37, H. 2/3. S. 59-67.

Keeling, P. J. and Corradi, N. and Morrison, H. G. and Haag, K. L. and Ebert, D. and Weiss, L. M. and Akiyoshi, D. E. and Tzipori, S.. (2010) The reduced genome of the parasitic Microsporidian Enterocytozoon bieneusi lacks genes for core carbon metabolism. Genome biology and evolution, Vol. 2. S. 304-309.

Frost, P. C. and Ebert, D. and Larson, J. H. and Marcus, M. A. and Wagner, N. D. and Zalewski, A.. (2010) Transgenerational effects of poor elemental food quality on an aquatic invertebrate. Oecologia, Vol. 1. S. 865-872.

Pulkkinen, K. and Suomalainen L. -R., and Read, A. F. and Ebert, D. and Rintamäki, P. and Valtonen, E. T.. (2010) Intensive fish farming and the evolution of pathogen virulence : the case of columnaris disease in Finland. Proceedings of the Royal Society. Series B, Biological sciences, Vol. 2. S. 593-600.

Ganz, H. and Ebert, D.. (2010) Benefits of host genetic diversity for resistance to infection depend on parasite diversity. Ecology, Vol. 91. S. 1263-1268.

Altermatt, F. and Pajunen, V. I. and Ebert, D.. (2010) Populations in small, ephemeral habitat patches may drive dynamics in a Daphnia magna metapopulation. Ecology, Vol. 91, Nr. 10. S. 2975-2982.

Routtu, J. and Jansen, B. and Colson, I. and De Meester, L. and Ebert, D.. (2010) The first-generation Daphnia magna linkage map. BMC genomics, Vol. 11 , 508.


Gaba, S. and Ebert, D.. (2009) Time-shift experiments as a tool to study antagonistic coevolution. Trends in ecology & evolution, Vol. 24, H. 4. S. 226-232.

Altermatt, F. and Pajunen, I. and Ebert, D.. (2009) Desiccation of rock pool habitats and its influence onpopulation persistence in a Daphnia metacommunity. PLoS one, Vol. 4, H. 3 , e4703.

Bieger, A. and Ebert, D.. (2009) Expression of parasite virulence at different host population densities under natural conditions. Oecologia, Vol. 160, H. 2. S. 247-255.

Altermatt, F. and Baumeyer, A. and Ebert, D.. (2009) Experimental evidence for male biased flight-to-light behavior in two moth species. Entomologia experimentalis et applicata, Vol. 130, H. 3. S. 259-265.

Qi, W. and Nong, G. and Preston, J. F. and Ben-Ami, F. and Ebert, D.. (2009) Comparative metagenomics of Daphnia symbionts. BMC Genomics, Vol. 10 , 172.

Corradi, N. and Haag, K. L. and Pombert, J. F. and Ebert, D. and Keeling, P. J.. (2009) Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions. Genome biology, Vol. 10, H. 10 , R106.

Colson, I. and Du Pasquier, L. and Ebert, D.. (2009) Intragenic tandem repeats in Daphnia magna: structure, function and distribution. BMC Research Notes, Vol. 2 , 206, 6 S..

Mouton, L. and Traunecker, E. and McElroy, K. and Du Pasquier, L. and Ebert, D.. (2009) Identification of a polymorphic collagen-like protein in the crustacean bacteria Pasteuria ramosa. Research in microbiology, Vol. 160. S. 792-799.


Ben-Ami, F. and Mouton, L. and Ebert, D.. (2008) The effects of multiple infections on the expression and evolution of virulence in a Daphnia-endoparasite system. Evolution, Vol. 62, no. 7. S. 1700-1711.

Schmidt, L. M. and Mouton, L. and Nong, G. and Ebert, D. and Preston, J. F.. (2008) Genetic and immunological comparison of the cladoceran parasite Pasteuria ramosa with the nematode parasite Pasteuria penetrans. Applied and Environmental Microbiology, Vol. 74, H. 1. S. 259-264.

Rodrigues, J. L. M. and Duffy, M. A. and Tessier, A. J. and Ebert, D. and Mouton, L. and Schmidt, T. M.. (2008) Phylogenetic characterization and prevalence of Spirobacillus cienkowskii : a red-pigmented, spiral-shaped bacterial pathogen of the freshwater Cladoceran, Daphnia. Applied and Environmental Microbiology, Vol. 74, H. 5. S. 1575-1582.

Zbinden, M. and Haag, C. R. and Ebert, D.. (2008) Experimental evolution of field populations of Daphnia magna in response to parasite treatment. Journal of evolutionary biology, Vol. 21, H. 4. S. 1068-1078.

Mouton, L. and Ebert, D.. (2008) Variable-number-of-tandem-repeats analysis of genetic diversity in Pasteuria ramosa. Current Microbiology, Vol. 56, H. 5. S. 447-452.

Altermatt, F. and Ebert, D.. (2008) Genetic diversity of Daphnia magna populations enhances resistance to parasites. Ecology letters, Vol. 11. S. 918-928.

Altermatt, F. and Ebert, D.. (2008) The influence of pool volume and summer desiccation on the production of the resting and dispersal stage in a Daphnia metapopulation. Oecologia, Vol. 157, H. 3. S. 441-452.

Roth, O. and Ebert, D. and Vizoso, D. B. and Bieger, A. and Lass, S.. (2008) Male-biased sex-ratio distortion caused by Octosporea bayeri, a vertically and horizontally-transmitted parasite of Daphnia magna. International journal for parasitology, Vol. 38, H. 8/9. S. 969-979.

Frost, P. C. and Ebert, D. and Smith, V. H.. (2008) Bacterial infection changes the elemental composition of Daphnia magna. The journal of animal ecology, Vol. 77, H. 6. S. 1265-1272.

Frost, P. C. and Ebert, D. and Smith, V. H.. (2008) Responses of a bacterial pathogen to phosphorus limitation of its aquatic invertebrate host. Ecology, 89, Nr. 2. S. 313-318.

Brites, D. and McTaggart, S. and Morris, K. and Anderson, J. and Thomas, K. and Colson, I. and Fabbro, T. and Little, T. J. and Ebert, D. and Du Pasquier, L.. (2008) The Dscam homologue of the crustacean Daphnia is diversified by alternative splicing like in insects. Molecular biology and evolution, Vol. 25, no. 7. S. 1429-1439.

Altermatt, F. and Pajunen, V. I. and Ebert, D.. (2008) Climate change affects colonization dynamics in a metacommunity of three Daphnia species. Global change biology, Vol. 14. S. 1209-1220.

Ben-Ami, F. and Roland R. Regoes, and Dieter Ebert, . (2008) A quantitative test of the relationship between parasite dose and infection probability across different host-parasite combinations. Proceedings of the Royal Society. Series B, Biological sciences, Vol. 275. S. 853-859.

Bull, J. J. and Ebert, D.. (2008) Invasion thresholds and the evolution of nonequilibrium virulence. Evolutionary Applications, Vol. 1, H. 1. S. 172-182.

Ebert, D.. (2008) Host-parasite coevolution : insights from the Daphnia-parasite model system. Current opinion in microbiology, Vol. 11, H. 3. S. 290-301.


Ebert, D.. (2005) Ecology, epidemiology, and evolution of parasitism in daphnia. Bethesda.


Ebert, D. and Haag, C. and Kirkpatrick, M. and Riek, M. and Hottinger, J. W. and Pajunen, V. I.. (2002) A selective advantage to immigrant genes in a Daphnia metapopulation. Science, 295. S. 485-488.


Ebert, D. and Jacobs, J.. (1991) Differences in life history and aging in two clonal groups of Daphnia cucullata Sars (Crustacea: Cladocera). Hydrobiologia, Vol. 225. S. 245-253.