Items where Author is "Abrahams, J. P."

2019

Blum, T. B. and Abrahams, J. P.. (2019) 6T17: Cryo-EM structure of the wild-type flagellar filament of the Firmicute Kurthia. Worldwide Protein Data Bank. 6T17.

2018

Tinti, G. and Frojdh, E. and Van Genderen, E. and Gruene, T. and Schmitt, B. and De Winter, D. A. M. and Weckhuysen, B. M. and Abrahams, J. P.. (2018) CCDC 1817054: Experimental Crystal Structure Determination. Cambridge Structural Database. p. 1817054.

2016

van Genderen, E. and Clabbers, M. T. B. and Das, P. P. and Stewart, A. and Nederlof, I. and Barentsen, K. C. and Portillo, Q. and Pannu, N. S. and Nicolopoulos, S. and Gruene, T. and Abrahams, J. P.. (2016) Ab initio structure determination of nanocrystals of organic pharmaceutical compounds by electron diffraction at room temperature using a Timepix quantum area direct electron detector. Acta Crystallographica Section A : Foundations and Advances, 72 (2). pp. 236-242.

van Genderen, E. and Li, Y. W. and Nederlof, I. and Abrahams, J. P.. (2016) Lattice filter for processing image data of three-dimensional protein nanocrystals. Acta crystallographica. Section D, Structural biology, 72 (Pt 1). pp. 34-39.

2011

Nicolopoulos, Stavros and Rauch, Edgar and Georgieva, D. and Abrahams, J. P.. (2011) Low resolution electron crystallography challenges in organic and inorganic crystals with transmission electron microscope (TEM). Acta Crystallographica A-Foundation And Advances, 67. C188.

2010

Sikharulidze, I. and Van Gastel, R. and Schramm, S. and Abrahams, J. P. and Poelsema, B. and Trom, R. M. and Van der Molen, S. J.. (2010) Improved Imaging in low Energy Electron Microscopy and Photo Emission Electron Microscopy Using Medipix2 Pixel Detector. In: Astroparticle, Particle and Space Physics, Detectors and Medical Physics Applications. Proceedings of the 11th Conference, Villa Olmo, Como, Italy, 5-9 October 2009. Singapore, pp. 133-139.

2009

De Geus, D. C. and Van Roon, A. M. M. and Thomassen, E. A. J. and Hokke, C. H. and Deelder, A. M. and Abrahams, J. P.. (2009) 2VQ1: Anti Trimeric Lewis X Fab54-5C10-A. Worldwide Protein Data Bank. 2VQ1.

De Geus, D. C. and Thomassen, E. A. J. and Hagedoorn, P. L. and Pannu, N. S. and Abrahams, J. P.. (2009) 2VXH: The Crystal Structure Of Chlorite Dismutase: A Detox Enzyme Producing Molecular Oxygen. Worldwide Protein Data Bank. 2VXH.

van Gastel, R. and Sikharulidze, I. and Schramm, S. and Abrahams, J. P. and Poelsema, B. and Tromp, R. M. and van der Molen, S. J.. (2009) Medipix 2 detector applied to low energy electron microscopy. Ultramicroscopy, 110 (1). pp. 33-35.

2008

Jiang, L. and Abrahams, J. P.. (2008) 3BBU: The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex. Worldwide Protein Data Bank. 3BBU.

Jiang, L. and Abrahams, J. P.. (2008) 3BBV: The tRNA(phe) fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex. Worldwide Protein Data Bank. 3BBV.

Jiang, L. and Abrahams, J. P.. (2008) 3BBX: The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex. Worldwide Protein Data Bank. 3BBX.

Meulenbroek, E. M. and Paspaleva, K. and Thomassen, E. A. J. and Abrahams, J. P. and Goosen, N. and Pannu, N. S.. (2008) 3BZG: UVDE pH4.4. Worldwide Protein Data Bank. 3BZG.

Meulenbroek, E. M. and Paspaleva, K. and Thomassen, E. A. J. and Abrahams, J. P. and Goosen, N. and Pannu, N. S.. (2008) 3BZJ: Uvde K229l. Worldwide Protein Data Bank. 3BZJ.

Meulenbroek, E. M. and Paspaleva, K. and Thomassen, E. A. J. and Abrahams, J. P. and Goosen, N. and Pannu, N. S.. (2008) 3C0L: Uvde K229r. Worldwide Protein Data Bank. 3C0L.

Meulenbroek, E. M. and Paspaleva, K. and Thomassen, E. A. J. and Abrahams, J. P. and Goosen, N. and Pannu, N. S.. (2008) 3C0Q: Uvde E175a. Worldwide Protein Data Bank. 3C0Q.

Meulenbroek, E. M. and Paspaleva, K. and Thomassen, E. A. J. and Abrahams, J. P. and Goosen, N. and Pannu, N. S.. (2008) 3C0S: UVDE 3 metals. Worldwide Protein Data Bank. 3C0S.

Schaffitzel, C. and Oswald, M. and Berger, I. and Ishikawa, T. and Abrahams, J. P. and Koerten, H. K. and Koning, R. I. and Ban, N.. (2008) EMD-1250.map. Electron Microscopy Data Bank. EMD-1250.map.

Schaffitzel, C. and Oswald, M. and Berger, I. and Ishikawa, T. and Abrahams, J. P. and Koerten, H. K. and Koning, R. I. and Ban, N.. (2008) EMD-1251: Structure of the E. coli signal recognition particle bound to a translating ribosome. Electron Microscopy Data Bank. EMD-1251.

Jiang, L. and Schaffitzel, C. and Bingel-Erlenmeyer, R. and Ban, N. and Korber, P. and Koning, R. I. and Plaisier, J. R. and Abrahams, J. P.. (2008) EMD-1456.map. Electron Microscopy Data Bank. EMD-1456.map.

2006

Schaffitzel, C. and Oswald, M. and Berger, I. and Ishikawa, T. and Abrahams, J. P. and Koerten, H. K. and Koning, R. I. and Ban, N.. (2006) 2IY3: Structure of the E. Coli Signal Regognition Particle. Worldwide Protein Data Bank. 2IY3.

Thomassen, E. A. J. and Dekking, E. H. A. and Thompson, A. and Franken, K. L. and Sanal, Ö. and Abrahams, J. P. and van Tol, M. J. D. and Koning, F.. (2006) The Impact of Single Amino Acid Substitutions in CD3γ on the CD3ϵγ Interaction and T-Cell Receptor–CD3 Complex Formation. Human immunology, 67 (8). pp. 579-588.

2005

Schmauder, R. and van Rijn, R. and Abrahams, J. P. and Kuil, M. E. and Schmidt, T.. (2005) FCS in non-ideal solutions. Biophysical Journal, 88 (1). 655A.

2004

Van Roon, A. M. M. and Pannu, N. S. and De Vrind, J. P. M. and Hokke, C. H. and Deelder, A. M. and Van Der Marel, G. A. and Van Boom, J. H. and Abrahams, J. P.. (2004) 1UZ6: Anti-Lewis X Fab Fragment Uncomplexed. Worldwide Protein Data Bank. 1UZ6.

Van Roon, A. M. M. and Pannu, N. S. and De Vrind, J. P. M. and Hokke, C. H. and Deelder, A. M. and Van Der Marel, G. A. and Van Boom, J. H. and Abrahams, J. P.. (2004) 1UZ8: Anti-Lewis X Fab Fragment In Complex With Lewis X. Worldwide Protein Data Bank. 1UZ8.

Van Roon, A. M. M. and Bink, H. H. J. and Plaisier, J. R. and Pleij, C. W. A. and Abrahams, J. P. and Pannu, N. S.. (2004) 1W39: Crystal Structure Of An Artificial Top Component Of Turnip Yellow Mosaic Virus. Worldwide Protein Data Bank. 1W39.

Leliveld, S. R. and Dame, R. T. and Rohn, J. L. and Noteborn, M. H. M. and Abrahams, J. P.. (2004) Apoptin's functional N- and C-termini independently bind DNA. FEBS Letters, 557 (1-3). pp. 155-158.

Plaisier, J. R. and Koning, R. I. and Koerten, H. K. and van Heel, M. and Abrahams, J. P.. (2004) TYSON: robust searching, sorting, and selecting of single particles in electron micrographs. Journal of Structural Biology, 145 (1-2). pp. 76-83.

2003

Hilge, M. and Siegal, G. and Vuister, G. W. and Guentert, P. and Gloor, S. M. and Abrahams, J. P.. (2003) 1MO7: ATPase. Worldwide Protein Data Bank. 1MO7.

Hilge, M. and Siegal, G. and Vuister, G. W. and Guentert, P. and Gloor, S. M. and Abrahams, J. P.. (2003) 1MO8: ATPase. Worldwide Protein Data Bank. 1MO8.

Plaisier, J. R. and Koning, R. I. and Koerten, H. K. and van Roon, A. M. and Thomassen, E. A. J. and Kuil, M. E. and Hendrix, J. and Broennimann, C. and Pannu, N. S. and Abrahams, J. P.. (2003) Area detectors in structural biology. Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 509 (1-3). pp. 274-282.

van Roon, A. M. M. and Pannu, N. S. and Hokke, C. H. and Deelder, A. M. and Abrahams, J. P.. (2003) Crystallization and preliminary X-ray analysis of an anti-LewisX Fab fragment with and without its LewisX antigen. Acta Crystallographica Section D, 59. pp. 1306-1309.

2002

Hoedemaeker, F. J. and Visschers, R. W. and Alting, A. C. and de Kruif, K. G. and Kuil, M. E. and Abrahams, J. P.. (2002) A novel pH-dependent dimerization motif in beta-lactoglobulin from pig (Sus scrofa). Acta Crystallographica. Section D, Biological Crystallography, 58. pp. 480-486.

Schmauder, R. and Schmidt, T. and Abrahams, J. P. and Kuil, M. E.. (2002) Screening crystallisation conditions using fluorescence correlation spectroscopy. Acta Crystallographica Section D: Structural Biology, 58. pp. 1536-1541.

Bodenstaff, E. R. and Hoedemaeker, F. J. and Kuil, M. E. and de Vrind, H. P. M. and Abrahams, J. P.. (2002) The prospects of protein nanocrystallography. Acta Crystallographica. Section D, Biological Crystallography, 58. pp. 1901-1906.

2001

de Graaff, R. A. G. and Hilge, M. and van der Plas, J. L. and Abrahams, J. P.. (2001) Matrix methods for solving protein substructures of chlorine and sulfur from anomalous data. Acta Crystallographica. Section D, Biological Crystallography, 57. pp. 1857-1862.

Hilge, M. and Perrakis, A. and Abrahams, J. P. and Winterhalter, K. and Piontek, K. and Gloor, S. M.. (2001) Structure elucidation of beta-mannanase: from the electron-density map to the DNA sequence. Acta Crystallographica. Section D, Biological Crystallography, 57. pp. 37-43.

2000

Abrahams, J. P. and Hoedemaeker, F. J.. (2000) 1EXS: Structure Of Porcine Beta-Lactoglobulin. Worldwide Protein Data Bank. 1EXS.

1999

Jin, L. and Abrahams, J. P. and Skinner, R. and Petitou, M. and Pike, R. N. and Carrell, R. W.. (1999) 1AZX: Antithrombin/Pentasaccharide Complex. Worldwide Protein Data Bank. 1AZX.

Pei, X. Y. and Skinner, R. and Abrahams, J. P. and Carrell, R. W.. (1999) 2.6A Structure Of Preferentially Active Isoform Of Human Antithrombin. Acta Crystallographica A-Foundation And Advances, 55 (Supplement). p. 367.

Hoedemaeker, F. J. and Siegal, G. and Roe, S. M. and Driscoll, P. C. and Abrahams, J. P.. (1999) Crystal structure of the C-terminal SH2 domain of the p85 alpha regulatory subunit of phosphoinositide 3-kinase: An SH2 domain mimicking its own substrate (vol 292, pg 763, 1999). Journal of Molecular Biology, 294 (3). p. 825.

Elliott, P. R. and Abrahams, J. P. and Lomas, D. A.. (1999) Crystal structure of wildtype alpha(1)-antitrypsin. American Journal Of Respiratory And Critical Care Medicine, 159 (3). A192.

Leslie, A. G. W. and Abrahams, J. P. and Braig, K. and Lutter, R. and Menz, R. I. and Orriss, G. L. and van Raaij, M. J. and Walker, J. E.. (1999) The structure of bovine mitochondrial F-1-ATPase: an example of rotary catalysis. Biochemical Society Transactions, 27 (2). pp. 37-42.

1998

Skinner, R. and Chang, W. S. W. and Jin, L. and Pei, X. Y. and Huntington, J. A. and Abrahams, J. P. and Carrell, R. W. and Lomas, D. A.. (1998) 1BR8: Implications For Function And Therapy Of A 2.9A Structure Of Binary-Complexed Antithrombin. Worldwide Protein Data Bank. 1BR8.

Shirakihara, Y. and Leslie, A. G. W. and Abrahams, J. P. and Walker, J. E. and Ueda, T. and Sekimoto, Y. and Kambara, M. and Saika, K. and Kagawa, Y. and Yoshida, M.. (1998) 1SKY: Crystal Structure Of The Nucleotide Free Alpha3beta3 Sub-Complex Of F1-Atpase From The Thermophilic Bacillus Ps3. Worldwide Protein Data Bank. 1SKY.

Abrahams, J. P. and De Graaff, R. A. G.. (1998) New developments in phase refinement. Current Opinion in Structural Biology, 8 (5). pp. 601-605.

1997

Abrahams, J. P. and Buchanan, S. K. and Van Raaij, M. J. and Fearnley, I. M. and Leslie, A. G. W. and Walker, J. E.. (1997) 1EFR: Bovine Mitochondrial F1-Atpase Complexed With The Peptide Antibiotic Efrapeptin. Worldwide Protein Data Bank. 1EFR.

Abrahams, J. P.. (1997) Bias reduction in phase refinement by modified interference functions: Introducing the gamma correction. Acta Crystallographica. Section D, Biological Crystallography, 53. pp. 371-376.

Wardell, M. R. and Skinner, R. and Carter, D. C. and Twigg, P. D. and Abrahams, J. P.. (1997) Improved diffraction of antithrombin crystals grown in microgravity. Acta Crystallographica. Section D, Biological Crystallography, 53. pp. 622-625.

Carrell, R. and Skinner, R. and Jin, L. and Abrahams, J. P.. (1997) Structural mobility of antithrombin and its modulation by heparin. Thrombosis and Haemostasis, 78 (1). pp. 516-519.

1996

Abrahams, J. P. and Leslie, A. G. W. and Lutter, R. and Walker, J. E.. (1996) 1BMF: Bovine Mitochondrial F1-Atpase. Worldwide Protein Data Bank. 1BMF.

Van Raaij, M. and Abrahams, J. P. and Leslie, A. G. W. and Walker, J. E.. (1996) 1COW: Bovine Mitochondrial F1-Atpase Complexed With Aurovertin B. Worldwide Protein Data Bank. 1COW.

Abrahams, J. P. and Elliott, P. R. and Lomas, D. A. and Carrell, R. W.. (1996) 1PSI: Intact recombined alpha1-antitrypsin mutant PHE 51 to LEU. Worldwide Protein Data Bank. 1PSI.

Abrahams, J. P. and Leslie, A. G. W.. (1996) Methods used in the structure determination of bovine mitochondrial F-1 ATPase. Acta Crystallographica. Section D, Biological Crystallography, 52. pp. 30-42.

van Raaij, M. J. and Abrahams, J. P. and Leslie, A. G. W. and Walker, J. E.. (1996) The structure of bovine F-1-ATPase complexed with the antibiotic inhibitor aurovertin B. Proceedings of the National Academy of Sciences of the United States of America, 93 (14). pp. 6913-6917.

Abrahams, J. P. and Leslie, A. G. W. and Lutter, R. and Walker, J. E.. (1996) The structure of bovine mitochondrial F1-ATPase - An insight into ATP synthesis. Biophysical Journal, 70 (2, Part 2). A121.

Leslie, A. G. W. and Abrahams, J. P. and van Raaij, M. and Lutter, R. and Walker, J. E.. (1996) The structure of bovine mitochondrial F1-ATPase - an example of rotational catalysis? Acta Crystallographica A-Foundation And Advances, 52. C3.

1993

Lutter, R. and Abrahams, J. P. and Van Raaij, M. J. and Todd, R. J. and Lundqvist, T. and Buchanan, S. K. and Leslie, A. G. W. and Walker, J. E.. (1993) Crystallization of F1-ATPase from Bovine Heart Mitochondria. Journal of Molecular Biology, 229 (3). pp. 787-790.

Abrahams, J. P. and Lutter, R. and Todd, R. J. and Van Raaij, M. J. and Leslie, A. G. W. and Walker, J. E.. (1993) Inherent asymmetry of the structure of F1‐ATPase from bovine heart mitochondria at 6.5 A resolution. The EMBO journal, 12 (5). pp. 1775-1780.

1989

Kraal, B. and Abrahams, J. P. and Bosch, L.. (1989) Effects Of Kirromycin On The Elongation Factor-Ef-Tu And Its Interactions With Gdp Or Gtp And Transfer-Rna - The Application Of Zone-Interference Gel-Electrophoresis, A New Method For The Analysis Of Weak Complexes. In: The guanine-nucleotide binding proteins. Common structural and functional properties, 165. New York, pp. 121-129.