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Jongo, S. A. and Urbano Nsue Ndong Nchama, V. and Church, L. W. P. and Olotu, A. and Manock, S. R. and Schindler, T. and Mtoro, A. and Kc, N. and Devinsky, O. and Zan, E. and Hamad, A. and Nyakarungu, E. and Mpina, M. and Deal, A. and Bijeri, J. R. and Ondo Mangue, M. E. and Ntutumu Pasialo, B. E. and Nguema, G. N. and Rivas, M. R. and Chemba, M. and Ramadhani, K. K. and James, E. R. and Stabler, T. C. and Abebe, Y. and Riyahi, P. and Saverino, E. S. and Sax, J. and Hosch, S. and Tumbo, A. and Gondwe, L. and Segura, J. L. and Falla, C. C. and Phiri, W. P. and Hergott, D. E. B. and García, G. A. and Maas, C. and Murshedkar, T. and Billingsley, P. F. and Tanner, M. and Ayekaba, M. O. and Sim, B. K. L. and Daubenberger, C. and Richie, T. L. and Abdulla, S. and Hoffman, S. L.. (2023) Safety and immunogenicity of radiation-attenuated PfSPZ vaccine in equatoguinean infants, children, and adults. The American journal of tropical medicine and hygiene, 109 (1). pp. 138-146.

Abukhattab, S. and Hosch, S. and Abu-Rmeileh, N. M. E. and Hasan, S. and Vonaesch, P. and Crump, L. and Hattendorf, J. and Daubenberger, C. and Zinsstag, J. and Schindler, T.. (2023) Whole-genome sequencing for One Health surveillance of antimicrobial resistance in conflict zones: a case study of Salmonella spp. and Campylobacter spp. in the West Bank, Palestine. Applied and environmental microbiology, 89 (9). e00658-23.

Bechtold, P. and Wagner, P. and Hosch, S. and Gregorini, M. and Stark, W. J. and Gody, J. C. and Kodia-Lenguetama, E. R. and Pagonendji, M. S. and Donfack, O. T. and Phiri, W. P. and García, G. A. and Nsanzanbana, C. and Daubenberger, C. A. and Schindler, T. and Vickos, U.. (2023) Development and evaluation of PlasmoPod: a cartridge-based nucleic acid amplification test for rapid malaria diagnosis and surveillance. PLOS Glob Public Health, 3 (9). e0001516.

Hosch, S. and Yoboue, C. A. and Donfack, O. T. and Guirou, E. A. and Dangy, J. P. and Mpina, M. and Nyakurungu, E. and Blöchliger, K. and Guerra, C. A. and Phiri, W. P. and Ayekaba, M. O. and García, G. A. and Tanner, M. and Daubenberger, C. and Schindler, T.. (2022) Analysis of nucleic acids extracted from rapid diagnostic tests reveals a significant proportion of false positive test results associated with recent malaria treatment. Malar J, 21. p. 23.

Tegally, H. and San, J. E. and Cotten, M. and Moir, M. and Tegomoh, B. and Mboowa, G. and Martin, D. P. and Baxter, C. and Lambisia, A. W. and Diallo, A. and Amoako, D. G. and Diagne, M. M. and Sisay, A. and Zekri, A. N. and Gueye, A. S. and Sangare, A. K. and Ouedraogo, A. S. and Sow, A. and Musa, A. O. and Sesay, A. K. and Abias, A. G. and Elzagheid, A. I. and Lagare, A. and Kemi, A. S. and Abar, A. E. and Johnson, A. A. and Fowotade, A. and Oluwapelumi, A. O. and Amuri, A. A. and Juru, A. and Kandeil, A. and Mostafa, A. and Rebai, A. and Sayed, A. and Kazeem, A. and Balde, A. and Christoffels, A. and Trotter, A. J. and Campbell, A. and Keita, A. K. and Kone, A. and Bouzid, A. and Souissi, A. and Agweyu, A. and Naguib, A. and Gutierrez, A. V. and Nkeshimana, A. and Page, A. J. and Yadouleton, A. and Vinze, A. and Happi, A. N. and Chouikha, A. and Iranzadeh, A. and Maharaj, A. and Batchi-Bouyou, A. L. and Ismail, A. and Sylverken, A. A. and Goba, A. and Femi, A. and Sijuwola, A. E. and Marycelin, B. and Salako, B. L. and Oderinde, B. S. and Bolajoko, B. and Diarra, B. and Herring, B. L. and Tsofa, B. and Lekana-Douki, B. and Mvula, B. and Njanpop-Lafourcade, B. M. and Marondera, B. T. and Khaireh, B. A. and Kouriba, B. and Adu, B. and Pool, B. and McInnis, B. and Brook, C. and Williamson, C. and Nduwimana, C. and Anscombe, C. and Pratt, C. B. and Scheepers, C. and Akoua-Koffi, C. G. and Agoti, C. N. and Mapanguy, C. M. and Loucoubar, C. and Onwuamah, C. K. and Ihekweazu, C. and Malaka, C. N. and Peyrefitte, C. and Grace, C. and Omoruyi, C. E. and Rafaï, C. D. and Morang'a, C. M. and Erameh, C. and Lule, D. B. and Bridges, D. J. and Mukadi-Bamuleka, D. and Park, D. and Rasmussen, D. A. and Baker, D. and Nokes, D. J. and Ssemwanga, D. and Tshiabuila, D. and Amuzu, D. S. Y. and Goedhals, D. and Grant, D. S. and Omuoyo, D. O. and Maruapula, D. and Wanjohi, D. W. and Foster-Nyarko, E. and Lusamaki, E. K. and Simulundu, E. and Ong'era, E. M. and Ngabana, E. N. and Abworo, E. O. and Otieno, E. and Shumba, E. and Barasa, E. and Ahmed, E. B. and Ahmed, E. A. and Lokilo, E. and Mukantwari, E. and Philomena, E. and Belarbi, E. and Simon-Loriere, E. and Anoh, E. A. and Manuel, E. and Leendertz, F. and Taweh, F. M. and Wasfi, F. and Abdelmoula, F. and Takawira, F. T. and Derrar, F. and Ajogbasile, F. V. and Treurnicht, F. and Onikepe, F. and Ntoumi, F. and Muyembe, F. M. and Ragomzingba, F. E. Z. and Dratibi, F. A. and Iyanu, F. A. and Mbunsu, G. K. and Thilliez, G. and Kay, G. L. and Akpede, G. O. and van Zyl, G. U. and Awandare, G. A. and Kpeli, G. S. and Schubert, G. and Maphalala, G. P. and Ranaivoson, H. C. and Omunakwe, H. E. and Onywera, H. and Abe, H. and Karray, H. and Nansumba, H. and Triki, H. and Kadjo, H. A. A. and Elgahzaly, H. and Gumbo, H. and Mathieu, H. and Kavunga-Membo, H. and Smeti, I. and Olawoye, I. B. and Adetifa, I. M. O. and Odia, I. and Ben Boubaker, I. B. and Mohammad, I. A. and Ssewanyana, I. and Wurie, I. and Konstantinus, I. S. and Halatoko, J. W. A. and Ayei, J. and Sonoo, J. and Makangara, J. C. and Tamfum, J. M. and Heraud, J. M. and Shaffer, J. G. and Giandhari, J. and Musyoki, J. and Nkurunziza, J. and Uwanibe, J. N. and Bhiman, J. N. and Yasuda, J. and Morais, J. and Kiconco, J. and Sandi, J. D. and Huddleston, J. and Odoom, J. K. and Morobe, J. M. and Gyapong, J. O. and Kayiwa, J. T. and Okolie, J. C. and Xavier, J. S. and Gyamfi, J. and Wamala, J. F. and Bonney, J. H. K. and Nyandwi, J. and Everatt, J. and Nakaseegu, J. and Ngoi, J. M. and Namulondo, J. and Oguzie, J. U. and Andeko, J. C. and Lutwama, J. J. and Mogga, J. J. H. and O'Grady, J. and Siddle, K. J. and Victoir, K. and Adeyemi, K. T. and Tumedi, K. A. and Carvalho, K. S. and Mohammed, K. S. and Dellagi, K. and Musonda, K. G. and Duedu, K. O. and Fki-Berrajah, L. and Singh, L. and Kepler, L. M. and Biscornet, L. and de Oliveira Martins, L. and Chabuka, L. and Olubayo, L. and Ojok, L. D. and Deng, L. L. and Ochola-Oyier, L. I. and Tyers, L. and Mine, M. and Ramuth, M. and Mastouri, M. and ElHefnawi, M. and Mbanne, M. and Matsheka, M. I. and Kebabonye, M. and Diop, M. and Momoh, M. and Lima Mendonça, M. D. L. and Venter, M. and Paye, M. F. and Faye, M. and Nyaga, M. M. and Mareka, M. and Damaris, M. M. and Mburu, M. W. and Mpina, M. G. and Owusu, M. and Wiley, M. R. and Tatfeng, M. Y. and Ayekaba, M. O. and Abouelhoda, M. and Beloufa, M. A. and Seadawy, M. G. and Khalifa, M. K. and Matobo, M. M. and Kane, M. and Salou, M. and Mbulawa, M. B. and Mwenda, M. and Allam, M. and Phan, M. V. T. and Abid, N. and Rujeni, N. and Abuzaid, N. and Ismael, N. and Elguindy, N. and Top, N. M. and Dia, N. and Mabunda, N. and Hsiao, N. Y. and Silochi, N. B. and Francisco, N. M. and Saasa, N. and Bbosa, N. and Murunga, N. and Gumede, N. and Wolter, N. and Sitharam, N. and Ndodo, N. and Ajayi, N. A. and Tordo, N. and Mbhele, N. and Razanajatovo, N. H. and Iguosadolo, N. and Mba, N. and Kingsley, O. C. and Sylvanus, O. and Femi, O. and Adewumi, O. M. and Testimony, O. and Ogunsanya, O. A. and Fakayode, O. and Ogah, O. E. and Oludayo, O. E. and Faye, O. and Smith-Lawrence, P. and Ondoa, P. and Combe, P. and Nabisubi, P. and Semanda, P. and Oluniyi, P. E. and Arnaldo, P. and Quashie, P. K. and Okokhere, P. O. and Bejon, P. and Dussart, P. and Bester, P. A. and Mbala, P. K. and Kaleebu, P. and Abechi, P. and El-Shesheny, R. and Joseph, R. and Aziz, R. K. and Essomba, R. G. and Ayivor-Djanie, R. and Njouom, R. and Phillips, R. O. and Gorman, R. and Kingsley, R. A. and Neto Rodrigues, Rmdesa and Audu, R. A. and Carr, R. A. A. and Gargouri, S. and Masmoudi, S. and Bootsma, S. and Sankhe, S. and Mohamed, S. I. and Femi, S. and Mhalla, S. and Hosch, S. and Kassim, S. K. and Metha, S. and Trabelsi, S. and Agwa, S. H. and Mwangi, S. W. and Doumbia, S. and Makiala-Mandanda, S. and Aryeetey, S. and Ahmed, S. S. and Ahmed, S. M. and Elhamoumi, S. and Moyo, S. and Lutucuta, S. and Gaseitsiwe, S. and Jalloh, S. and Andriamandimby, S. F. and Oguntope, S. and Grayo, S. and Lekana-Douki, S. and Prosolek, S. and Ouangraoua, S. and van Wyk, S. and Schaffner, S. F. and Kanyerezi, S. and Ahuka-Mundeke, S. and Rudder, S. and Pillay, S. and Nabadda, S. and Behillil, S. and Budiaki, S. L. and van der Werf, S. and Mashe, T. and Mohale, T. and Le-Viet, T. and Velavan, T. P. and Schindler, T. and Maponga, T. G. and Bedford, T. and Anyaneji, U. J. and Chinedu, U. and Ramphal, U. and George, U. E. and Enouf, V. and Nene, V. and Gorova, V. and Roshdy, W. H. and Karim, W. A. and Ampofo, W. K. and Preiser, W. and Choga, W. T. and Ahmed, Y. A. and Ramphal, Y. and Bediako, Y. and Naidoo, Y. and Butera, Y. and de Laurent, Z. R. and Ouma, A. E. O. and von Gottberg, A. and Githinji, G. and Moeti, M. and Tomori, O. and Sabeti, P. C. and Sall, A. A. and Oyola, S. O. and Tebeje, Y. K. and Tessema, S. K. and de Oliveira, T. and Happi, C. and Lessells, R. and Nkengasong, J. and Wilkinson, E.. (2022) The evolving SARS-CoV-2 epidemic in Africa: insights from rapidly expanding genomic surveillance. Science, 378 (6615). eabq5358.

Hosch, S. and Mpina, M. and Nyakurungu, E. and Silochi Borico, N. and Obama, T. M. A. and Ovona, M. C. and Wagner, P. and Rubin, S. E. and Vickos, U. and Milang, D. V. N. and Ondo'o Ayekaba, M. and Phiri, W. P. and Daubenberger, C. A. and Schindler, T.. (2022) Genomic surveillance enables the identification of co-infections with multiple SARS-CoV-2 lineages in equatorial Guinea. Front Public Health, 9. p. 818401.

Yoboue, C. A. and Hosch, S. and Donfack, O. T. and Guirou, E. A. and Nlavo, B. M. and Ayekaba, M. O. and Guerra, C. and Phiri, W. P. and Garcia, G. A. and Schindler, T. and Daubenberger, C. A.. (2022) Characterising co-infections with Plasmodium spp., Mansonella perstans or Loa loa in asymptomatic children, adults and elderly people living on Bioko Island using nucleic acids extracted from malaria rapid diagnostic tests. PLoS Negl Trop Dis, 16 (1). e0009798.

Bechtold, P. and Wagner, P. and Hosch, S. and Siegrist, D. and Ruiz-Serrano, A. and Gregorini, M. and Mpina, M. and Ondó, F. A. and Obama, J. and Ayekaba, M. O. and Engler, O. and Stark, W. J. and Daubenberger, C. A. and Schindler, T.. (2021) Rapid identification of SARS-CoV-2 variants of concern using a portable peakPCR platform. Analytical chemistry, 93 (49). pp. 16350-16359.

Dudas, G. and Hong, S. L. and Potter, B. I. and Calvignac-Spencer, S. and Niatou-Singa, F. S. and Tombolomako, T. B. and Fuh-Neba, T. and Vickos, U. and Ulrich, M. and Leendertz, F. H. and Khan, K. and Huber, C. and Watts, A. and Olendraite, I. and Snijder, J. and Wijnant, K. N. and Bonvin, Amjj and Martres, P. and Behillil, S. and Ayouba, A. and Maidadi, M. F. and Djomsi, D. M. and Godwe, C. and Butel, C. and Simaitis, A. and Gabrielaite, M. and Katenaite, M. and Norvilas, R. and Raugaite, L. and Koyaweda, G. W. and Kandou, J. K. and Jonikas, R. and Nasvytiene, I. and Zemeckiene, Z. and Gečys, D. and Tamusauskaite, K. and Norkiene, M. and Vasiliunaite, E. and Timinskas, A. and Alzbutas, G. and Aziza, A. A. and Lusamaki, E. K. and Cigolo, J. M. and Mawete, F. M. and Lofiko, E. L. and Kingebeni, P. M. and Tamfum, J. M. and Belizaire, M. R. D. and Essomba, R. G. and Assoumou, M. C. O. and Mboringong, A. B. and Dieng, A. B. and Juozapaite, D. and Hosch, S. and Obama, J. and Ayekaba, M. O. and Naumovas, D. and Pautienius, A. and Rafaï, C. D. and Vitkauskienė, A. and Ugenskienė, R. and Gedvilaitė, A. and Čere�kevičius, D. and Lesauskaitė, V. and Gri�kevičius, L. and Baele, G.. (2021) Emergence and spread of SARS-CoV-2 lineage B.1.620 with variant of concern-like mutations and deletions. Nat Commun, 12. p. 5769.

Jongo, S. A. and Urbano, V. and Church, L. W. P. and Olotu, A. and Manock, S. R. and Schindler, T. and Mtoro, A. and Kc, N. and Hamad, A. and Nyakarungu, E. and Mpina, M. and Deal, A. and Bijeri, J. R. and Ondo Mangue, M. E. and Ntutumu Pasialo, B. E. and Nguema, G. N. and Owono, S. N. and Rivas, M. R. and Chemba, M. and Kassim, K. R. and James, E. R. and Stabler, T. and Abebe, Y. and Saverino, E. and Sax, J. and Hosch, S. and Tumbo, A. M. and Gondwe, L. and Segura, J. L. and Falla, C. C. and Phiri, W. P. and Hergott, D. E. B. and Garcia, G. A. and Schwabe, C. and Maas, C. D. and Murshedkar, T. and Billingsley, P. F. and Tanner, M. and Ayekaba, M. O. and Sim, B. K. L. and Daubenberger, C. and Richie, T. L. and Abdulla, S. and Hoffman, S. L.. (2021) Immunogenicity and protective efficacy of radiation-attenuated and chemo-attenuated PfSPZ vaccines in Equatoguinean adults. Am J Trop Med Hyg, 104 (1). pp. 283-293.

Krähenbühl, Silvan and Studer, Fabian and Guirou, Etienne and Deal, Anna and Mächler, Philipp and Hosch, Salome and Mpina, Maximilian and Mswata, Sarah and Daubenberger, Claudia and Schindler, Tobias. (2020) ELIMU-MDx: a web-based, open-source platform for storage, management and analysis of diagnostic qPCR data. Biotechniques, 68 (1). pp. 22-27.

Thesis

Hosch, Salome. Investigating drug resistance markers, evolution and co-infections of pathogens of public health concern using portable molecular detection and sequencing tools. 2023, Doctoral Thesis, University of Basel, Associated Institution, Faculty of Science.

Other

Guirou, Etienne and Schindler, Tobias and Hosch, Salome and Donfack, Olivier Tresor and Yoboue, Charlene Aya and Kraehenbuehl, Silvan and Deal, Anna and Cosi, Glenda and Gondwe, Linda and Mwangoka, Grace and Masuki, Heavenlight and Salim, Nahya and Mpina, Maxmillian and Said, Jongo and Abdulla, Salim and Hoffman, Stephen and Nlavo, Bonifacio Manguire and Maas, Carl and Falla, Carlos Cortes and Phiri, Wonder and Garcia, Guillermo and Tanner, Marcel and Daubenberger, Claudia. (2020) Molecular malaria surveillance using a novel protocol for extraction and analysis of nucleic acids retained on used rapid diagnostic tests. Scientific Reports. London.