Items where Author is "Stadler, T."

2023

Zwyer, M. and Rutaihwa, L. K. and Windels, E. and Hella, J. and Menardo, F. and Sasamalo, M. and Sommer, G. and Schmülling, L. and Borrell, S. and Reinhard, M. and Dötsch, A. and Hiza, H. and Stritt, C. and Sikalengo, G. and Fenner, L. and De Jong, B. C. and Kato-Maeda, M. and Jugheli, L. and Ernst, J. D. and Niemann, S. and Jeljeli, L. and Ballif, M. and Egger, M. and Rakotosamimanana, N. and Yeboah-Manu, D. and Asare, P. and Malla, B. and Dou, H. Y. and Zetola, N. and Wilkinson, R. J. and Cox, H. and Carter, E. J. and Gnokoro, J. and Yotebieng, M. and Gotuzzo, E. and Abimiku, A. and Avihingsanon, A. and Xu, Z. M. and Fellay, J. and Portevin, D. and Reither, K. and Stadler, T. and Gagneux, S. and Brites, D.. (2023) Back-to-Africa introductions of Mycobacterium tuberculosis as the main cause of tuberculosis in Dar es Salaam, Tanzania. PLoS Pathog, 19 (4). e1010893.

Loiseau, C. and Windels, E. M. and Gygli, S. M. and Jugheli, L. and Maghradze, N. and Brites, D. and Ross, A. and Goig, G. and Reinhard, M. and Borrell, S. and Trauner, A. and Dötsch, A. and Aspindzelashvili, R. and Denes, R. and Reither, K. and Beisel, C. and Tukvadze, N. and Avaliani, Z. and Stadler, T. and Gagneux, S.. (2023) The relative transmission fitness of multidrug-resistant; Mycobacterium tuberculosis; in a drug resistance hotspot. Nat Commun, 14. p. 1988.

2022

Jahn, K. and Dreifuss, D. and Topolsky, I. and Kull, A. and Ganesanandamoorthy, P. and Fernandez-Cassi, X. and Banziger, C. and Devaux, A. J. and Stachler, E. and Caduff, L. and Cariti, F. and Corzon, A. T. and Fuhrmann, L. and Chen, C. R. and Jablonski, K. P. and Nadeau, S. and Feldkamp, M. and Beisel, C. and Aquino, C. and Stadler, T. and Ort, C. and Kohn, T. and Julian, T. R. and Beerenwinkel, N.. (2022) Early detection and surveillance of SARS-CoV-2 genomic variants in wastewater using COJAC. Nat Microbiol, 7 (8). pp. 1151-1160.

Huisman, J. S. and Scire, J. and Caduff, L. and Fernandez-Cassi, X. and Ganesanandamoorthy, P. and Kull, A. and Scheidegger, A. and Stachler, E. and Boehm, A. B. and Hughes, B. and Knudson, A. and Topol, A. and Wigginton, K. R. and Wolfe, M. K. and Kohn, T. and Ort, C. and Stadler, T. and Julian, T. R.. (2022) Wastewater-based estimation of the effective reproductive number of SARS-CoV-2. Environmental health perspectives, 130 (5). p. 57011.

2021

Pečerska, J. and Kuhnert, D. and Meehan, C. J. and Coscolla, M. and de Jong, B. C. and Gagneux, S. and Stadler, T.. (2021) Quantifying transmission fitness costs of multi-drug resistant tuberculosis. Epidemics, 36. p. 100471.

2020

Scire, J. and Nadeau, S. and Vaughan, T. and Brupbacher, G. and Fuchs, S. and Sommer, J. and Koch, K. N. and Misteli, R. and Mundorff, L. and Götz, T. and Eichenberger, T. and Quinto, C. and Savic, M. and Meienberg, A. and Burkard, T. and Mayr, M. and Meier, C. A. and Widmer, A. and Kuehl, R. and Egli, A. and Hirsch, H. H. and Bassetti, S. and Nickel, C. H. and Rentsch, K. S. and Kübler, W. and Bingisser, R. and Battegay, M. and Tschudin-Sutter, S. and Stadler, T.. (2020) Reproductive number of the COVID-19 epidemic in Switzerland with a focus on the Cantons of Basel-Stadt and Basel-Landschaft. Swiss Med Wkly, 150. w20271.

2012

Leventhal, G. E. and Kouyos, R. and Stadler, T. and von Wyl, V. and Yerly, S. and Boni, J. and Cellerai, C. and Klimkait, T. and Gunthard, H. F. and Bonhoeffer, S.. (2012) Inferring epidemic contact structure from phylogenetic trees. PLoS Computational Biology, Vol. 8, H. 3 , e1002413.