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2020

Parbhoo, Sonali and Wieser, Mario and Wieczorek, Aleksander and Roth, Volker. (2020) Information Bottleneck for Estimating Treatment Effects with Systematically Missing Covariates. Entropy, 22 (4). p. 389.

Thorball, Christian W. and Borghesi, Alessandro and Bachmann, Nadine and Von Siebenthal, Chantal and Vongrad, Valentina and Turk, Teja and Neumann, Kathrin and Beerenwinkel, Niko and Bogojeska, Jasmina and Roth, Volker and Kok, Yik Lim and Parbhoo, Sonali and Wieser, Mario and Böni, Jürg and Perreau, Matthieu and Klimkait, Thomas and Yerly, Sabine and Battegay, Manuel and Rauch, Andri and Schmid, Patrick and Bernasconi, Enos and Cavassini, Matthias and Kouyos, Roger D. and Günthard, Huldrych F. and Metzner, Karin J. and Fellay, Jacques and Swiss HIV Cohort Study, . (2020) Host Genomics of the HIV-1 Reservoir Size and Its Decay Rate During Suppressive Antiretroviral Treatment. Journal of Acquired Immune Deficiency Syndromes, 85 (4). pp. 517-524.

Parbhoo, Sonali and Wieser, Mario and Roth, Volker and Doshi-Velez, Finale. (2020) Transfer Learning from Well-Curated to Less-Resourced Populations with HIV. In: Proceedings of the 5th Machine Learning for Healthcare Conference, 126. pp. 589-609.

Wu, Mike and Parbhoo, Sonali and Hughes, Michael C. and Kindle, Ryan and Celi, Leo A. and Zazzi, Maurizio and Roth, Volker and Doshi-Velez, Finale. (2020) Regional Tree Regularization for Interpretability in Deep Neural Networks. In: The Thirty-Fourth AAAI Conference on Artificial Intelligence, AAAI 2020, 34. pp. 6413-6421.

2019

Parbhoo, Sonali. Causal inference and interpretable machine learning for personalised medicine. 2019, Doctoral Thesis, University of Basel, Faculty of Science.

Kortylewski, Adam and Wieczorek, Aleksander and Wieser, Mario and Blumer, Clemens and Parbhoo, Sonali and Morel-Forster, Andreas and Roth, Volker and Vetter, Thomas. (2019) Greedy Structure Learning of Hierarchical Compositional Models. In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR). pp. 11612-11621.

2018

Kortylewski, Adam and Wieser, Mario and Morel-Forster, Andreas and Wieczorek, Aleksander and Parbhoo, Sonali and Roth, Volker and Vetter, Thomas. (2018) Informed MCMC with Bayesian Neural Networks for Facial Image Analysis. In: NeurIPS 2018, Bayesian Deep Learning Workshop. pp. 1-4.

Parbhoo, Sonali and Gottesman, Omer and Ross, Andrew Slavin and Komorowski, Matthieu and Faisal, Aldo and Bon, Isabella and Roth, Volker and Doshi-Velez, Finale. (2018) Improving counterfactual reasoning with kernelised dynamic mixing models. PloS one, 13 (11). e0205839.

Wu, Mike and Hughes, Michael C. and Parbhoo, Sonali and Zazzi, Maurizio and Roth, Volker and Doshi-Velez, Finale. (2018) Beyond Sparsity: Tree Regularization of Deep Models for Interpretability. In: Proceedings of the Thirty-Second AAAI Conference on Artificial Intelligence, (AAAI-18). pp. 1670-1678.

2017

Parbhoo, Sonali and Bogojeska, Jasmina and Zazzi, Maurizio and Roth, Volker and Doshi-Velez, Finale. (2017) Combining Kernel and Model Based Learning for HIV Therapy Selection. Amia Summits on Translational Science Proceedings, 2017. pp. 239-248.

2016

Kaufmann, Dinu and Parbhoo, Sonali and Wieczorek, Aleksander and Keller, Sebastian and Adametz, David and Roth, Volker . (2016) Bayesian Markov Blanket Estimation. In: Proceedings of the 19th International Conference on Artificial Intelligence and Statistics, AISTATS 2016, Cadiz, Spain, May 9-11, 2016, 51. pp. 333-341.