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Kaiser, Matthias and Jug, Florian and Julou, Thomas and Deshpande, Siddharth and Pfohl, Thomas and Silander, Olin K. and Myers, Gene and van Nimwegen, Erik. (2018) Monitoring single-cell gene regulation under dynamically controllable conditions with integrated microfluidics and software. Nature Communications (9). p. 212.

Freed, Nikki E. and Bumann, Dirk and Silander, Olin K.. (2016) Combining Shigella Tn-seq data with gold-standard E. coli gene deletion data suggests rare transitions between essential and non-essential gene functionality. BMC Microbiology, 16 (1). p. 203.

Bertels, Frederic and Silander, Olin K. and Pachkov, Mikhail and Rainey, Paul B. and van Nimwegen, Erik. (2014) Automated reconstruction of whole genome phylogenies from short sequence reads. Molecular biology and evolution, Vol. 31, no. 5. pp. 1077-1088.

Blank, Diana and Wolf, Luise and Ackermann, Martin and Silander, Olin K.. (2014) The predictability of molecular evolution during functional innovation. Proceedings of the National Academy of Sciences, 111 (8). pp. 3044-3049.

Hofsteenge, Niels and van Nimwegen, Erik and Silander, Olin K.. (2013) Quantitative analysis of persister fractions suggests different mechanisms of formation among environmental isolates of E. coli. BMC microbiology, Vol. 13, 25.