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Matschiner, Michael. Population genetic and phylogenetic insights into the adaptive radiation of Antarctic notothenioid fishes. 2011, Doctoral Thesis, University of Basel, Faculty of Science.

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Matschiner, Michael and Hanel, Reinhold and Salzburger, Walter. (2010) Phylogeography and speciation processes in marine fishes and fishes from large freshwater lakes. In: Phylogeography: concepts, intraspecific patterns, and speciation processes. New York, pp. 1-31.

Matschiner, Michael and Hanel, Reinhold and Salzburger, Walter. (2009) Gene flow by larval dispersal in the Antarctic notothenioid fish Gobionotothen gibberifrons. Molecular ecology, Vol. 18, no. 12. pp. 2574-2587.

Matschiner, Michael and Salzburger, Walter. (2009) TANDEM: integrating automated allele binning into genetics and genomics workflows. Bioinformatics, Vol. 25, H. 15. pp. 1982-1983.