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Sequence analysis of a DNA fragment from Sinorhizobium fredii USDA257 which extends the nitrogen fixation host range of Rhizobium species NGR234 to soybean, Glycine max (L.) Merr cultivar Peking

Boboye, B. and Nyakatura, G. and Rosenthal, A. and Perret, X. and Broughton, W. J. and Boller, T.. (2009) Sequence analysis of a DNA fragment from Sinorhizobium fredii USDA257 which extends the nitrogen fixation host range of Rhizobium species NGR234 to soybean, Glycine max (L.) Merr cultivar Peking. Symbiosis, Vol. 48, H. 1-3. pp. 110-119.

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Official URL: http://edoc.unibas.ch/dok/A6308440

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Abstract

A fragment of DNA (pBTBX) from the genome of Sinorhizobium fredii USDA257 was sequenced by shotgun strategy to identify the potential genes which enabled the Rhizobium species NGR234 to fix nitrogen on soybean, Glycine max (L.) Merr cv. Peking. The total length of the cosmid is 32,824 base pairs with a GC content of 61%. A 29 open reading frames (ORF) were identified representing 71.8% (23,574 bp) of the cosmid. Out of these ORF, 96.5% (22,749 bp) were identical and similar to reported and hypothetical genes and proteins. The remaining 3.5% (825 bp) had no apparent similarity to any genes in the data base. Gene and gene products found on the DNA fragment include those involved in the synthesis of FeMo component of nitrogenase, regulation of nitrogen fixation, transport of amino acids and sugars, chemotaxis and transcriptional regulation.
Faculties and Departments:05 Faculty of Science > Departement Umweltwissenschaften > Ehemalige Einheiten Umweltwissenschaften > Pflanzenphysiologie Pathogenabwehr (Boller)
UniBasel Contributors:Boller, Thomas
Item Type:Article, refereed
Article Subtype:Research Article
Publisher:Balaban
ISSN:0334-5114
Note:Publication type according to Uni Basel Research Database: Journal article
Identification Number:
Last Modified:07 Nov 2014 08:29
Deposited On:07 Nov 2014 08:29

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