Items where Author is "Pooggin, Mikhail M."

2019

Massart, Sebastien and Chiumenti, Michela and De Jonghe, Kris and Glover, Rachel and Haegeman, Annelies and Koloniuk, Igor and Komínek, Petr and Kreuze, Jan and Kutnjak, Denis and Lotos, Leonidas and Maclot, François and Maliogka, Varvara and Maree, Hans J. and Olivier, Thibaut and Olmos, Antonio and Pooggin, Mikhail M. and Reynard, Jean-Sébastien and Ruiz-García, Ana B. and Safarova, Dana and Schneeberger, Pierre H. H. and Sela, Noa and Turco, Silvia and Vainio, Eeva J. and Varallyay, Eva and Verdin, Eric and Westenberg, Marcel and Brostaux, Yves and Candresse, Thierry. (2019) Virus detection by high-throughput sequencing of small RNAs: large scale performance testing of sequence analysis strategies. Phytopathology, 109 (3). pp. 488-497.

2018

Malpica-López, Nachelli and Rajeswaran, Rajendran and Beknazariants, Daria and Seguin, Jonathan and Golyaev, Victor and Farinelli, Laurent and Pooggin, Mikhail M.. (2018) Revisiting the Roles of Tobamovirus Replicase Complex Proteins in Viral Replication and Silencing Suppression. Molecular Plant-Microbe Interactions, 31 (1). pp. 125-144.

Turco, Silvia and Golyaev, Victor and Seguin, Jonathan and Gilli, Céline and Farinelli, Laurent and Boller, Thomas and Schumpp, Olivier and Pooggin, Mikhail M.. (2018) Small RNA-Omics for Virome Reconstruction and Antiviral Defense Characterization in Mixed Infections of Cultivated Solanum Plants. Molecular plant-microbe interactions : MPMI, 31 (7). pp. 707-723.

2016

Karthikeyan, Chockalingam and Patil, Basavaprabhu L. and Borah, Basanta K. and Resmi, Thulasi R. and Turco, Silvia and Pooggin, Mikhail M. and Hohn, Thomas and Veluthambi, Karuppannan. (2016) Emergence of a Latent Indian Cassava Mosaic Virus from Cassava Which Recovered from Infection by a Non-Persistent Sri Lankan Cassava Mosaic Virus. Viruses, 8 (10). p. 264.

Fuentes, Alejandro and Carlos, Natacha and Ruiz, Yoslaine and Callard, Danay and Sánchez, Yadira and Ochagavía, María Elena and Seguin, Jonathan and Malpica-López, Nachelli and Hohn, Thomas and Lecca, Maria Rita and Pérez, Rosabel and Doreste, Vivian and Rehrauer, Hubert and Farinelli, Laurent and Pujol, Merardo and Pooggin, Mikhail M.. (2016) Field Trial and Molecular Characterization of RNAi-Transgenic Tomato Plants That Exhibit Resistance to Tomato Yellow Leaf Curl Geminivirus. Molecular Plant-Microbe Interactions, 29 (3). pp. 197-209.

Seguin, Jonathan and Otten, Patricia and Baerlocher, Loïc and Farinelli, Laurent and Pooggin, Mikhail M.. (2016) MISIS-2: A bioinformatics tool for in-depth analysis of small RNAs and representation of consensus master genome in viral quasispecies. Journal of Virological Methods, 233. pp. 37-40.

Zvereva, Anna S. and Golyaev, Victor and Turco, Silvia and Gubaeva, Ekaterina G. and Rajeswaran, Rajendran and Schepetilnikov, Mikhail V. and Srour, Ola and Ryabova, Lyubov A. and Boller, Thomas and Pooggin, Mikhail M.. (2016) Viral protein suppresses oxidative burst and salicylic acid-dependent autophagy and facilitates bacterial growth on virus-infected plants. New Phytologis, 211 (3). pp. 1020-1034.

2014

Seguin, Jonathan and Rajeswaran, Rajendran and Malpica-López, Nachelli and Martin, Robert R. and Kasschau, Kristin and Dolja, Valerian V. and Otten, Patricia and Farinelli, Laurent and Pooggin, Mikhail M.. (2014) De Novo Reconstruction of Consensus Master Genomes of Plant RNA and DNA Viruses from siRNAs. PLoS ONE, Vol. 9, H. 2 , e88513.

Rajeswaran, Rajendran and Seguin, Jonathan and Chabannes, Matthieu and Duroy, Pierre-Olivier and Laboureau, Nathalie and Farinelli, Laurent and Iskra-Caruana, Marie-Line and Pooggin, Mikhail M.. (2014) Evasion of Short Interfering RNA-Directed Antiviral Silencing in Musa acuminata Persistently Infected with Six Distinct Banana Streak Pararetroviruses. Journal of virology, Vol. 88, H. 19. pp. 11516-11528.

Rajeswaran, Rajendran and Golyaev, Victor and Seguin, Jonathan and Zvereva, Anna S. and Farinelli, Laurent and Pooggin, Mikhail M.. (2014) Interactions of rice tungro bacilliform pararetrovirus and its protein P4 with plant RNA silencing machinery. Molecular plant-microbe interactions, Vol. 27, H. 12. pp. 1370-1378.

Seguin, Jonathan and Otten, Patricia and Baerlocher, Loic and Farinelli, Laurent and Pooggin, Mikhail M.. (2014) MISIS: A bioinformatics tool to view and analyze maps of small RNAs derived from viruses and genomic loci generating multiple small RNAs. Journal of virological methods, Vol. 195. pp. 120-122.

2012

Zvereva, Anna S. and Pooggin, Mikhail M.. (2012) Silencing and innate immunity in plant defense against viral and non-viral pathogens. Viruses, Vol. 4, H. 11. pp. 2578-2597.

2008

Pooggin, Mikhail M. and Fütterer, Johannes and Hohn, Thomas. (2008) Cross-species functionality of pararetroviral elements driving ribosome shunting. PLoS ONE, Vol. 3, H. 2 , e1650.

Shivaprasad, Padubidri V. and Rajeswaran, Rajendran and Blevins, Todd and Schoelz, James and Meins, Frederick and Hohn, Thomas and Pooggin, Mikhail M.. (2008) The CaMV transactivator/viroplasmin interferes with RDR6-dependent trans-acting and secondary siRNA pathways in Arabidopsis. Nucleic Acids Research, 36 (18). pp. 5896-5909.

2007

Rajeswaran, Rajendran and Sunitha, Sukumaran and Shivaprasad, Padubidri V. and Pooggin, Mikhail M. and Hohn, Thomas and Veluthambi, Karuppannan. (2007) The mungbean yellow mosaic begomovirus transcriptional activator protein transactivates the viral promoter-driven transgene and causes toxicity in transgenic tobacco plants. Molecular plant-microbe interactions, Vol. 20, H. 12. pp. 1545-1554.

Vanderschuren, Hervé and Akbergenov, Rashid and Pooggin, Mikhail M. and Hohn, Thomas and Gruissem, Wilhelm and Zhang, Peng. (2007) Transgenic cassava resistance to African cassava mosaic virus is enhanced by viral DNA-A bidirectional promoter-derived siRNAs. Plant molecular biology, Vol. 64, H. 5. pp. 549-557.

2006

Blevins, Todd and Rajeswaran, Rajendran and Shivaprasad, Padubidri V. and Beknazariants, Daria and Si-Ammour, Azeddine and Park, Hyun-Sook and Vazquez, Franck and Robertson, Dominique and Meins, Frederick and Hohn, Thomas and Pooggin, Mikhail M.. (2006) Four plant Dicers mediate viral small RNA biogenesis and DNA virus induced silencing. Nucleic Acids Research, 34 (21). pp. 6233-6246.

Pooggin, Mikhail M. and Ryabova, Lyubov A. and He, Xiaoyuan and Fütterer, Johannes and Hohn, Thomas. (2006) Mechanism of ribosome shunting in Rice tungro bacilliform pararetrovirus. RNA, Vol. 12, H. 5. pp. 841-850.

Akbergenov, Rashid and Si-Ammour, Azeddine and Blevins, Todd and Amin, Imran and Kutter, Claudia and Vanderschuren, Herve and Zhang, Peng and Gruissem, Wilhelm and Meins, Frederick and Hohn, Thomas and Pooggin, Mikhail M.. (2006) Molecular characterization of geminivirus-derived small RNAs in different plant species. Nucleic Acids Research, 34 (2). pp. 462-471.

Ryabova, Lyubov A. and Pooggin, Mikhail M. and Hohn, Thomas. (2006) Translation reinitiation and leaky scanning in plant viruses. Virus research, Vol. 119, H. 1. pp. 52-62.

2005

Shivaprasad, P. V. and Akbergenov, Rashid and Trinks, Daniela and Rajeswaran, R. and Veluthambi, K. and Hohn, Thomas and Pooggin, Mikhail M.. (2005) Promoters, transcripts, and regulatory proteins of Mungbean yellow mosaic geminivirus. Journal of virology, Vol. 79, H. 13. pp. 8149-8163.

Trinks, Daniela and Rajeswaran, R. and Shivaprasad, P. V. and Akbergenov, Rashid and Oakeley, Edward J. and Veluthambi, K. and Hohn, Thomas and Pooggin, Mikhail M.. (2005) Suppression of RNA silencing by a geminivirus nuclear protein, AC2, correlates with transactivation of host genes. Journal of virology, Vol. 79, H. 4. pp. 2517-2527.