Items where Author is "Kouyos, Roger D."

2022

Salazar-Vizcaya, Luisa and Kusejko, Katharina and Günthard, Huldrych F. and Böni, Jürg and Metzner, Karin J. and Braun, Dominique L. and Nicca, Dunja and Bernasconi, Enos and Calmy, Alexandra and Darling, Katharine E. A. and Wandeler, Gilles and Kouyos, Roger D. and Rauch, Andri and the Swiss H.I.V. Cohort Study, . (2022) An Approach to Quantifying the Interaction between Behavioral and Transmission Clusters. Viruses, 14 (4). p. 784.

2021

Braun, Dominique L. and Hampel, Benjamin and Ledergerber, Bruno and Grube, Christina and Nguyen, Huyen and Künzler-Heule, Patrizia and Shah, Cyril and Salazar-Vizcaya, Luisa and Conen, Anna and Flepp, Markus and Stöckle, Marcel and Béguelin, Charles and Schmid, Patrick and Rougemont, Mathieu and Delaloye, Julie and Bernasconi, Enos and Nicca, Dunja and Böni, Jürg and Rauch, Andri and Kouyos, Roger D. and Günthard, Huldrych F. and Fehr, Jan S.. (2021) A treatment-as-prevention trial to eliminate hepatitis C among men who have sex with men living with Human Immunodeficiency Virus (HIV) in the Swiss HIV Cohort Study. Clinical Infectious Diseases, 73 (7). e2194-e2202.

Roth, Jan A. and Radevski, Gorjan and Marzolini, Catia and Rauch, Andri and Günthard, Huldrych F. and Kouyos, Roger D. and Fux, Christoph A. and Scherrer, Alexandra U. and Calmy, Alexandra and Cavassini, Matthias and Kahlert, Christian R. and Bernasconi, Enos and Bogojeska, Jasmina and Battegay, Manuel. (2021) Cohort-derived machine learning models for individual prediction of chronic kidney disease in people living with Human Immunodeficiency Virus: a prospective multicentre cohort study. Journal of Infectious Diseases, 224 (7). pp. 1198-1208.

2020

Salazar-Vizcaya, Luisa and Kusejko, Katharina and Schmidt, Axel J. and Carrillo-Montoya, Germán and Nicca, Dunja and Wandeler, Gilles and Braun, Dominique L. and Fehr, Jan and Darling, Katharine E. A. and Bernasconi, Enos and Schmid, Patrick and Günthard, Huldrych F. and Kouyos, Roger D. and Rauch, Andri. (2020) Clusters of Sexual Behavior in Human Immunodeficiency Virus-positive Men Who Have Sex With Men Reveal Highly Dissimilar Time Trends. Clinical Infectious Diseases, 70 (3). pp. 416-424.

Wan, Chenjie and Bachmann, Nadine and Mitov, Venelin and Blanquart, François and Céspedes, Susana Posada and Turk, Teja and Neumann, Kathrin and Beerenwinkel, Niko and Bogojeska, Jasmina and Fellay, Jacques and Roth, Volker and Böni, Jürg and Perreau, Matthieu and Klimkait, Thomas and Yerly, Sabine and Battegay, Manuel and Walti, Laura and Calmy, Alexandra and Vernazza, Pietro and Bernasconi, Enos and Cavassini, Matthias and Metzner, Karin J. and Günthard, Huldrych F. and Kouyos, Roger D. and Swiss HIV Cohort Study, . (2020) Heritability of the HIV-1 reservoir size and decay under long-term suppressive ART. Nature Communications, 11 (1). p. 5542.

Thorball, Christian W. and Borghesi, Alessandro and Bachmann, Nadine and Von Siebenthal, Chantal and Vongrad, Valentina and Turk, Teja and Neumann, Kathrin and Beerenwinkel, Niko and Bogojeska, Jasmina and Roth, Volker and Kok, Yik Lim and Parbhoo, Sonali and Wieser, Mario and Böni, Jürg and Perreau, Matthieu and Klimkait, Thomas and Yerly, Sabine and Battegay, Manuel and Rauch, Andri and Schmid, Patrick and Bernasconi, Enos and Cavassini, Matthias and Kouyos, Roger D. and Günthard, Huldrych F. and Metzner, Karin J. and Fellay, Jacques and Swiss HIV Cohort Study, . (2020) Host Genomics of the HIV-1 Reservoir Size and Its Decay Rate During Suppressive Antiretroviral Treatment. Journal of Acquired Immune Deficiency Syndromes, 85 (4). pp. 517-524.

2019

Salazar-Vizcaya, Luisa and Kouyos, Roger D. and Metzner, Karin J. and Cortes, Kamila Caraballo and Boni, Jurg and Shah, Cyril and Fehr, Jan and Braun, Dominique L. and Bernasconi, Enos and Mbunkah, Herbert A. and Hoffmann, Matthias and Labhardt, Niklaus and Cavassini, Matthias and Rougemont, Mathieu and Gunthard, Huldrych F. and Keiser, Olivia and Rauch, Andri and Aubert, V. and Battegay, M. and Bernasconi, E. and Boni, J. and Braun, D. L. and Bucher, H. C. and Calmy, A. and Cavassini, M. and Ciuffi, A. and Dollenmaier, G. and Egger, M. and Elzi, L. and Fehr, J. and Fellay, J. and Furrer, H. and Fux, C. A. and Gunthard, H. F. and Haerry, D. and Hasse, B. and Hirsch, H. H. and Hoffmann, M. and Hosli, I. and Kahlert, C. and Kaiser, L. and Keiser, O. and Klimkait, T. and Kouyos, R. D. and Kovari, H. and Ledergerber, B. and Martinetti, G. and de Tejada, Martinez B. and Marzolini, C. and Metzner, K. J. and Mueller, N. and Nicca, D. and Pantaleo, G. and Paioni, P. and Rauch, A. and Rudin, C. and Scherrer, A. U. and Schmid, P. and Speck, R. and Stockle, M. and Tarr, P. and Trkola, A. and Vernazza, P. and Wandeler, G. and Weber, R. and Yerly, S. and Swiss HIV Cohort Study, . (2019) Changing Trends in International Versus Domestic HCV Transmission in HIV-Positive Men Who Have Sex With Men: A Perspective for the Direct-Acting Antiviral Scale-Up Era. Journal of Infectious Diseases, 220 (1). pp. 91-99.

Bachmann, Nadine and von Braun, Amrei and Labhardt, Niklaus D. and Kadelka, Claus and Günthard, Huldrych F. and Sekaggya-Wiltshire, Christine and Castelnuovo, Barbara and Kambugu, Andrew and Lejone, Thabo I. and Böni, Jürg and Yerly, Sabine and Perreau, Matthieu and Klimkait, Thomas and Kouyos, Roger D. and Fehr, Jan and Swiss HIV Cohort Study, . (2019) Importance of routine viral load monitoring : higher levels of resistance at ART failure in Uganda and Lesotho compared with Switzerland. The journal of antimicrobial chemotherapy, 74 (2). pp. 468-472.

2018

Tomonaga, Yuki and Ten Haaf, Kevin and Frauenfelder, Thomas and Kohler, Malcolm and Kouyos, Roger D. and Shilaih, Mohaned and Lorez, Matthias and de Koning, Harry J. and Schwenkglenks, Matthias and Puhan, Milo A.. (2018) Cost-effectiveness of low-dose CT screening for lung cancer in a European country with high prevalence of smoking-A modelling study. Lung cancer (Amsterdam, Netherlands), 121. pp. 61-69.

2017

Turk, Teja and Bachmann, Nadine and Kadelka, Claus and Böni, Jürg and Yerly, Sabine and Aubert, Vincent and Klimkait, Thomas and Battegay, Manuel and Bernasconi, Enos and Calmy, Alexandra and Cavassini, Matthias and Furrer, Hansjakob and Hoffmann, Matthias and Günthard, Huldrych F. and Kouyos, Roger D. and Swiss HIV Cohort Study, . (2017) Assessing the danger of self-sustained HIV epidemics in heterosexuals by population based phylogenetic cluster analysis. eLife, 6. e28721.

2015

Yang, Wan-Lin and Kouyos, Roger D. and Scherrer, Alexandra U. and Boni, Jürg and Shah, Cyril and Yerly, Sabine and Klimkait, Thomas and Aubert, Vincent and Hirzel, Cédric and Battegay, Manuel and Cavassini, Matthias and Bernasconi, Enos and Vernazza, Pietro and Held, Leonhard and Ledergerber, Bruno and Günthard, Huldrych F. and Swiss, H. I. V. Cohort Study and Swiss, H. I. V. Cohort Study Shcs. (2015) Assessing efficacy of different nucleos(t)ide backbones in NNRTI-containing regimens in the Swiss HIV Cohort Study. Journal of Antimicrobial Chemotherapy, 70 (12). pp. 3323-3331.

Yang, Wan-Lin and Kouyos, Roger D. and Boni, Jürg and Yerly, Sabine and Klimkait, Thomas and Aubert, Vincent and Scherrer, Alexandra U. and Shilaih, Mohaned and Hinkley, Trevor and Petropoulos, Christos and Bonhoeffer, Sebastian and Gunthard, Huldrych F. and Swiss, H. I. V. Cohort Study. (2015) Persistence of transmitted HIV-1 drug resistance mutations associated with fitness costs and viral genetic backgrounds. PLoS Pathogens, 11 (3). e1004722.

2014

Kouyos, Roger D. and Rauch, Andri and Böni, Jürg and Yerly, Sabine and Shah, Cyril and Aubert, Vincent and Klimkait, Thomas and Kovari, Helen and Calmy, Alexandra and Cavassini, Matthias and Battegay, Manuel and Vernazza, Pietro L. and Bernasconi, Enos and Ledergerber, Bruno and Günthard, Huldrych F. and Swiss HIV Cohort Study, . (2014) Clustering of HCV coinfections on HIV phylogeny indicates domestic and sexual transmission of HCV. International Journal of Epidemiology, 43 (3). pp. 887-896.

Kouyos, Roger D. and Rauch, Andri and Braun, Dominique L. and Yang, Wan-Lin and Böni, Jürg and Yerly, Sabine and Klimkait, Thomas and Aubert, Vincent and Shah, Cyril and Kovari, Helen and Calmy, Alexandra and Cavassini, Matthias and Battegay, Manuel and Vernazza, Pietro L. and Bernasconi, Enos and Ledergerber, Bruno and Günthard, Huldrych F. and Swiss H. I. V. Cohort Study, . (2014) Higher risk of incident hepatitis C virus coinfection among men who have sex with men, in whom the HIV genetic bottleneck at transmission was wide. Journal of Infectious Diseases, 210 (10). pp. 1555-1561.

Hasse, Barbara and Iff, Martin and Ledergerber, Bruno and Calmy, Alexandra and Schmid, Patrick and Hauser, Christoph and Cavassini, Matthias and Bernasconi, Enos and Marzolini, Catia and Tarr, Philip E. and Swiss HIV Cohort Study, and Aubert, Vincent and Barth, J. and Battegay, Manuel and Bernasconi, E. and Böni, Jürg and Bucher, Heiner C. and Burton-Jeangros, C. and Calmy, A. and Cavassini, M. and Egger, Matthias and Elzi, L. and Fehr, J. and Fellay, Jacques and Furrer, Hansjakob and Fux, Christoph A. and Gorgievski, M. and Günthard, H. and Haerry, D. and Hasse, B. and Hirsch, Hans H. and Hösli, Irene and Kahlert, C. and Kaiser, L. and Keiser, O. and Klimkait, Thomas and Kouyos, Roger D. and Kovari, Helen and Ledergerber, B. and Martinetti, G. and Martinez de Tejada, Begona and Metzner, K. and Müller, N. and Nadal, D. and Pantaleo, G. and Rauch, Andri and Regenass, Stephan and Rickenbach, Martin and Rudin, Christoph and Schöni-Affolter, F. and Schmid, P. and Schultze, D. and Schupbach, Jörg and Speck, R. and Staehelin, C. and Tarr, P. and Telenti, Amalio and Trkola, Alexandra and Vernazza, Pietro and Weber, R. and Yerly, S.. (2014) Obesity Trends and Body Mass Index Changes After Starting Antiretroviral Treatment: The Swiss HIV Cohort Study. Open Forum Infectious Diseases, 1 (2). ofu040.

Avila, Dorita and Keiser, Olivia and Egger, Matthias and Kouyos, Roger D. and Böni, Jürg and Yerly, Sabine and Klimkait, Thomas and Vernazza, Pietro L. and Aubert, Vincent and Rauch, Andri and Bonhoeffer, Sebastian and Günthard, Huldrych F. and Stadler, Tanja and Spycher, Ben D. and Swiss HIV Cohort Study, . (2014) Social meets molecular: Combining phylogenetic and latent class analyses to understand HIV-1 transmission in Switzerland. American Journal of Epidemiology, 179 (12). pp. 1514-1525.

Drescher, Sara M. and von Wyl, Viktor and Yang, Wan-Lin and Böni, Jürg and Yerly, Sabine and Shah, Cyril and Aubert, Vincent and Klimkait, Thomas and Taffé, Patrick and Furrer, Hansjakob and Battegay, Manuel and Ambrosioni, Juan and Cavassini, Matthias and Bernasconi, Enos and Vernazza, Pietro L. and Ledergerber, Bruno and Günthard, Huldrych F. and Kouyos, Roger D. and Swiss HIV Cohort Study, . (2014) Treatment-naive individuals are the major source of transmitted HIV-1 drug resistance in men who have sex with men in the Swiss HIV Cohort Study. Clinical Infectious Diseases, 58 (2). pp. 285-294.

2011

von Wyl, Viktor and Kouyos, Roger D. and Yerly, Sabine and Böni, Jürg and Shah, Cyril and Bürgisser, Philippe and Klimkait, Thomas and Weber, Rainer and Hirschel, Bernard and Cavassini, Matthias and Staehelin, Cornelia and Battegay, Manuel and Vernazza, Pietro L. and Bernasconi, Enos and Ledergerber, Bruno and Bonhoeffer, Sebastian and Günthard, Huldrych F. and Swiss HIV Cohort Study, . (2011) The role of migration and domestic transmission in the spread of HIV-1 non-B subtypes in Switzerland. Journal of infectious diseases, Vol. 204, no. 7. pp. 1095-1103.

2010

Kouyos, Roger D. and von Wyl, Viktor and Yerly, Sabine and Böni, Jürg and Taffé, Patrick and Shah, Cyril and Bürgisser, Philippe and Klimkait, Thomas and Weber, Rainer and Hirschel, Bernard and Cavassini, Matthias and Furrer, Hansjakob and Battegay, Manuel and Vernazza, Pietro L. and Bernasconi, Enos and Rickenbach, Martin and Ledergerber, Bruno and Bonhoeffer, Sebastian and Günthard, Huldrych F.. (2010) Molecular epidemiology reveals long-term changes in HIV type 1 subtype B transmission in Switzerland. Journal of infectious diseases, Vol. 201, no. 10. pp. 1488-1497.