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Items where Author is "Castaño-Díez, Daniel"

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Number of items: 18.

2019

Syntychaki, Anastasia and Rima, Luca and Schmidli, Claudio and Stohler, Thomas and Bieri, Andrej and Sütterlin, Rosmarie and Stahlberg, Henning and Castaño-Díez, Daniel and Braun, Thomas. (2019) "Differential Visual Proteomics": Enabling the Proteome-Wide Comparison of Protein Structures of Single-Cells. Journal of proteome research, 18 (9). pp. 3521-3531.

Castaño-Díez, Daniel and Zanetti, Giulia. (2019) In situ structure determination by subtomogram averaging. Current Opinion in Structural Biology, 58. pp. 68-75.

Shahmoradian, Sarah H. and Lewis, Amanda J. and Genoud, Christel and Hench, Jürgen and Moors, Tim E. and Navarro, Paula P. and Castaño-Díez, Daniel and Schweighauser, Gabriel and Graff-Meyer, Alexandra and Goldie, Kenneth N. and Sütterlin, Rosmarie and Huisman, Evelien and Ingrassia, Angela and de Gier, Yvonne and Rozemuller, Annemieke J. M. and Wang, Jing and De Paepe, Anne and Erny, Johannes and Staempfli, Andreas and Hoernschemeyer, Joerg and Großerüschkamp, Frederik and Niedieker, Daniel and El-Mashtoly, Samir F. and Quadri, Marialuisa and Van IJcken, Wilfred F. J. and Bonifati, Vincenzo and Gerwert, Klaus and Bohrmann, Bernd and Frank, Stephan and Britschgi, Markus and Stahlberg, Henning and Van de Berg, Wilma D. J. and Lauer, Matthias E.. (2019) Lewy pathology in Parkinson's disease consists of crowded organelles and lipid membranes. Nature Neuroscience, 22 (7). pp. 1099-1109.

Irastorza-Azcarate, Ibai and Castaño-Díez, Daniel and Devos, Damien and Gallego, Oriol. (2019) Live-cell structural biology to solve biological mechanisms: the case of the exocyst. Structure, 27 (6). pp. 886-892.

2018

Navarro, Paula P. and Genoud, Christel and Castaño-Díez, Daniel and Graff-Meyer, Alexandra and Lewis, Amanda J. and de Gier, Yvonne and Lauer, Matthias E. and Britschgi, Markus and Bohrmann, Bernd and Frank, Stephan and Hench, Jürgen and Schweighauser, Gabriel and Rozemuller, Annemieke J. M. and van de Berg, Wilma D. J. and Stahlberg, Henning and Shahmoradian, Sarah H.. (2018) Cerebral Corpora amylacea are dense membranous labyrinths containing structurally preserved cell organelles. Scientific reports, 8 (1). p. 18046.

Navarro, Paula P. and Stahlberg, Henning and Castaño-Díez, Daniel. (2018) Protocols for Subtomogram Averaging of Membrane Proteins in the Dynamo Software Package. Frontiers in Molecular Biosciences, 5. p. 82.

2017

Wang, Jing and Brackmann, Maximilian and Castaño-Díez, Daniel and Kudryashev, Mikhail and Goldie, Kenneth N. and Maier, Timm and Stahlberg, Henning and Basler, Marek. (2017) Cryo-EM structure of the extended type VI secretion system sheath-tube complex. Nature Microbiology, 2 (11). pp. 1507-1512.

Ertel, Kenneth J. and Benefield, Desiree and Castaño-Díez, Daniel and Pennington, Janice G. and Horswill, Mark and den Boon, Johan A. and Otegui, Marisa S. and Ahlquist, Paul . (2017) Cryo-electron tomography reveals novel features of a viral RNA replication compartment. eLife, 6. e25940.

Castaño-Díez, Daniel and Kudryashev, Mikhail and Stahlberg, Henning. (2017) Dynamo Catalogue: Geometrical tools and data management for particle picking in subtomogram averaging of cryo-electron tomograms. Journal of Structural Biology, 197 (2). pp. 135-144.

Castaño-Díez, Daniel. (2017) The Dynamo package for tomography and subtomogram averaging: components for MATLAB, GPU computing and EC2 Amazon Web Services. Acta Crystallographica Section D, 73 (6). pp. 478-487.

5 January 2016

Kudryashev, Mikhail and Castaño-Díez, Daniel and Deluz, Cédric and Hassaine, Gherici and Grasso, Luigino and Graf-Meyer, Alexandra and Vogel, Horst and Stahlberg, Henning. (2016) The Structure of the Mouse Serotonin 5-HT3 Receptor in Lipid Vesicles. Structure, 24 (1). pp. 165-170.

2013

Arheit, Marcel and Castaño-Díez, Daniel and Thierry, Raphaël and Gipson, Bryant R. and Zeng, Xiangyan and Stahlberg, Henning. (2013) Automation of image processing in electron crystallography. Methods in Molecular Biology, 955. pp. 313-330.

Arheit, Marcel and Castaño-Díez, Daniel and Thierry, Raphaël and Gipson, Bryant R. and Zeng, Xiangyan and Stahlberg, Henning. (2013) Image Processing of 2D Crystal Images. Methods in Molecular Biology, 955. pp. 171-194.

Kudryashev, Mikhail and Stenta, Marco and Schmelz, Stefan and Amstutz, Marlise and Wiesand, Ulrich and Castaño-Díez, Daniel and Degiacomi, Matteo T. and Münnich, Stefan and Bleck, Christopher Ke and Kowal, Julia and Diepold, Andreas and Heinz, Dirk W. and Dal Peraro, Matteo and Cornelis, Guy R. and Stahlberg, Henning. (2013) In situ structure of the Yersinia enterocolitica injectisome. eLife, Vol. 2 , e00792.

Kowal, Julia and Chami, Mohamed and Ringler, Philippe and Müller, Shirley A. and Kudryashev, Mikhail and Castaño-Díez, Daniel and Amstutz, Marlise and Cornelis, Guy R. and Stahlberg, Henning and Engel, Andreas. (2013) Structure of the Dodecameric Yersinia enterocolitica Secretin YscC and Its Trypsin-Resistant Core. Structure, 21 (12). pp. 2152-2161.

2012

Kudryashev, Mikhail and Stahlberg, Henning and Castaño-Díez, Daniel. (2012) Assessing the benefits of focal pair cryo-electron tomography. Journal of structural biology, Vol. 178, H. 2. pp. 88-97.

Kudryashev, Mikhail and Castaño-Díez, Daniel and Stahlberg, Henning. (2012) Limiting factors in single particle cryo electron tomography. Computational and structural biotechnology journal, Vol. 1, H. 1 , e201207002.

2010

Schenk, Andreas D. and Castaño-Díez, Daniel and Gipson, Bryant and Arheit, Marcel and Zeng, Xiangyan and Stahlberg, Henning. (2010) 3D reconstruction from 2D crystal image and diffraction data. Methods in enzymology, Vol. 482. pp. 101-129.

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