Items where Author is "Bedford, Trevor"
Number of items: 15. 2022Happi, Christian and Adetifa, Ifedayo and Mbala, Placide and Njouom, Richard and Nakoune, Emmanuel and Happi, Anise and Ndodo, Nnaemeka and Ayansola, Oyeronke and Mboowa, Gerald and Bedford, Trevor and Neher, Richard A. and Roemer, Cornelius and Hodcroft, Emma and Tegally, Houriiyah and O'Toole, Áine and Rambaut, Andrew and Pybus, Oliver and Kraemer, Moritz U. G. and Wilkinson, Eduan and Isidro, Joana and Borges, Vítor and Pinto, Miguel and Gomes, João Paulo and Freitas, Lucas and Resende, Paola C. and Lee, Raphael T. C. and Maurer-Stroh, Sebastian and Baxter, Cheryl and Lessells, Richard and Ogwell, Ahmed E. and Kebede, Yenew and Tessema, Sofonias K. and de Oliveira, Tulio. (2022) Urgent need for a non-discriminatory and non-stigmatizing nomenclature for monkeypox virus. PLoS Biology, 20 (8). e3001769. 2021Huddleston, John and Hadfield, James and Sibley, Thomas R. and Lee, Jover and Fay, Kairsten and Ilcisin, Misja and Harkins, Elias and Bedford, Trevor and Neher, Richard A. and Hodcroft, Emma B.. (2021) Augur: a bioinformatics toolkit for phylogenetic analyses of human pathogens. Journal of Open Source Software, 6 (57). p. 4. Barrat-Charlaix, Pierre and Huddleston, John and Bedford, Trevor and Neher, Richard A.. (2021) Limited Predictability of Amino Acid Substitutions in Seasonal Influenza Viruses. Molecular Biology and Evolution , 38 (7). pp. 2767-2777. Konings, Frank and Perkins, Mark D. and Kuhn, Jens H. and Pallen, Mark J. and Alm, Erik J. and Archer, Brett N. and Barakat, Amal and Bedford, Trevor and Bhiman, Jinal N. and Caly, Leon and Carter, Lisa L. and Cullinane, Anne and de Oliveira, Tulio and Druce, Julian and El Masry, Ihab and Evans, Roger and Gao, George F. and Gorbalenya, Alexander E. and Hamblion, Esther and Herring, Belinda L. and Hodcroft, Emma and Holmes, Edward C. and Kakkar, Manish and Khare, Shagun and Koopmans, Marion P. G. and Korber, Bette and Leite, Juliana and MacCannell, Duncan and Marklewitz, Marco and Maurer-Stroh, Sebastian and Rico, Jairo Andres Mendez and Munster, Vincent J. and Neher, Richard and Munnink, Bas Oude and Pavlin, Boris I. and Peiris, Malik and Poon, Leo and Pybus, Oliver and Rambaut, Andrew and Resende, Paola and Subissi, Lorenzo and Thiel, Volker and Tong, Suxiang and van der Werf, Sylvie and von Gottberg, Anne and Ziebuhr, John and Van Kerkhove, Maria D.. (2021) SARS-CoV-2 Variants of Interest and Concern naming scheme conducive for global discourse. Nature Microbiology, 6 (7). pp. 821-823. 2020Müller, Nicola F. and Wüthrich, Daniel and Goldman, Nina and Sailer, Nadine and Saalfrank, Claudia and Brunner, Myrta and Augustin, Noémi and Seth-Smith, Helena Mb and Hollenstein, Yvonne and Syedbasha, Mohammedyaseen and Lang, Daniela and Neher, Richard A. and Dubuis, Olivier and Naegele, Michael and Buser, Andreas and Nickel, Christian H. and Ritz, Nicole and Zeller, Andreas and Lang, Brian M. and Hadfield, James and Bedford, Trevor and Battegay, Manuel and Schneider-Sliwa, Rita and Egli, Adrian and Stadler, Tanja. (2020) Characterising the epidemic spread of influenza A/H3N2 within a city through phylogenetics. PLoS Pathogens, 16 (11). e1008984. Bedford, Trevor and Greninger, Alexander L. and Roychoudhury, Pavitra and Starita, Lea M. and Famulare, Michael and Huang, Meei-Li and Nalla, Arun and Pepper, Gregory and Reinhardt, Adam and Xie, Hong and Shrestha, Lasata and Nguyen, Truong N. and Adler, Amanda and Brandstetter, Elisabeth and Cho, Shari and Giroux, Danielle and Han, Peter D. and Fay, Kairsten and Frazar, Chris D. and Ilcisin, Misja and Lacombe, Kirsten and Lee, Jover and Kiavand, Anahita and Richardson, Matthew and Sibley, Thomas R. and Truong, Melissa and Wolf, Caitlin R. and Nickerson, Deborah A. and Rieder, Mark J. and Englund, Janet A. and Seattle Flu Study Investigators, and Hadfield, James and Hodcroft, Emma B. and Huddleston, John and Moncla, Louise H. and Müller, Nicola F. and Neher, Richard A. and Deng, Xianding and Gu, Wei and Federman, Scot and Chiu, Charles and Duchin, Jeffrey S. and Gautom, Romesh and Melly, Geoff and Hiatt, Brian and Dykema, Philip and Lindquist, Scott and Queen, Krista and Tao, Ying and Uehara, Anna and Tong, Suxiang and MacCannell, Duncan and Armstrong, Gregory L. and Baird, Geoffrey S. and Chu, Helen Y. and Shendure, Jay and Jerome, Keith R.. (2020) Cryptic transmission of SARS-CoV-2 in Washington state. Science, 370 (6516). pp. 571-575. Huddleston, John and Barnes, John R. and Rowe, Thomas and Xu, Xiyan and Kondor, Rebecca and Wentworth, David E. and Whittaker, Lynne and Ermetal, Burcu and Daniels, Rodney Stuart and McCauley, John W. and Fujisaki, Seiichiro and Nakamura, Kazuya and Kishida, Noriko and Watanabe, Shinji and Hasegawa, Hideki and Barr, Ian and Subbarao, Kanta and Barrat-Charlaix, Pierre and Neher, Richard A. and Bedford, Trevor. (2020) Integrating genotypes and phenotypes improves long-term forecasts of seasonal influenza A/H3N2 evolution. eLife, 9. e60067. 2019Potter, Barney I. and Kondor, Rebecca and Hadfield, James and Huddleston, John and Barnes, John and Rowe, Thomas and Guo, Lizheng and Xu, Xiyan and Neher, Richard A. and Bedford, Trevor and Wentworth, David E.. (2019) Evolution and rapid spread of a reassortant A(H3N2) virus that predominated the 2017-2018 influenza season. Virus Evolution, 5 (2). vez046. Potter, Barney I. and Kondor, Rebecca and Hadfield, James and Huddleston, John and Barnes, John and Rowe, Thomas and Guo, Lizheng and Xu, Xiyan and Neher, Richard A. and Bedford, Trevor and Wentworth, David E.. (2019) Evolution and rapid spread of a reassortant A(H3N2) virus that predominated the 2017-2018 influenza season. Virus Evolution, 5 (2). vez046. 2018Hadfield, James and Megill, Colin and Bell, Sidney M. and Huddleston, John and Potter, Barney and Callender, Charlton and Sagulenko, Pavel and Bedford, Trevor and Neher, Richard A.. (2018) Nextstrain: real-time tracking of pathogen evolution. Bioinformatics, 34 (23). pp. 4121-4123. Neher, Richard A. and Bedford, Trevor. (2018) Real-time analysis and visualization of pathogen sequence data. Journal of clinical microbiology, 56 (11, ). e00480-18. 2017Morris, Dylan H. and Gostic, Katelyn M. and Pompei, Simone and Bedford, Trevor and Łuksza, Marta and Neher, Richard A. and Grenfell, Bryan T. and Lässig, Michael and McCauley, John W.. (2017) Predictive Modeling of Influenza Shows the Promise of Applied Evolutionary Biology. Trends in Microbiology, 26 (2). p. 17. 2016Neher, Richard A. and Bedford, Trevor and Daniels, Rodney S. and Russell, Colin A. and Shraiman, Boris I.. (2016) Prediction, dynamics, and visualization of antigenic phenotypes of seasonal influenza viruses. Proceedings of the National Academy of Sciences of the United States of America, 113 (12). pp. 1701-1709. 2015Neafsey, Daniel E. and Juraska, Michal and Bedford, Trevor and Benkeser, David and Valim, Clarissa and Griggs, Allison and Lievens, Marc and Abdulla, Salim and Adjei, Samuel and Agbenyega, Tsiri and Agnandji, Selidji T. and Aide, Pedro and Anderson, Scott and Ansong, Daniel and Aponte, John J. and Asante, Kwaku Poku and Bejon, Philip and Birkett, Ashley J. and Bruls, Myriam and Connolly, Kristen M. and D'Alessandro, Umberto and Dobaño, Carlota and Gesase, Samwel and Greenwood, Brian and Grimsby, Jonna and Tinto, Halidou and Hamel, Mary J. and Hoffman, Irving and Kamthunzi, Portia and Kariuki, Simon and Kremsner, Peter G. and Leach, Amanda and Lell, Bertrand and Lennon, Niall J. and Lusingu, John and Marsh, Kevin and Martinson, Francis and Molel, Jackson T. and Moss, Eli L. and Njuguna, Patricia and Ockenhouse, Christian F. and Ogutu, Bernhards Ragama and Otieno, Walter and Otieno, Lucas and Otieno, Kephas and Owusu-Agyei, Seth and Park, Daniel J. and Pellé, Karell and Robbins, Dana and Russ, Carsten and Ryan, Elizabeth M. and Sacarlal, Jahit and Sogoloff, Brian and Sorgho, Hermann and Tanner, Marcel and Theander, Thor and Valea, Innocent and Volkman, Sarah K. and Yu, Qing and Lapierre, Didier and Birren, Bruce W. and Gilbert, Peter B. and Wirth, Dyann F.. (2015) Genetic diversity and protective efficacy of the RTS,S/AS01 malaria vaccine. The New England journal of medicine, 373 (21). pp. 2025-2037. Neher, Richard A. and Bedford, Trevor. (2015) nextflu: real-time tracking of seasonal influenza virus evolution in humans. Bioinformatics, 31 (21). pp. 3546-3548. |
