Items where Author is "Aebi, U."
Jump to: Article | Book Section Number of items: 82. ArticlePlodinec, M. and Loparic, M. and Monnier, C. A. and Obermann, E. C. and Zanetti-Dallenbach, R. and Oertle, P. and Hyotyla, J. T. and Aebi, U. and Bentires-Alj, M. and Lim, R. Y. H. and Schoenenberger, C. -A.. (2012) The nanomechanical signature of breast cancer. Nature nanotechnology, Vol. 7, H. 11. pp. 757-765. Goldsbury, C. and Baxa, U. and Simon, M. N. and Steven, A. C. and Engel, A. and Wall, J. S. and Aebi, U. and Muller, S. A.. (2011) Amyloid structure and assembly : insights from scanning transmission electron microscopy. Journal of structural biology, Vol. 173, H. 11-13. pp. 1-13. Kapinos, L. E. and Burkhard, P. and Herrmann, H. and Aebi, U. and Strelkov, S. V.. (2011) Simultaneous formation of right- and left-handed anti-parallel coiled-coil interfaces by a coil2 fragment of human lamin A. Journal of molecular biology, Vol. 408, H. 1. pp. 135-146. Plodinec, M. and Loparic, M. and Sütterlin, R. and Herrmann, H. and Aebi, U. and Schoenenberger, C.-A.. (2011) The nanomechanical properties of rat fibroblasts are modulated by interfering with the vimentin intermediate filament system. Journal of structural biology, Vol. 174, H. 3. pp. 476-484. Machaidze, G. and Sokoll, A. and Shimada, A. and Lustig, A. and Mazur, A. and Wittinghofer, A. and Aebi, U. and Mannherz, H. G.. (2010) Actin filament bundling and different nucleating effects of mouse Diaphanous-related formin FH2 domains on actin/ADF and actin/cofilin complexes. Journal of molecular biology, Vol. 403, H. 4. pp. 529-545. Kapinos, L. E. and Schumacher, J. and Mucke, N. and Machaidze, G. and Burkhard, P. and Aebi, U. and Strelkov, S. V. and Herrmann, H.. (2010) Characterization of the head-to-tail overlap complexes formed by human lamin A, B1 and B2 "half-minilamin" dimers. Journal of molecular biology, Vol. 396, H. 3. pp. 719-731. Loparic, M. and Wirz, D. and Daniels, A. U. and Raiteri, R. and Vanlandingham, M. R. and Guex, G. and Martin, I. and Aebi, U. and Stolz, M.. (2010) Micro- and nanomechanical analysis of articular cartilage by indentation-type atomic force microscopy: validation with a gel-microfiber composite. Biophysical journal, Vol. 98. pp. 2731-2740. Haas, P. and Then, P. and Wild, A. and Grange, W. and Zorman, S. and Hegner, M. and Calame, M. and Aebi, U. and Flammer, J. and Hecht, B.. (2010) Quantitative Single-Molecule Detection at Ultralow Concentrations. Analytical chemistry, Vol. 82, H. 14 , S. 6299–6302. Huang, N. P. and Stubenrauch, M. and Koser, J. and Taschner, N. and Aebi, U. and Stolz, M.. (2010) Towards monitoring transport of single cargos across individual nuclear pore complexes by time-lapse atomic force microscopy. Journal of structural biology, Vol. 171, H. 2. pp. 154-162. Kaba, S. A. and Brando, C. and Guo, Q. and Mittelholzer, C. and Raman, S. and Trope, D. and Aebi, U. and Burkhard, P. and Lanar, D. E.. (2009) A Non-Adjuvanted Polypeptide Nanoparticle Vaccine Confers Long-Lasting Protection Against Rodent Malaria. Journal of immunology, Vol. 183, no. 11. pp. 7268-7277. Herrmann, H. and Strelkov, S. V. and Burkhard, P. and Aebi, U.. (2009) Intermediate filaments : primary determinants of cell architecture and plasticity. Journal of Clinical Investigation, Vol. 119, H. 7. pp. 1772-1783. Schroeder, U. and Graff, A. and Buchmeier, S. and Rigler, P. and Tropel, D. and Jockusch, B. and Aebi, U. and Burkhard, P. and Schoenenberger, C. -A.. (2009) Peptide Nanoparticles Serve as a Powerful Platform for the Immunogenic Display of Poorly Antigenic Actin Determinants. Journal of molecular biology, Vol. 386, H. Mar 13. pp. 1368-1381. Schroeder, U. and Graff, A. and Buchmeieer, S. and Rigler, P. and Silvan, U. and Tropel, D. and Jockusch, B. and Aebi, U. and Burckhard, P. and Schoenenberger, C. A.. (2009) Peptide nanoparticles serve as apowerful platform for the immunogenic display of poorly antigenic actin determinants. Journal of molecular biology, Vol. 386, H. 5. pp. 1368-1381. Frenkiel-Krispin, D. and Mako, B. and Aebi, U. and Medalia, O.. (2009) Structural Analysis of a Metazoan Nuclear Pore Complex Reveals of Fused Concentric Ring Architecture. Journal of molecular biology, Vol. 395. pp. 578-586. Ben-Harush, K. and Wiesel, N. and Frenkiel-Krispin, D. and Moeller, D. and Soreq, E. and Aebi, U. and Herrmann, H. and Gruenbaum, Y. and Medalia, O.. (2009) The supramolecular organization of the C. elegans nuclear lamin filament. Journal of molecular biology, Vol. 386, H. 5. pp. 1392-1402. Huang, N. -P. and Stubenrauch, M. and Koeser, J. and Strasser, P. and Taschner, N. and Aebi, U. and Stolz, M.. (2009) Towards Watching the Nuclear Pore Complex (NPC) at Work : In Situ Binding of Gold-Conjugated Cargoes to the Nucleoporins Monitored by Time-Lapse Scanning Force Microscopy. Journal of structural biology, Vol. 171, H. 2. pp. 154-162. Meier, M. and Padilla, G. P. and Herrmann, H. and Wedig, T. and Hergt, M. and Patel, T. R. and Stetefeld, J. and Aebi, U. and Burkhard, P.. (2009) Vimentin Coil 1A : a molecular switch involved in the initiation of filament elongation. Journal of molecular biology, Vol. 390. pp. 245-261. Wiesel, N. and Mattout, A. and Melcer, S. and Melamed-Book, N. and Herrmann, H. and Medalia, O. and Aebi, U. and Gruenbaum, Y.. (2008) Laminopathic mutations interfere with the assembly, localization, and dynamics of nuclear lamins. Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, H. 1. pp. 180-185. Georgakopoulou, S. and Wedig, T. and Sachs, N. and Herrmann, H. and Aebi, U.. (2008) Structural transitions during the assembly of vimentin intermediate filaments by near-UV circular dichroism. The FEBS journal, Vol. 275. p. 164. Kreplak, L. and Herrmann, H. and Aebi, U.. (2008) Tensile properties of single desmin intermediate filaments. Biophysical journal, Vol. 94, H. 7. pp. 2790-2799. Shumaker, D. K. and Solimando, L. and Sengupta, K. and Shimi, T. and Adam, S. A. and Grunwald, A. and Strelkov, S. V. and Aebi, U. and Cardoso, M. C. and Goldman, R. D.. (2008) The highly conserved nuclear lamin Ig-fold binds to PCNA : its role in DNA replication. The Journal of cell biology, Vol. 181, H. 2. pp. 269-280. Lim, R. Y. H. and Fahrenkrog, B. and Deng, J. and Kapinos, L. and Koeser, J. and Aebi, U.. (2008) Tinkering with a cellular nanomachine by a minimalist approach. The FEBS journal, Vol. 275. p. 7. Rowat, A. C. and Lammerding, J. and Herrmann, H. and Aebi, U.. (2008) Towards an integrated understanding of the structure and mechanics of the cell nucleus. Bioessays, Vol. 30, H. 3. pp. 226-236. Muller, S. A. and Aebi, U. and Engel, A.. (2008) What transmission electron microscopes can visualize now and in the future. Journal of structural biology, Vol. 163, H. 3. pp. 235-245. Kirmse, R. and Portet, S. and Mucke, N. and Aebi, U. and Herrmann, H. and Langowski, J.. (2007) A Quantitative Kinetic Model for the in Vitro Assembly of Intermediate Filaments from Tetrameric Vimentin. Journal of biological chemistry, Vol. 282. pp. 18563-18572. Baer, H. and Muecke, N. and Katus, H. A. and Aebi, U. and Herrmann, H.. (2007) Assembly Defects of Desmin Disease Mutants Carrying Deletions in the a-helical Rod Domain Are Rescued by Wild-Type Protein. Journal of Structural Biology, Vol. 158, H. 1. pp. 107-115. Kreplak, L. and Wang, H. and Aebi, U. and Kong, X. -P.. (2007) Atomic force microscopy of Mammalian urothelial surface. Journal of molecular biology, Vol. 374, H. 2. pp. 365-373. Stolz, M. and Aebi, U. and Stoffler, D.. (2007) Developing scanning probe-based nanodevices--stepping out of the laboratory into the clinic. Nanomedicine, Vol. 3, H. 1. pp. 53-62. Goldie, K. M. and Wedig, T. and Mitra, A. and Aebi, U. and Herrmann, H. and Hoenger, A.. (2007) Dissecting the 3-D Structure of vimentin Intermediate Filaments by Cro-Electron Tomography. Journal of Structural Biology, Vol. 158, H. 3. pp. 378-385. Imer, R. and AQkiyama, T. and De Rooij, N. F. and Stolz, M. and Aebi, U. and Kilger, R. and Friederich, N. F. and Wirz, D. and Daniels, A. U. and Staufer, U.. (2007) In Situ Measurements of Human Articular Cartilage Stiffness by Means of a Scanning Force Microscope. Journal of physics. Conference series, Vol. 61. pp. 467-471. Parry, D. A. D. and strelkov, S. and Burkhard, P. and Aebi, U. and Herrmann, H.. (2007) Intermediate Filaments : Towards a Molecular Description of the Assembly Process and their Structure. Experimental cell research, Vol. 313, H. 10. pp. 2204-2216. Herrmann, H. and Baer, H. and Kreplak, L. and Strelkov, S. and Aebi, U.. (2007) Intermediate Filaments: from Cell Architecture to Nanomechanics. Nature reviews. Molecular cell biology, Vol. 8. pp. 562-573. Staufer, U. and Akiyama, T. and Gullo, M. R. and Han, A. and Imer, R. and de Rooij, N. F. and Aebi, U. and Engel, A. and Frederix, P. L. T. M. and Stolz, M. and Friederich, N. F. and Wirz, D.. (2007) Micro- and Nanosystems for Biology and Medicine. Microelectronic engineering, Vol. 84. pp. 1681-1684. Lim, R. Y. H. and Fahrenkrog, B. and Koser, J. and Schwarz-Herion, K. and Deng, J. and Aebi, U.. (2007) Nanomechanical basis of selective gating by the nuclear pore complex. Science, Vol. 318, no. 5850. pp. 640-643. Lim, R. Y. H. and Koser, J. and Huang, N. -P. and Schwarz-Herion, K. and Aebi, U.. (2007) Nanomechanical interactions of phenylalanine-glycine nucleoporins studied by single molecule force-volume spectroscopy. Journal of Structural Biology, Vol. 159, H. 2. pp. 277-289. Foisner, R. and Aebi, U. and Bonne, G. and Gruenbaum, Y. and Novelli, G.. (2007) Nuclear Envelope-linked Rare Human Deseases : From Molecular Pathophysiology towards Clinical Applications. Neuromuscular Disorders, Vol. 17. pp. 655-660. Imer, R. and Akiyama, T. and De Rooij, N. F. and Stolz, M. and Aebi, U. and Friederich, N. F. and Koenig, U. and Wirz, D. and Daniels, A. U. and Staufer, U.. (2006) Development of an Atomic Force Microscope for Arthoscopic Knee Cartilage Inspection. Japanese journal of applied physics. Part 1, Regular papers, short notes & review papers, Vol. 45. pp. 2319-2323. Guzman, C. and Jeney, S. and Kreplak, L. and Kasas, S. and Kulik, A. J. and Aebi, U. and Forro, L.. (2006) Exploring the Mechanical Properties of Single Vimentin Intermediate Filaments by Atomic Force Microscopy. Journal of molecular biology, Vol. 360. pp. 623-630. Kreplak, L. and Aebi, U.. (2006) From the polymorphism of amyloid fibrils to their assembly mechanism and cytotoxicity. Advances in Protein Chemistry, Vol. 73. pp. 217-233. Lim, R. Y. H. and Aebi, U. and Stoffler, D.. (2006) From the trap to the basket : getting to the bottom of the nuclear pore complex. Chromosoma, Vol. 115, H. 1. pp. 15-26. Lim, R. Y. H. and Aebi, U. and Stoffler, D.. (2006) From the trap to the basket : getting to the bottom of the nuclear pore complex. Chromosoma, Vol. 115, H. 1. pp. 15-26. Stoffler, D. and Schwarz-Herion, K. and Aebi, U. and Fahrenkrog, B.. (2006) Getting across the nuclear pore complex : new insights into nucleocytoplasmic transport. Canadian Journal of Physiology and Pharmacology, Vol. 84, H. 3-4. pp. 499-507. Sokolova, A. and Kreplak, L. and Svergun, D. J. and Herrmann, H. and Aebi, U. and Strelkov, S. V.. (2006) Monitoring Intermediate Filament Assembly with Small-angle X-ray Scattering Reveals the Molecular Architecture of Assembly Intermediates. Proceedings of the National Academy of Sciences of the United States of America, Vol. 103. pp. 16206-16211. Schaefer, T. and Maco, B. and Petgalski, E. and Tollervey, D. and Boettcher, B. and Aebi, U. and Hurt, E.. (2006) Phosphorylation by Casein KInase 1 Isoform Hrr25 and Subsequent Dephosphorylation Regulate the Structural Reorganization of the 40S Subunit During Ribosome Biogenesis. Nature, Vol. 441. pp. 651-655. Lill, Y. and Hecht, B. and Lill, M. A. and Fahrenkrog, B. and Schwarz-Herion, K. and Paulillo, S. and Aebi, U.. (2006) Single Hepatitis-B Virus Core Capsid Binding to Individual Nuclear Pore Complexes in HeLa Cells. Biophysical journal, Vol. 91, H. 8. pp. 3123-3130. Foeger, N. and Wiesel, N. and Muecke, N. and Lotsch, D. and Kreplak, L. and Aebi, U. and Gruenbaum, Y. and Herrmann, H.. (2006) Solubility Properties and Specific Assembly Pathways of the B-type Lamin from Caenorhabditis elegans. Journal of structural biology, Vol. 155, H. 2. pp. 340-350. Raman, S. and Machaidze, G. and Lustig, A. and Aebi, U. and Burkhard, P.. (2006) Structure-based design of peptides that self-assemble into regular polyhedral nanoparticles. Nanomedicine, Vol. 2, H. 2. pp. 95-102. Von Bergen, M. and Barghorn, S. and Mueller, S. S. and Pickhardt, M. and Biernat, J. and Mandelkow, E. -M. and Davis, P. and Aebi, U. and Mandelkow, E.. (2006) The core of tau-paired helical filaments studied by scanning transmission electron microscopy and limited proteolysis. Biochemistry, Vol. 45, H. 20. pp. 6446-6457. Jockusch, B. M. and Schoenenberger, C. A. and Stetefeld, J. and Aebi, U.. (2006) Tracking down the different forms of nuclear actin. Trends in cell biology, Vol. 16, H. 8. pp. 391-396. Schoenenberger, C. -A. and Buchmeier, S. and Boerries, M. and Sutterlin, R. and Aebi, U. and Jockusch, B. M.. (2005) Conformation-specific antibodies reveal distinct actin structures in the nucleus and the cytoplasm. Journal of Structural Biology, Vol. 152, H. 3. pp. 157-168. Lim, R. Y. H. and Aebi, U.. (2005) In silico access to the nuclear pore complex. Structure: with folding and design, Vol. 13, H. 12. pp. 1741-1743. Green, J. D. and Kreplak, L. and Goldsbury, C. and Li Blatter, X. and Stolz, M. and Cooper, G. S. and Seelig, A. and Kistler, J. and Aebi, U.. (2004) Atomic force microscopy reveals defects within mica supported lipid bilayers induced by the amyloidogenic human amylin peptide. Journal of molecular biology, Vol. 342, H. 3. pp. 877-887. Strelkov, S. V. and Schumacher, J. and Burkhard, P. and Aebi, U. and Herrmann, H.. (2004) Crystal structure of the human lamin A coil 2B dimer: implications for the head-to-tail association of nuclear lamins. Journal of molecular biology, Vol. 343, H. 4. pp. 1067-1080. Fahrenkrog, B. and Sauder, U. and Aebi, U.. (2004) The S. cerevisiae HtrA-like protein Nma111p is a nuclear serine protease that mediates yeast apoptosis. Journal of cell science, Vol. 117, H. 1. pp. 115-126. Fahrenkrog, B. and Koser, J. and Aebi, U.. (2004) The nuclear pore complex : a jack of all trades? Trends in biochemical sciences, Vol. 29, H. 4. pp. 175-182. Stoffler, D. and Feja, B. and Fahrenkrog, B. and Walz, J. and Typke, D. and Aebi, U.. (2003) Cryo-electron tomography provides novel insights into nuclear pore architecture : implications for nucleocytoplasmic transport. Journal of molecular biology, Vol. 328, H. 1. pp. 119-130. Fahrenkrog, B. and Aebi, U.. (2003) The nuclear pore complex : nucleocytoplasmic transport and beyond. Nature reviews. Molecular cell biology, Vol. 4, H. 10. pp. 757-766. Schoenenberger, C. -A. and Bischler, N. and Fahrenkrog, B. and Aebi, U.. (2002) Actin's propensity for dynamic filament patterning. FEBS letters, Vol. 529, H. 1. pp. 27-33. Strelkov, S. V. and Herrmann, H. and Geisler, N. and Wedig, T. and Zimbelmann, R. and Aebi, U. and Burkhard, P.. (2002) Conserved segments 1A and 2B of the intermediate filament dimer: their atomic structures and role in filament assembly. The EMBO journal, Vol. 21, H. 6. pp. 1255-1266. Fahrenkrog, B. and Maco, B. and Fager, A. M. and Koser, J. and Sauder, U. and Ullman, K. S. and Aebi, U.. (2002) Domain-specific antibodies reveal multiple-site topology of Nup153 within the nuclear pore complex. Journal of Structural Biology, Vol. 140, H. 1/3. pp. 254-267. Heitlinger, E. and Peter, M. and Lustig, A. and Villiger, W. and Nigg, E. A. and Aebi, U.. (2002) The role of the head and tail domain in lamin structure and assembly : analysis of bacterially expressed chicken lamin A and truncated B2 lamins. Journal of structural biology, Vol. 108, H. 1. pp. 74-89. Strelkov, S. V. and Herrmann, H. and Geisler, N. and Lustig, A. and Ivaninskii, S. and Zimbelmann, R. and Burkhard, P. and Aebi, U.. (2001) Divide-and-conquer crystallographic approach towards an atomic structure of intermediate filaments. Journal of molecular biology, Vol. 306, H. 4. pp. 773-781. Fahrenkrog, B. and Stoffler, D. and Aebi, U.. (2001) Nuclear pore complex architecture and functional dynamics. Current topics in microbiology and immunology, 259. pp. 95-117. Steinmetz, M. O. and Hoenger, A. and Stoffler, D. and Noegel, A. A. and Aebi, U. and Schoenenberger, C. A.. (2000) Polymerization, three-dimensional structure and mechanical properties of Ddictyostelium versus rabbit muscle actin filaments. Journal of molecular biology, Vol. 303, H. 2. pp. 171-184. Burkhard, P. and Kammerer, R. A. and Steinmetz, M. O. and Bourenkov, G. P. and Aebi, U.. (2000) The coiled-coil trigger site of the rod domain of cortexillin I unveils a distinct network of interhelical and intrahelical salt bridges. Structure: with folding and design, Vol. 8, H. 3. pp. 223-230. Fahrenkrog, B. and Hubner, W. and Mandinova, A. and Pante, N. and Keller, W. and Aebi, U.. (2000) The yeast nucleoporin Nup53p specifically interacts with Nic96p and is directly involved in nuclear protein import. Molecular and Cellular Biology, 11 (11). pp. 3885-3896. Brault, V. and Sauder, U. and Reedy, M. C. and Aebi, U. and Schoenenberger, C. A.. (1999) Differential epitope tagging of actin in transformed Drosophila produces distinct effects on myofibril assembly and function of the indirect flight muscle. Molecular Biology of the Cell, 10 (1). pp. 135-149. Schoenenberger, C. A. and Steinmetz, M. O. and Stoffler, D. and Mandinova, A. and Aebi, U.. (1999) Structure, assembly, and dynamics of actin filaments in situ and in vitro. Microscopy research and technique, Vol. 47, H. 1. pp. 38-50. Brault, V. and Reedy, M. C. and Sauder, U. and Kammerer, R. A. and Aebi, U. and Schoenenberger, C.. (1999) Substitution of flight muscle-specific actin by human (beta)-cytoplasmic actin in the indirect flight muscle of Drosophila. Journal of cell science, Vol. 112, H. 21. pp. 3627-3639. Stoffler, D. and Fahrenkrog, B. and Aebi, U.. (1999) The nuclear pore complex : from molecular architecture to functional dynamics. Current opinion in cell biology, Vol. 11, H. 3. pp. 391-401. Burkhard, P. and Steinmetz, M. O. and Schulthess, T. and Landwehr, R. and Aebi, U. and Kammerer, R. A.. (1998) Crystallization and preliminary X-Ray diffraction analysis of the 190-A-long coiled-coil dimerization domain of the actin-bundling protein cortexillin I from dictyostelium discoideum. Journal of Structural Biology, Vol. 122, H. 3. pp. 293-296. Fahrenkrog, B. and Hurt, E. C. and Aebi, U. and Pante, N.. (1998) Molecular architecture of the yeast nuclear pore complex : localization of Nsp1p subcomplexes. The Journal of cell biology, Vol. 143, H. 3. pp. 577-588. Steinmetz, M. O. and Pluss, C. and Christen, U. and Wolpensinger, B. and Lustig, A. and Werner, E. R. and Wachter, H. and Engel, A. and Aebi, U. and Pfeilschifter, J. and Kammerer, R. A.. (1998) Rat GTP cyclohydrolase I is a homodecameric protein complex containing high-affinity calcium-binding sites. Journal of molecular biology, Vol. 279, H. 1. pp. 189-199. Walz, T. and Haner, M. and Wu, X. R. and Henn, C. and Engel, A. and Sun, T. T. and Aebi, U.. (1995) Towards the molecular architecture of the asymmetric unit membrane of the mammalian urinary bladder epithelium : a closed "twisted ribbon" structure. Journal of molecular biology, Vol. 248, H. 5. pp. 887-900. Bremer, A. and Henn, C. and Goldie, K. N. and Engel, A. and Smith, P. R. and Aebi, U.. (1994) Towards atomic interpretation of F-actin filament three-dimensional reconstructions. Journal of molecular biology, Vol. 242, H. 5. pp. 683-700. Hoenger, A. and Ghosh, R. and Schoenenberger, C. A. and Aebi, U. and Engel, A.. (1993) Direct in situ structural analysis of recombinant outer membrane porins expressed in an OmpA-deficient mutant Escherichia coli strain. Journal of Structural Biology, 111 (3). pp. 212-221. Peter, M. and Heitlinger, E. and Häner, M. and Aebi, U. and Nigg, E. A.. (1991) Disassembly of in vitro formed lamin head-to-tail polymers by CDC2 kinase. The EMBO journal, Vol. 10, H. 6. pp. 1535-1544. Heitlinger, E. and Peter, M. and Häner, M. and Lustig, A. and Aebi, U. and Nigg, E. A.. (1991) Expression of chicken lamin B2 in Escherichia coli : characterization of its structure, assembly, and molecular interactions. The Journal of cell biology, Vol. 113, H. 3. pp. 485-495. Book SectionPlodinec, M. and Loparic, M. and Aebi, U.. (2009) Atomic force microscopy for Biological Imaging and Mechanical testing across Length Scales. In: Live Cell Imaging: A Laboratory Manual. New York, pp. 183-203. Aebi, U. and Baschong, W.. (2006) Glycerol Spraying/Low Angle Rotary Metal Shadowing. In: Cell Biology: A Laboratory Hand Book. Amsterdam, pp. 242-246. Baschong, W. and Aebi, U.. (2006) Negative Staining. In: Cell Biology: A Laboratory Hand Book. Amsterdam, pp. 233-240. Fahrenkrog, B. and Aebi, U.. (2006) The Nuclear Pore Complex. In: Encyclopedic Reference of Genomics and Proteomics. |