Items where contributor is "Trauner, Andrej"

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Trauner, A. and Banaei-Esfahani, A. and Gygli, S. M. and Warmer, P. and Feldmann, J. and Zampieri, M. and Borrell, S. and Collins, B. C. and Beisel, C. and Aebersold, R. and Gagneux, S.. (2021) Expression dysregulation as a mediator of fitness costs in antibiotic resistance. Antimicrob Agents Chemother, 65 (9). e0050421.

Gygli, S. M. and Loiseau, C. and Jugheli, L. and Adamia, N. and Trauner, A. and Reinhard, M. and Ross, A. and Borrell, S. and Aspindzelashvili, R. and Maghradze, N. and Reither, K. and Beisel, C. and Tukvadze, N. and Avaliani, Z. and Gagneux, S.. (2021) Publisher Correction: Prisons as ecological drivers of fitness-compensated multidrug-resistant Mycobacterium tuberculosis. Nat Med, 27 (7). p. 1308.

Gygli, S. M. and Loiseau, C. and Jugheli, L. and Adamia, N. and Trauner, A. and Reinhard, M. and Ross, A. and Borrell, S. and Aspindzelashvili, R. and Maghradze, N. and Reither, K. and Beisel, C. and Tukvadze, N. and Avaliani, Z. and Gagneux, S.. (2021) Prisons as ecological drivers of fitness-compensated multidrug-resistant Mycobacterium tuberculosis. Nat Med, 27. pp. 1171-1177.

Castro, Rhastin A. D. and Ross, Amanda and Kamwela, Lujeko and Reinhard, Miriam and Loiseau, Chloé and Feldmann, Julia and Borrell, Sonia and Trauner, Andrej and Gagneux, Sebastien. (2020) The genetic background modulates the evolution of fluoroquinolone-resistance in Mycobacterium tuberculosis. Molecular biology and evolution, 37 (1). pp. 195-207.

Øyås, Ove and Borrell, Sonia and Trauner, Andrej and Zimmermann, Michael and Feldmann, Julia and Liphardt, Thomas and Gagneux, Sebastien and Stelling, Jörg and Sauer, Uwe and Zampieri, Mattia. (2020) Model-based integration of genomics and metabolomics reveals SNP functionality in Mycobacterium tuberculosis. Proceedings of the National Academy of Sciences of the United States of America, 117 (15). pp. 8494-8502.

Borrell, Sònia and Trauner, Andrej and Brites, Daniela and Rigouts, Leen and Loiseau, Chloe and Coscolla, Mireia and Niemann, Stefan and De Jong, Bouke and Yeboah-Manu, Dorothy and Kato-Maeda, Midori and Feldmann, Julia and Reinhard, Miriam and Beisel, Christian and Gagneux, Sebastien. (2019) Reference set of Mycobacterium tuberculosis clinical strains: a tool for research and product development. PLoS ONE, 14 (3). e0214088.

Payne, Joshua L. and Menardo, Fabrizio and Trauner, Andrej and Borrell, Sonia and Gygli, Sebastian M. and Loiseau, Chloe and Gagneux, Sebastien and Hall, Alex R.. (2019) Transition bias influences the evolution of antibiotic resistance in Mycobacterium tuberculosis. PLoS Biology, 17 (5). e3000265.

Zampieri, Mattia and Szappanos, Balazs and Buchieri, Maria Virginia and Trauner, Andrej and Piazza, Ilaria and Picotti, Paola and Gagneux, Sébastien and Borrell, Sonia and Gicquel, Brigitte and Lelievre, Joel and Papp, Balazs and Sauer, Uwe. (2018) High-throughput metabolomic analysis predicts mode of action of uncharacterized antimicrobial compounds. Science Translational Medicine, 10 (429). eaal3973.

Menardo, Fabrizio and Loiseau, Chloé and Brites, Daniela and Coscolla, Mireia and Gygli, Sebastian M. and Rutaihwa, Liliana K. and Trauner, Andrej and Beisel, Christian and Borrell, Sonia and Gagneux, Sebastien. (2018) Treemmer : a tool to reduce large phylogenetic datasets with minimal loss of diversity. BMC bioinformatics, 19 (1). p. 164.

Borrell, Sonia and Trauner, Andrej. (2017) Strain diversity and the evolution of antibiotic resistance. Advances in experimental medicine and biology, 1019. pp. 263-279.