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Items where contributor is "Castano Diez, Daniel"

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2019

Castaño-Díez, Daniel and Zanetti, Giulia. (2019) In situ structure determination by subtomogram averaging. Current Opinion in Structural Biology, 58. pp. 68-75.

Syntychaki, Anastasia and Rima, Luca and Schmidli, Claudio and Stohler, Thomas and Bieri, Andrej and Sütterlin, Rosmarie and Stahlberg, Henning and Castaño-Díez, Daniel and Braun, Thomas. (2019) "Differential Visual Proteomics": Enabling the Proteome-Wide Comparison of Protein Structures of Single-Cells. Journal of proteome research, 18 (9). pp. 3521-3531.

Shahmoradian, Sarah H. and Lewis, Amanda J. and Genoud, Christel and Hench, Jürgen and Moors, Tim E. and Navarro, Paula P. and Castaño-Díez, Daniel and Schweighauser, Gabriel and Graff-Meyer, Alexandra and Goldie, Kenneth N. and Sütterlin, Rosmarie and Huisman, Evelien and Ingrassia, Angela and de Gier, Yvonne and Rozemuller, Annemieke J. M. and Wang, Jing and De Paepe, Anne and Erny, Johannes and Staempfli, Andreas and Hoernschemeyer, Joerg and Großerüschkamp, Frederik and Niedieker, Daniel and El-Mashtoly, Samir F. and Quadri, Marialuisa and Van IJcken, Wilfred F. J. and Bonifati, Vincenzo and Gerwert, Klaus and Bohrmann, Bernd and Frank, Stephan and Britschgi, Markus and Stahlberg, Henning and Van de Berg, Wilma D. J. and Lauer, Matthias E.. (2019) Lewy pathology in Parkinson's disease consists of crowded organelles and lipid membranes. Nature Neuroscience, 22 (7). pp. 1099-1109.

Irastorza-Azcarate, Ibai and Castaño-Díez, Daniel and Devos, Damien and Gallego, Oriol. (2019) Live-cell structural biology to solve biological mechanisms: the case of the exocyst. Structure, 27 (6). pp. 886-892.

2018

Navarro, Paula P. and Stahlberg, Henning and Castaño-Díez, Daniel. (2018) Protocols for Subtomogram Averaging of Membrane Proteins in the Dynamo Software Package. Frontiers in Molecular Biosciences, 5. p. 82.

Opara, Nadia L. and Mohacsi, Istvan and Makita, Mikako and Castano-Diez, Daniel and Diaz, Ana and Juranić, Pavle and Marsh, May and Meents, Alke and Milne, Christopher J. and Mozzanica, Aldo and Padeste, Celestino and Panneels, Valérie and Sikorski, Marcin and Song, Sanghoon and Stahlberg, Henning and Vartiainen, Ismo and Vera, Laura and Wang, Meitian and Willmott, Philip R. and David, Christian. (2018) Demonstration of femtosecond X-ray pump X-ray probe diffraction on protein crystals. Structural Dynamics, 5 (5). 054303.

2017

Castaño-Díez, Daniel and Kudryashev, Mikhail and Stahlberg, Henning. (2017) Dynamo Catalogue: Geometrical tools and data management for particle picking in subtomogram averaging of cryo-electron tomograms. Journal of Structural Biology, 197 (2). pp. 135-144.

Ertel, Kenneth J. and Benefield, Desiree and Castaño-Díez, Daniel and Pennington, Janice G. and Horswill, Mark and den Boon, Johan A. and Otegui, Marisa S. and Ahlquist, Paul . (2017) Cryo-electron tomography reveals novel features of a viral RNA replication compartment. eLife, 6. e25940.

Castaño-Díez, Daniel. (2017) The Dynamo package for tomography and subtomogram averaging: components for MATLAB, GPU computing and EC2 Amazon Web Services. Acta Crystallographica Section D, 73 (6). pp. 478-487.

Biyani, Nikhil and Righetto, Ricardo D. and McLeod, Robert and Caujolle-Bert, Daniel and Castano-Diez, Daniel and Goldie, Kenneth N. and Stahlberg, Henning . (2017) The interface between data collection and data processing in cryo-EM. Journal of structural biology, 198 (2). pp. 124-133.

2016

Kudryashev, Mikhail and Castaño-Díez, Daniel and Deluz, Cédric and Hassaine, Gherici and Grasso, Luigino and Graf-Meyer, Alexandra and Vogel, Horst and Stahlberg, Henning. (2016) The Structure of the Mouse Serotonin 5-HT3 Receptor in Lipid Vesicles. Structure, 24 (1). pp. 165-170.

2015

Gil-Carton, David and Abrescia, Nicola GA and Charro, Diego and Peralta, Bibiana and Castano-Diez, Daniel and Oksanen, Hanna M. and Bamford, Dennis H. and Jaakkola, Salla T. . (2015) Insight into the assembly of viruses with vertical single β-barrel major capsid proteins. Structure, 23 (10). pp. 1866-1877.

2010

Schenk, Andreas D. and Castaño-Díez, Daniel and Gipson, Bryant and Arheit, Marcel and Zeng, Xiangyan and Stahlberg, Henning. (2010) 3D reconstruction from 2D crystal image and diffraction data. Methods in enzymology, Vol. 482. pp. 101-129.