Alm, Erik and Broberg, Eeva K. and Connor, Thomas and Hodcroft, Emma B. and Komissarov, Andrey B. and Maurer-Stroh, Sebastian and Melidou, Angeliki and Neher, Richard A. and O'Toole, Áine and Pereyaslov, Dmitriy. (2020) Geographical and temporal distribution of SARS-CoV-2 clades in the WHO European Region, January to June 2020. Eurosurveillance, 25 (32). p. 2001410.
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Abstract
We show the distribution of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) genetic clades over time and between countries and outline potential genomic surveillance objectives. We applied three genomic nomenclature systems to all sequence data from the World Health Organization European Region available until 10 July 2020. We highlight the importance of real-time sequencing and data dissemination in a pandemic situation, compare the nomenclatures and lay a foundation for future European genomic surveillance of SARS-CoV-2.
| Faculties and Departments: | 05 Faculty of Science > Departement Biozentrum > Computational & Systems Biology > Computational Modeling of Biological Processes (Neher) |
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| UniBasel Contributors: | Neher, Richard A and Hodcroft, Emma |
| Item Type: | Article, refereed |
| Article Subtype: | Research Article |
| Publisher: | Institut de Veille Sanitaire |
| ISSN: | 1560-7917 |
| Note: | Publication type according to Uni Basel Research Database: Journal article |
| Language: | English |
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| Identification Number: | |
| edoc DOI: | |
| Last Modified: | 31 Jan 2022 10:35 |
| Deposited On: | 31 Jan 2022 10:35 |
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