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Evaluation of two workflows for whole genome sequencing-based typing of influenza A viruses

Wüthrich, Daniel and Lang, Daniela and Müller, Nicola F. and Neher, Richard A. and Stadler, Tanja and Egli, Adrian. (2019) Evaluation of two workflows for whole genome sequencing-based typing of influenza A viruses. Journal of Virological Methods, 266. pp. 30-33.

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Abstract

We compared two sample preparation protocols for whole genome sequencing of influenza A viruses. Each protocol was assessed using cDNA quantity and quality and the resulting mean genome coverage after sequencing. Both protocols produced acceptable result for samples with high viral load, whereas one protocol performed slightly better with limited virus count.
Faculties and Departments:05 Faculty of Science > Departement Biozentrum > Computational & Systems Biology > Computational Modeling of Biological Processes (Neher)
UniBasel Contributors:Neher, Richard A
Item Type:Article, refereed
Article Subtype:Research Article
Publisher:Elsevier
ISSN:0166-0934
Note:Publication type according to Uni Basel Research Database: Journal article
Language:English
Identification Number:
edoc DOI:
Last Modified:11 Nov 2019 14:00
Deposited On:04 Nov 2019 15:44

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