Stress-induced mobilization of retrotransposons for plant breeding

Thieme, Michael. Stress-induced mobilization of retrotransposons for plant breeding. 2017, Doctoral Thesis, University of Basel, Faculty of Science.


Official URL: http://edoc.unibas.ch/diss/DissB_12421

Downloads: Statistics Overview


Environmental stresses can trigger the activation and amplification of retrotransposons (retroTEs) in eukaryotes. The mobilization of retroTEs via their characteristic copy and paste mechanism, known to induce (epi)genetic diversity, is one the major drivers of genome evolution in plants and possibly most eukaryotes. Due to their potential as powerful mediators of adaptation to different environmental conditions, retroTEs are increasingly gaining attention as an endogenous genetic resource that could be harnessed for plant breeding. However, as transposition can also lead to detrimental mutations, retroTE mobility is normally limited by sophisticated silencing pathways implemented by their hosts.
In this work, I uncover the role of RNA polymerase II (Pol II) as a key regulator of retroTE-activity. By using two different inhibitors that specifically target the initiation of TE-silencing in plants, I was able to mobilize a stress responsive retroTE in Arabidopsis and thus opened up the so far sealed (epi)genetic resource of retroTEs for plant breeding. Due to the observation that the treatment with the two inhibitors also mobilized a retroTE in the distantly related rice crop, I conclude that this approach could in principle be used to mobilize retroTEs in virtually any plant. Besides major advances in the field of epigenetics and retroTE- silencing, this work indeed provides the basis for a completely new approach that has also been patented and already commercialized in a start-up company. Thus, the second part of this thesis is thematically situated at the interface of science & innovation and science & policy. The described measures taken to communicate and discuss this new breeding approach form the basis for the futures public debate on the topic.
Advisors:Boller, Thomas and Molinier, Jean
Faculties and Departments:05 Faculty of Science > Departement Umweltwissenschaften > Ehemalige Einheiten Umweltwissenschaften > Pflanzenphysiologie Pathogenabwehr (Boller)
UniBasel Contributors:Boller, Thomas
Item Type:Thesis
Thesis Subtype:Doctoral Thesis
Thesis no:12421
Thesis status:Complete
Number of Pages:1 Online-Ressource (VI, 214 Seiten)
Identification Number:
edoc DOI:
Last Modified:08 Feb 2020 14:45
Deposited On:26 Jan 2018 14:04

Repository Staff Only: item control page