Items where Division is "09 Associated Institutions > Swiss Tropical and Public Health Institute (Swiss TPH) > Former Units within Swiss TPH > Infectious Disease Modelling > Epidemiology and Transmission Dynamics (Smith)"

Article

Galactionova, K. and Smith, T. A. and Penny, M. A.. (2021) Insights from modelling malaria vaccines for policy decisions: the focus on RTS,S. Malar J, 20. p. 439.

Multerer, L. and Glass, T. R. and Vanobberghen, F. and Smith, T.. (2021) Analysis of contamination in cluster randomized trials of malaria interventions. Trials, 22. p. 613.

Multerer, L. and Vanobberghen, F. and Glass, T. R. and Hiscox, A. and Lindsay, S. W. and Takken, W. and Tiono, A. and Smith, T.. (2021) Estimating intervention effectiveness in trials of malaria interventions with contamination. Malar J, 20. p. 413.

Ralaidovy, A. H. and Lauer, J. A. and Pretorius, C. and Briët, O. J. and Patouillard, E.. (2021) Priority setting in HIV, tuberculosis, and malaria - new cost-effectiveness results from WHO-CHOICE. Int J Health Policy Manag, 10 (11). pp. 678-696.

Reiker, T. and Golumbeanu, M. and Shattock, A. and Burgert, L. and Smith, T. A. and Filippi, S. and Cameron, E. and Penny, M. A.. (2021) Emulator-based Bayesian optimization for efficient multi-objective calibration of an individual-based model of malaria. Nat Commun, 12. p. 7212.

Runge, M. and Mapua, S. and Nambunga, I. and Smith, T. A. and Chitnis, N. and Okumu, F. and Pothin, E.. (2021) Correction to: Evaluation of different deployment strategies for larviciding to control malaria: a simulation study. Malar J, 20. p. 350.

Runge, M. and Mapua, S. and Nambunga, I. and Smith, T. A. and Chitnis, N. and Okumu, F. and Pothin, E.. (2021) Evaluation of different deployment strategies for larviciding to control malaria: a simulation study. Malar J, 20. p. 324.

Smith, T. and Denz, A. and Ombok, M. and Bayoh, N. and Koenker, H. and Chitnis, N. and Briët, O. and Yukich, J. and Gimnig, J. E.. (2021) Incidence and consequences of damage to insecticide-treated mosquito nets in Kenya. Malar J, 20. p. 476.

Briet, Olivier and Koenker, Hannah and Norris, Laura and Wiegand, Ryan and Vanden Eng, Jodi and Thackeray, Alex and Williamson, John and Gimnig, John E. and Fortes, Filomeno and Akogbeto, Martin and Yadouleton, Anges W. and Ombok, Maurice and Bayoh, M. Nabie and Mzilahowa, Themba and Abílio, Ana Paula and Mabunda, Samuel and Cuamba, Nelson and Diouf, Elhadji and Konaté, Lassana and Hamainza, Busiku and Katebe-Sakala, Cecilia and Ponce de León, Gabriel and Asamoa, Kwame and Wolkon, Adam and Smith, Stephen C. and Swamidoss, Isabel and Green, Mike and Gueye, Salam and Mihigo, Jules and Morgan, Juliette and Dotson, Ellen and Craig, Allen S. and Tan, Kathrine R. and Wirtz, Robert A. and Smith, Tom. (2020) Attrition, physical integrity and insecticidal activity of long-lasting insecticidal nets in sub-Saharan Africa and modelling of their impact on vectorial capacity. Malaria journal, 19. p. 310.

Galactionova, Katya and Velarde, Mar and Silumbe, Kafula and Miller, John and McDonnell, Anthony and Aguas, Ricardo and Smith, Thomas A. and Penny, Melissa A.. (2020) Costing malaria interventions from pilots to elimination programmes. Malaria journal, 19. p. 332.

Gruenberg, Maria and Hofmann, Natalie E. and Nate, Elma and Karl, Stephan and Robinson, Leanne J. and Lanke, Kjerstin and Smith, Thomas A. and Bousema, Teun and Felger, Ingrid. (2020) qRT-PCR versus IFA-based quantification of male and female gametocytes in low-density Plasmodium falciparum infections and their relevance for transmission. Journal of infectious diseases, 221 (4). pp. 598-607.

Hastings, I. M. and Hardy, D. and Kay, K. and Sharma, R.. (2020) Incorporating genetic selection into individual-based models of malaria and other infectious diseases. Evol Appl, 13 (10). pp. 2723-2739.

Penny, Melissa A. and Camponovo, Flavia and Chitnis, Nakul and Smith, Thomas A. and Tanner, Marcel. (2020) Future use-cases of vaccines in malaria control and elimination. Parasite epidemiology and control, 10. e00145.

Plucinski, Mateusz M. and Candrinho, Baltazar and Dimene, Mercia and Smith, Tom and Thwing, Julie and Colborn, James and Rogier, Eric and Zulliger, Rose. (2020) Estimation of malaria-attributable fever in malaria test-positive febrile outpatients in three provinces of Mozambique, 2018. American journal of tropical medicine and hygiene, 102 (1). pp. 151-155.

Runge, Manuela and Molteni, Fabrizio and Mandike, Renata and Snow, Robert W. and Lengeler, Christian and Mohamed, Ally and Pothin, Emilie. (2020) Applied mathematical modelling to inform national malaria policies, strategies and operations in Tanzania. Malaria journal, 19. p. 101.

Runge, Manuela and Snow, Robert W. and Molteni, Fabrizio and Thawer, Sumaiyya and Mohamed, Ally and Mandike, Renata and Giorgi, Emanuele and Macharia, Peter M. and Smith, Thomas A. and Lengeler, Christian and Pothin, Emilie. (2020) Simulating the council-specific impact of anti-malaria interventions: a tool to support malaria strategic planning in Tanzania. PLoS ONE, 15 (2). e0228469.

Stresman, Gillian and Sepúlveda, Nuno and Fornace, Kimberly and Grignard, Lynn and Mwesigwa, Julia and Achan, Jane and Miller, John and Bridges, Daniel J. and Eisele, Thomas P. and Mosha, Jacklin and Lorenzo, Pauline Joy and Macalinao, Maria Lourdes and Espino, Fe Esperanza and Tadesse, Fitsum and Stevenson, Jennifer C. and Quispe, Antonio M. and Siqueira, André and Lacerda, Marcus and Yeung, Shunmay and Sovannaroth, Siv and Pothin, Emilie and Gallay, Joanna and Hamre, Karen E. and Young, Alyssa and Lemoine, Jean Frantz and Chang, Michelle A. and Phommasone, Koukeo and Mayxay, Mayfong and Landier, Jordi and Parker, Daniel M. and Von Seidlein, Lorenz and Nosten, Francois and Delmas, Gilles and Dondorp, Arjen and Cameron, Ewan and Battle, Katherine and Bousema, Teun and Gething, Peter and D'Alessandro, Umberto and Drakeley, Chris. (2020) Association between the proportion of Plasmodium falciparum and Plasmodium vivax infections detected by passive surveillance and the magnitude of the asymptomatic reservoir in the community: a pooled analysis of paired health facility and community data. The Lancet infectious diseases, 20 (8). pp. 953-963.

Thawer, Sumaiyya G. and Chacky, Frank and Runge, Manuela and Reaves, Erik and Mandike, Renata and Lazaro, Samwel and Mkude, Sigsbert and Rumisha, Susan F. and Kumalija, Claud and Lengeler, Christian and Mohamed, Ally and Pothin, Emilie and Snow, Robert W. and Molteni, Fabrizio. (2020) Sub-national stratification of malaria risk in mainland Tanzania: a simplified assembly of survey and routine data. Malaria journal, 19. p. 177.

Yamba, E. L. and Tompkins, A. M. and Fink, A. H. and Ermert, V. and Amelie, M. D. and Amekudzi, L. K. and Briët, O. J. T.. (2020) Monthly entomological inoculation rate data for studying the seasonality of malaria transmission in Africa. Data, 5 (2). p. 31.

Briët, Olivier J. T. and Impoinvil, Daniel E. and Chitnis, Nakul and Pothin, Emilie and Lemoine, Jean Frantz and Frederic, Joseph and Smith, Thomas A.. (2019) Models of effectiveness of interventions against malaria transmitted by Anopheles albimanus. Malaria journal, 18. p. 263.

Brunner, Nina C. and Chacky, Frank and Mandike, Renata and Mohamed, Ally and Runge, Manuela and Thawer, Sumaiyya G. and Ross, Amanda and Vounatsou, Penelope and Lengeler, Christian and Molteni, Fabrizio and Hetzel, Manuel W.. (2019) The potential of pregnant women as a sentinel population for malaria surveillance. Malaria journal, 18. p. 370.

Chitnis, Nakul and Pemberton-Ross, Peter and Yukich, Josh and Hamainza, Busiku and Miller, John and Reiker, Theresa and Eisele, Thomas P. and Smith, Thomas A.. (2019) Theory of reactive interventions in the elimination and control of malaria. Malaria journal, 18. p. 266.

Jarvis, Christopher I. and Multerer, Lea and Lewis, Daniel and Binka, Fred and Edmunds, W. John and Alexander, Neal and Smith, Thomas A.. (2019) Spatial effects of permethrin-impregnated bed nets on child mortality: 26 years on, a spatial reanalysis of a cluster randomized trial. American journal of tropical medicine and hygiene, 101 (6). pp. 1434-1441.

Laager, Mirjam and Léchenne, Monique and Naissengar, Kemdongarti and Mindekem, Rolande and Oussiguere, Assandi and Zinsstag, Jakob and Chitnis, Nakul. (2019) A metapopulation model of dog rabies transmission in N'Djamena, Chad. Journal of theoretical biology, 462. pp. 408-417.

Le Rutte, E. A. and Zijlstra, E. E. and de Vlas, S. J.. (2019) Post-Kala-Azar dermal leishmaniasis as a reservoir for visceral leishmaniasis transmission. Trends in parasitology, 35 (8). pp. 590-592.

Multerer, Lea and Smith, Thomas and Chitnis, Nakul. (2019) Modeling the impact of sterile males on an Aedes aegypti population with optimal control. Mathematical biosciences : an international journal, 311. pp. 91-102.

Nambuusi, Betty B. and Ssempiira, Julius and Makumbi, Fredrick E. and Utzinger, Jürg and Kasasa, Simon and Vounatsou, Penelope. (2019) Geographical variations of the associations between health interventions and all-cause under-five mortality in Uganda. BMC public health, 19. p. 1330.

Plucinski, Mateusz M. and Rogier, Eric and Dimbu, Pedro Rafael and Fortes, Filomeno and Halsey, Eric S. and Aidoo, Michael and Smith, Tom. (2019) Performance of antigen concentration thresholds for attributing fever to malaria among outpatients in Angola. Journal of clinical microbiology, 57 (3). e01901-18.

Reiker, Theresa and Chitnis, Nakul and Smith, Thomas. (2019) Modelling reactive case detection strategies for interrupting transmission of Plasmodium falciparum malaria. Malaria journal, 18. p. 259.

Ricotta, Emily and Oppong, Samuel and Yukich, Joshua O. and Briët, Olivier J. T.. (2019) Determinants of bed net use conditional on access in population surveys in Ghana. Malaria journal, 18. p. 63.

Saddler, A. and Kreppel, K. S. and Chitnis, N. and Smith, T. A. and Denz, A. and Moore, J. D. and Tambwe, M. M. and Moore, S. J.. (2019) The development and evaluation of a self-marking unit to estimate malaria vector survival and dispersal distance. Malaria journal, 18. p. 441.

Ali, Ali Mohamed and Penny, Melissa A. and Smith, Thomas A. and Workman, Lesley and Sasi, Philip and Adjei, George O. and Aweeka, Francesca and Kiechel, Jean-René and Jullien, Vincent and Rijken, Marcus J. and McGready, Rose and Mwesigwa, Julia and Kristensen, Kim and Stepniewska, Kasia and Tarning, Joel and Barnes, Karen I. and Denti, Paolo and Wwarn Amodiaquine PK Study Group, . (2018) Population pharmacokinetics of the antimalarial amodiaquine: a pooled analysis to optimize dosing. Antimicrobial agents and chemotherapy, 62 (10). e02193-17.

Amek, Nyaguara O. and Van Eijk, Annemieke and Lindblade, Kim A. and Hamel, Mary and Bayoh, Nabie and Gimnig, John and Laserson, Kayla F. and Slutsker, Laurence and Smith, Thomas and Vounatsou, Penelope. (2018) Infant and child mortality in relation to malaria transmission in KEMRI/CDC HDSS, Western Kenya: validation of verbal autopsy. Malaria journal, 17. p. 37.

Barbosa, Susana and Kay, Katherine and Chitnis, Nakul and Hastings, Ian M.. (2018) Modelling the impact of insecticide-based control interventions on the evolution of insecticide resistance and disease transmission. Parasites and Vectors, 11. p. 482.

Boyer, Sebastien and Pothin, Emilie and Randriamaherijaona, Sanjiarizaha and Rogier, Christophe and Kesteman, Thomas. (2018) Testing bio-efficacy of insecticide-treated nets with fewer mosquitoes for enhanced malaria control. Scientific reports, 8 (1). p. 16769.

Buonomo, B. and Chitnis, N. and D'Onofrio, A.. (2018) Preface to the special issue on “Demographic and temporal heterogeneities in infectious disease epidemiology”. Ricerche di matematica, 67 (1). pp. 3-6.

Buonomo, B. and Chitnis, N. and D'Onofrio, A.. (2018) Seasonality in epidemic models : a literature review. Ricerche di matematica, 67. pp. 7-25.

Buonomo, B. and Chitnis, N. and D'Onofrio, A.. (2018) Time heterogeneous programs of vaccination awareness : modeling and analysis. Ricerche di matematica, 67 (1). pp. 205-225.

Bürli, Christine and Harbrecht, Helmut and Odermatt, Peter and Sayasone, Somphou and Chitnis, Nakul. (2018) Analysis of interventions against the liver fluke, Opisthorchis viverrini. Mathematical biosciences : an international journal, 303. pp. 115-125.

Hella, Jerry and Cercamondi, Colin I. and Mhimbira, Francis and Sasamalo, Mohamed and Stoffel, Nicole and Zwahlen, Marcel and Bodmer, Thomas and Gagneux, Sebastien and Reither, Klaus and Zimmermann, Michael B. and Risch, Lorenz and Fenner, Lukas. (2018) Anemia in tuberculosis cases and household controls from Tanzania: contribution of disease, coinfections, and the role of hepcidin. PLoS ONE, 13 (4). e0195985.

Hofmann, Natalie E. and Gruenberg, Maria and Nate, Elma and Ura, Alice and Rodriguez-Rodriguez, Daniela and Salib, Mary and Mueller, Ivo and Smith, Thomas A. and Laman, Moses and Robinson, Leanne J. and Felger, Ingrid. (2018) Assessment of ultra-sensitive malaria diagnosis versus standard molecular diagnostics for malaria elimination : an in-depth molecular community cross-sectional study. The Lancet infectious diseases, 18 (10). pp. 1108-1116.

Informal Expert Group on Gambiense HAT Reservoirs, and Büscher, Philippe and Bart, Jean-Mathieu and Boelaert, Marleen and Bucheton, Bruno and Cecchi, Giuliano and Chitnis, Nakul and Courtin, David and Figueiredo, Luisa M. and Franco, José-Ramon and Grébaut, Pascal and Hasker, Epco and Ilboudo, Hamidou and Jamonneau, Vincent and Koffi, Mathurin and Lejon, Veerle and MacLeod, Annette and Masumu, Justin and Matovu, Enock and Mattioli, Raffaele and Noyes, Harry and Picado, Albert and Rock, Kat S. and Rotureau, Brice and Simo, Gustave and Thévenon, Sophie and Trindade, Sandra and Truc, Philippe and Van Reet, Nick. (2018) Do cryptic reservoirs threaten gambiense-sleeping sickness elimination? Trends in Parasitology, 34 (3). pp. 197-207.

Nichols, Erin K. and Byass, Peter and Chandramohan, Daniel and Clark, Samuel J. and Flaxman, Abraham D. and Jakob, Robert and Leitao, Jordana and Maire, Nicolas and Rao, Chalapati and Riley, Ian and Setel, Philip W. and Verbal Autopsy Working Group, W. H. O.. (2018) The WHO 2016 verbal autopsy instrument: an international standard suitable for automated analysis by InterVA, InSilicoVA, and Tariff 2.0. PLoS medicine, 15 (1). e1002486.

Rock, Kat S. and Ndeffo-Mbah, Martial L. and Castaño, Soledad and Palmer, Cody and Pandey, Abhishek and Atkins, Katherine E. and Ndung'u, Joseph M. and Hollingsworth, T. Déirdre and Galvani, Alison and Bever, Caitlin and Chitnis, Nakul and Keeling, Matt J.. (2018) Assessing strategies against gambiense sleeping sickness through mathematical modeling. Clinical Infectious Diseases, 66 (Suppl 4). S286-S292.

White, Michael T. and Karl, Stephan and Koepfli, Cristian and Longley, Rhea J. and Hofmann, Natalie E. and Wampfler, Rahel and Felger, Ingrid and Smith, Tom and Nguitragool, Wang and Sattabongkot, Jetsumon and Robinson, Leanne and Ghani, Azra and Mueller, Ivo. (2018) Plasmodium vivax and Plasmodium falciparum infection dynamics: re-infections, recrudescences and relapses. Malaria journal, 17. p. 170.

Abboubakar, H. and Buonomo, B. and Chitnis, N.. (2017) Erratum to: modelling the effects of malaria infection on mosquito biting behaviour and attractiveness of humans. Ricerche di matematica, 66 (2). p. 647.

Bless, Philipp Justus and Schmutz, Claudia and Mäusezahl, Daniel. (2017) The recurrent campylobacteriosis epidemic over Christmas and New Year in European countries, 2006-2014. BMC research notes, 10. p. 266.

Brady, Oliver J. and Slater, Hannah C. and Pemberton-Ross, Peter James and Wenger, Edward and Maude, Richard J. and Ghani, Azra C. and Penny, Melissa A. and Gerardin, Jaline and White, Lisa J. and Chitnis, Nakul and Aguas, Ricardo and Hay, Simon I. and Smith, David L. and Stuckey, Erin M. and Okiro, Emelda A and Smith, Thomas A. and Okell, Lucy C.. (2017) Role of mass drug administration in elimination of Plasmodium falciparum malaria: a consensus modelling study. Lancet Glob Health, 5 (7). e680-e687.

Camponovo, Flavia and Bever, Caitlin A. and Galactionova, Katya and Smith, Thomas and Penny, Melissa A.. (2017) Incidence and admission rates for severe malaria and their impact on mortality in Africa. Malaria journal, 16. p. 1.

Cobos Muñoz, Daniel and Merino Amador, Paloma and Monzon Llamas, Laura and Martinez Hernandez, David and Santos Sancho, Juana Maria. (2017) Decentralization of health systems in low and middle income countries : a systematic review. International journal of public health, 62 (2). pp. 219-229.

Cohen, Justin M. and Le Menach, Arnaud and Pothin, Emilie and Eisele, Thomas P. and Gething, Peter W. and Eckhoff, Philip A. and Moonen, Bruno and Schapira, Allan and Smith, David L.. (2017) Mapping multiple components of malaria risk for improved targeting of elimination interventions. Malaria journal, 16. p. 459.

De Santis, Olga and Kilowoko, Mary and Kyungu, Esther and Sangu, Willy and Cherpillod, Pascal and Kaiser, Laurent and Genton, Blaise and D'Acremont, Valérie. (2017) Predictive value of clinical and laboratory features for the main febrile diseases in children living in Tanzania : a prospective observational study. PLoS ONE, 12 (5). e0173314.

Galactionova, Katya and Smith, Thomas A. and de Savigny, Don and Penny, Melissa A.. (2017) State of inequality in malaria intervention coverage in sub-Saharan African countries. BMC medicine, 15. p. 185.

Galactionova, Katya and Tediosi, Fabrizio and Camponovo, Flavia and Smith, Thomas A. and Gething, Peter W. and Penny, Melissa A.. (2017) Country specific predictions of the cost-effectiveness of malaria vaccine RTS,S/AS01 in endemic Africa. Vaccine, 35 (1). pp. 53-60.

Hamilton, Matthew and Mahiane, Guy and Werst, Elric and Sanders, Rachel and Briët, Olivier and Smith, Thomas and Cibulskis, Richard and Cameron, Ewan and Bhatt, Samir and Weiss, Daniel J. and Gething, Peter W. and Pretorius, Carel and Korenromp, Eline L.. (2017) Spectrum-Malaria : a user-friendly projection tool for health impact assessment and strategic planning by malaria control programmes in sub-Saharan Africa. Malaria journal, 16. p. 68.

Kim, Young Eun and Stolk, Wilma A. and Tanner, Marcel and Tediosi, Fabrizio. (2017) Modelling the health and economic impacts of the elimination of river blindness (onchocerciasis) in Africa. BMJ Global Health, 2 (2). e000158.

Kiware, Samson S. and Chitnis, Nakul and Tatarsky, Allison and Wu, Sean and Castellanos, Héctor Manuel Sánchez and Gosling, Roly and Smith, David and Marshall, John M.. (2017) Attacking the mosquito on multiple fronts: insights from the vector control optimization model (VCOM) for malaria elimination. PLoS ONE, 12 (12). e0187680.

Korenromp, Eline and Hamilton, Matthew and Sanders, Rachel and Mahiané, Guy and Briët, Olivier J. T. and Smith, Thomas and Winfrey, William and Walker, Neff and Stover, John. (2017) Impact of malaria interventions on child mortality in endemic African settings: comparison and alignment between LiST and Spectrum-Malaria model. BMC Public Health, 17 (Suppl 4). p. 781.

Lee, B. Y. and Bartsch, S. M. and Stone, N. T. B. and Zhang, S. and Brown, S. T. and Chatterjee, C. and DePasse, J. V. and Zenkov, E. and Briët, O. J. T. and Mendis, C. and Viisainen, K. and Candrinho, B. and Calborn, J.. (2017) The economic value of long-lasting insecticidal nets and indoor residual spraying implementation in Mozambique. American journal of tropical medicine and hygiene, 96 (6). pp. 1430-1440.

McCann, Robert S. and van den Berg, Henk and Diggle, Peter J. and van Vugt, Michèle and Terlouw, Dianne J. and Phiri, Kamija S. and Di Pasquale, Aurelio and Maire, Nicolas and Gowelo, Steven and Mburu, Monicah M. and Kabaghe, Alinune N. and Mzilahowa, Themba and Chipeta, Michael G. and Takken, Willem. (2017) Assessment of the effect of larval source management and house improvement on malaria transmission when added to standard malaria control strategies in southern Malawi: study protocol for a cluster-randomised controlled trial. BMC infectious diseases, 17. p. 639.

Ntamatungiro, Alex J. and Muri, Lukas and Glass, Tracy R. and Erb, Stefan and Battegay, Manuel and Furrer, Hansjakob and Hatz, Christoph and Tanner, Marcel and Felger, Ingrid and Klimkait, Thomas and Letang, Emilio and Kiularco Study Group, . (2017) Strengthening HIV therapy and care in rural Tanzania affects rates of viral suppression. The journal of antimicrobial chemotherapy, 72 (7). pp. 2069-2074.

Penny, Melissa and Smith, Thomas. (2017) Plasmodium falciparum mortality in Africa between 1990 and 2015. The New England Journal of Medicine, 376. pp. 2493-2494.

Ross, P. P. and Chitnis, N. and Pothin, E. and Smith, T. A.. (2017) A stochastic model for the probability of malaria extinction b mass drug administration. Malaria journal, 16. p. 376.

Said, Khadija and Hella, Jerry and Knopp, Stefanie and Nassoro, Tatu and Shija, Neema and Aziz, Fatma and Mhimbira, Francis and Schindler, Christian and Mwingira, Upendo and Mandalakas, Anna M. and Manji, Karim and Tanner, Marcel and Utzinger, Jürg and Fenner, Lukas. (2017) Schistosoma, other helminth infections, and associated risk factors in preschool-aged children in urban Tanzania. PLoS Neglected Tropical Diseases, 11 (11). e0006017.

Smith, Thomas A. and Chitnis, Nakul and Penny, Melissa and Tanner, Marcel. (2017) Malaria modeling in the era of eradication. Cold Spring Harbor perspectives in medicine, 7 (4). a025460.

Touré, Fidèle S. and Kouame, Samson and Tia, Honoré and Monemo, Pacôme and Cissé, Amadou and Diané, Bamourou and Becker, Sören L. and Akoua-Koffi, Chantal. (2017) Epidemiology of paediatric meningitis in central Côte d'Ivoire after the implementation of Haemophilus influenzae type b vaccination. New microbiologica , 40 (3). pp. 170-174.

Yukich, Joshua and Bennett, Adam and Yukich, Rudy and Stuck, Logan and Hamainza, Busiku and Silumbe, Kafula and Smith, Tom and Chitnis, Nakul and Steketee, Richard W. and Finn, Timothy and Eisele, Thomas P. and Miller, John M.. (2017) Estimation of malaria parasite reservoir coverage using reactive case detection and active community fever screening from census data with rapid diagnostic tests in southern Zambia: a re-sampling approach. Malaria journal, 16. p. 317.

Yukich, Joshua O. and Chitnis, Nakul. (2017) Modelling the implications of stopping vector control for malaria control and elimination. Malaria Journal, 16. p. 411.

malERA Refresh Consultative Panel, . (2017) malERA: an updated research agenda for combination interventions and modelling in malaria elimination and eradication. PLoS medicine, 14 (11). e1002453.

Abboubakar, H. and Buonomo, B. and Chitnis, N.. (2016) Modelling the effects of malaria infection on mosquito biting behaviour and attractiveness of humans. Ricerche di matematica, 65. pp. 329-346.

Charlwood, J. D. and Nenhep, S. and Sovannaroth, S. and Morgan, J. C. and Hemingway, J. and Chitnis, N. and Briet, O. T. J.. (2016) 'Nature or nurture': survival rate oviposition interval, and possible gonotrophic discordance among South East Asian anophelines. Malaria Journal, 15 (1). p. 356.

Homan, Tobias and Maire, Nicolas and Hiscox, Alexandra and Di Pasquale, Aurelio and Kiche, Ibrahim and Onoka, Kelvin and Mweresa, Collins and Mukabana, Wolfgang R. and Ross, Amanda and Smith, Thomas A. and Takken, Willem. (2016) Spatially variable risk factors for malaria in a geographically heterogeneous landscape, Western Kenya : an explorative study. Malaria journal, 15. p. 1.

Jaeger, Mulako S. and Briët, Olivier J. T. and Keating, Joseph and Ahorlu, Collins K. and Yukich, Joshua O. and Oppong, Samuel and Nardini, Peter and Pfeiffer, Constanze. (2016) Perceptions on the effect of small electric fans on comfort inside bed nets in southern Ghana : a qualitative study. Malaria journal, 15. p. 580.

Kiware, Samson S. and Russell, Tanya L. and Mtema, Zacharia J. and Malishee, Alpha D. and Chaki, Prosper and Lwetoijera, Dickson and Chanda, Javan and Chinula, Dingani and Majambere, Silas and Gimnig, John E. and Smith, Thomas A. and Killeen, Gerry F.. (2016) A generic schema and data collection forms applicable to diverse entomological studies of mosquitoes. Source code for biology and medicine, 11. p. 4.

Korenromp, Eline and Mahiané, Guy and Hamilton, Matthew and Pretorius, Carel and Cibulskis, Richard and Lauer, Jeremy and Smith, Thomas A. and Briët, Olivier J. T.. (2016) Malaria intervention scale-up in Africa : effectiveness predictions for health programme planning tools, based on dynamic transmission modelling. Malaria journal, 15. p. 417.

Penny, Melissa A. and Verity, Robert and Bever, Caitlin A. and Sauboin, Christophe and Galactionova, Katya and Flasche, Stefan and White, Michael T. and Wenger, Edward A. and Van de Velde, Nicolas and Pemberton-Ross, Peter and Griffin, Jamie T. and Smith, Thomas A. and Eckhoff, Philip A. and Muhib, Farzana and Jit, Mark and Ghani, Azra C.. (2016) Public health impact and cost-effectiveness of the RTS,S/AS01 malaria vaccine : a systematic comparison of predictions from four mathematical models. Lancet, 387 (10016). pp. 367-375.

Ross, Amanda and Koepfli, Cristian and Schoepflin, Sonja and Timinao, Lincoln and Siba, Peter and Smith, Thomas and Mueller, Ivo and Felger, Ingrid and Tanner, Marcel. (2016) The incidence and differential seasonal patterns of Plasmodium vivax primary infections and relapses in a cohort of children in Papua New Guinea. PLoS neglected tropical diseases, 10 (5). e0004582.

Silkey, Mariabeth and Homan, Tobias and Maire, Nicolas and Hiscox, Alexandra and Mukabana, Richard and Takken, Willem and Smith, Thomas A.. (2016) Design of trials for interrupting the transmission of endemic pathogens. Trials, 17. p. 278.

Smith Gueye, Cara and Newby, Gretchen and Gosling, Roland D. and Whittaker, Maxine A. and Chandramohan, Daniel and Slutsker, Laurence and Tanner, Marcel. (2016) Strategies and approaches to vector control in nine malaria-eliminating countries : a cross-case study analysis. Malaria journal, 15. p. 2.

Stone, C. and Chitnis, N. and Gross, K.. (2016) Environment influences on mosquito foraging and inegrated vector management can delay the evolution of behavioral resistance. Evolutionary applications, 9 (3). pp. 502-517.

Stone, C. M. and Kastner, R. and Steinmann, P. and Chitnis, N. and Tanner, M. and Tediosi, F.. (2016) Modelling the health impact and cost-effectiveness of lymphatic filariasis eradication under varying levels of mass drug administration scale-up and geographic coverage. BMJ Global Health, 1. e000021.

Tediosi, F. and Penny, M.. (2016) Evidence for optimal allocation of malaria interventions in Africa. Lancet. Global health, 4 (7). e432-e433.

Vanobberghen, Fiona and Penny, Melissa A. and Duthaler, Urs and Odermatt, Peter and Sayasone, Somphou and Keiser, Jennifer and Tarning, Joel. (2016) Population pharmacokinetic modeling of tribendimidine metabolites in opisthorchis viverrini-Infected adults. Antimicrobial agents and chemotherapy, 60 (10). pp. 5695-5704.

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Briët, Olivier Jt and Penny, Melissa A. and Hardy, Diggory and Awolola, Taiwo S. and Van Bortel, Wim and Corbel, Vincent and Dabiré, Roch K. and Etang, Josiane and Koudou, Benjamin G. and Tungu, Patrick K. and Chitnis, Nakul. (2013) Effects of pyrethroid resistance on the cost effectiveness of a mass distribution of long-lasting insecticidal nets : a modelling study. Malaria journal, Vol. 12 , 77.

Charlwood, J. Derek and Cuamba, Nelson and Tomás, Elsa Ve and Briët, Olivier Jt. (2013) Living on the edge : a longitudinal study of Anopheles funestus in an isolated area of Mozambique. Malaria journal, Vol. 12 , 208.

Crowell, Valerie and Yukich, Joshua O. and Briët, Olivier J. T. and Ross, Amanda and Smith, Thomas A.. (2013) A novel approach for measuring the burden of uncomplicated Plasmodium falciparum malaria : application to data from Zambia. PLoS ONE, Vol. 8, H. 2 , e57297.

Del Valle, Sara Y. and Hyman, J. M. and Chitnis, Nakul. (2013) Mathematical models of contact patterns between age groups for predicting the spread of infectious diseases. Mathematical biosciences and engineering, Vol. 10, H. 5-6. pp. 1475-1497.

Gatton, Michelle L. and Chitnis, Nakul and Churcher, Thomas and Donnelly, Martin J. and Ghani, Azra C. and Godfray, H. Charles J. and Gould, Fred and Hastings, Ian and Marshall, John and Ranson, Hilary and Rowland, Mark and Shaman, Jeff and Lindsay, Steve W.. (2013) The importance of mosquito behavioural adaptations to malaria control in Africa. Evolution : international journal of organic evolution, Vol. 67, no.4. pp. 1218-1230.

Huho, B. and Briët, O. and Seyoum, A. and Sikaala, C. and Bayoh, N. and Gimnig, J. and Okumu, F. and Diallo, D. and Abdulla, S. and Smith, T. and Killeen, G.. (2013) Consistently high estimates for the proportion of human exposure to malaria vector populations occurring indoors in rural Africa. International journal of epidemiology : official journal of the international epidemiological association, Vol. 42, H. 1. pp. 235-247.

Kasasa, Simon and Asoala, Victor and Gosoniu, Laura and Anto, Francis and Adjuik, Martin and Tindana, Cletus and Smith, Thomas and Owusu-Agyei, Seth and Vounatsou, Penelope. (2013) Spatio-temporal malaria transmission patterns in Navrongo demographic surveillance site, northern Ghana. Malaria journal, Vol. 12 , 63.

Nunes, Julia K. and Cárdenas, Vicky and Loucq, Christian and Maire, Nicolas and Smith, Thomas and Shaffer, Craig and Måseide, Kårstein and Brooks, Alan. (2013) Modeling the public health impact of malaria vaccines for developers and policymakers. BMC infectious diseases, Vol. 13 , 295.

Saul, Allan and Smith, Tom and Maire, Nicolas. (2013) Stochastic simulation of endemic Salmonella enterica serovar typhi : the importance of long lasting immunity and the carrier state. PLoS ONE, Vol. 8, H. 9 , e74097.

Smith, T.. (2013) DALY thought. New scientist, Vol. 218, H. 2914 , 35.

Stone, C. M. and Tuten, H. C. and Dobson, S. L.. (2013) Determinants of male Aedes aegypti and Aedes polynesiensis (Diptera: Culicidae) response to sound : efficacy and considerations for use of sound traps in the field. Journal of medical entomology, Vol. 50, H. 4. pp. 723-730.

Stuckey, Erin M. and Smith, Thomas A. and Chitnis, Nakul. (2013) Estimating malaria transmission through mathematical models. Trends in parasitology, Vol. 29, H. 10. pp. 477-482.

Tuten, H. C. and Stone, C. M. and Dobson, S. L.. (2013) Swarming behavior of Aedes polynesiensis (Diptera: Culicidae) and characterization of swarm markers in American Samoa. Journal of medical entomology, Vol. 50, H. 4. pp. 740-747.

Briët, O. J. T.. (2012) Solar net fan : a potential tool to enhance bednet usage in hot climates. The Malaria world journal, Vol. 3, H. 4. pp. 1-6.

Brooks, A. and Ba-Nguz, A.. (2012) Country planning for health interventions under development : lessons from the malaria vaccine decision-making framework and implications for other new interventions. Health policy and planning : a journal on health in development, Vol. 27, H. Suppl 2 , ii50-ii61.

Brooks, A. and Nunes, J. K. and Garnett, A. and Biellik, R. and Leboulleux, D. and Birkett, A. J. and Loucq, C.. (2012) Aligning new interventions with developing country health systems : target product profiles, presentation, and clinical trial design. Global public health, Vol. 7, H. 9. pp. 931-945.

Chitnis, N. and Smith, T. A.. (2012) Mathematical illiteracy impedes progress in biology. Proceedings of the National Academy of Sciences of the United States of America, Vol. 109, H. 45 , E3055.

Masanja, I. M. and Lutambi, A. M. and Khatib, R. A.. (2012) Do health workers' preferences influence their practices? : Assessment of providers' attitude and personal use of new treatment recommendations for management of uncomplicated malaria, Tanzania. BMC public health, Vol. 12 , 956.

Schapira, A. and Boutsika, K.. (2012) Malaria ecotypes and stratification. Advances in parasitology, Vol. 78. pp. 97-167.

Seyoum, A. and Sikaala, C. H. and Chanda, J. and Chinula, D. and Ntamatungiro, A. J. and Hawela, M. and Miller, J. M. and Russell, T. L. and Briët, O. J. and Killeen, G. F.. (2012) Human exposure to anopheline mosquitoes occurs primarily indoors, even for users of insecticide-treated nets in Luangwa Valley, south-east Zambia. Parasites and Vectors, 5 (101).

Smith, Thomas and Tediosi, Fabrizio. (2012) Simulating the impact of malaria vaccination : what has been learnt? Expert review of vaccines, Vol. 11, H. 7. pp. 751-753.

Amek, N. and Bayoh, N. and Hamel, M. and Lindblade, K. A. and Gimnig, J. and Laserson, K. F. and Slutsker, L. and Smith, T. and Vounatsou, P.. (2011) Spatio-temporal modeling of sparse geostatistical malaria sporozoite rate data using a zero inflated binomial model. Spatial and spatio-temporal epidemiology, Vol. 2, H. 4. pp. 283-290.

Arenja, Nisha and Breidthardt, Tobias and Socrates, Thenral and Schindler, Christian and Heinisch, Corinna and Tschung, Christopher and Potocki, Mihael and Gualandro, Danielle and Mueller, Christian. (2011) Risk stratification for 1-year mortality in acute heart failure. Swiss Medical Weekly, 141. w13259.

Balanescu, Sandrina and Kopp, Peter and Gaskill, Mary Beth and Morgenthaler, Nils G. and Schindler, Christian and Rutishauser, Jonas. (2011) Correlation of plasma copeptin and vasopressin concentrations in hypo-, iso-, and hyperosmolar states. Journal of clinical endocrinology and metabolism, Vol. 96, H. 4. pp. 1046-1052.

Bretscher, M. T. and Maire, N. and Chitnis, N. and Felger, I. and Owusu-Agyei S., and Smith, T.. (2011) The distribution of Plasmodium falciparum infection durations. Epidemics : the journal of infectious disease dynamics, Vol. 3, H. 2. pp. 109-118.

Coulibaly, J. T. and Knopp, S. and N'Guessan N. A., and Silué, K. D. and Fürst, T. and Lohourignon, L. K. and Brou, J. K. and N'gbesso Y. K., and Vounatsou, P. and N'Goran E. K., and Utzinger, J.. (2011) Accuracy of urine circulating cathodic antigen (CCA) test for Schistosoma mansoni diagnosis in different settings of Côte d'Ivoire. PLoS neglected tropical diseases, Vol. 5, H. 11 , e1384.

Durán Pacheco G., and Christen, A. and Arnold, B. and Hattendorf, J. and Colford, J. M. and Smith, T. A. and Mäusezahl, D.. (2011) Reporting diarrhoea through a vernacular term in Quechua-speaking settings of rural Bolivia. Journal of health, population and nutrition, Vol. 29, H. 6. pp. 552-559.

Gaida, A. and Becker, M. M. and Schmid, C. D. and Buhlmann, T. and Louis, E. J. and Beck, H. P.. (2011) Cloning of the repertoire of individual Plasmodium falciparum var genes using Transformation Associated Recombination (TAR). PLoS ONE, Vol. 6, H. 3 , e17782.

Gosoniu, L. and Vounatsou, P.. (2011) Non-stationary partition modeling of geostatistical data for malaria risk mapping. Journal of applied statistics , 38 (1). pp. 3-13.

Hürlimann, E. and Schur, N. and Boutsika, K. and Stensgaard, A. S. and Laserna de Himpsl M., and Ziegelbauer, K. and Laizer, N. and Camenzind, L. and Di Pasquale A., and Ekpo, U. F. and Simoonga, C. and Mushinge, G. and Saarnak, C. F. and Utzinger, J. and Kristensen, T. K. and Vounatsou, P.. (2011) Toward an open-access global database for mapping, control, and surveillance of neglected tropical diseases. PLoS neglected tropical diseases, Vol. 5, H. 12 , e1404.

Idindili, B. and Omari, M. and Rumisha, S. F. and Mugusi, F. and Tanner, M.. (2011) HIV/AIDS clinical manifestations and their implication for patient clinical staging in resource limited settings in Tanzania. The open AIDS journal, Vol. 5. pp. 9-16.

Imhof, A. and Brunner, P. and Marincek, N. and Briel, M. and Schindler, C. and Rasch, H. and Macke, H. R. and Rochlitz, C. and Muller-Brand J., and Walter, M. A.. (2011) Response, survival, and long-term toxicity after therapy with the radiolabeled somatostatin analogue [90Y-DOTA]-TOC in metastasized neuroendocrine cancers. Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 29, H. 17. pp. 2416-2423.

Jehn, M. and Schmidt-Trucksass A., and Meyer, A. and Schindler, C. and Tamm, M. and Stolz, D.. (2011) Association of daily physical activity volume and intensity with COPD severity. Respiratory medicine, Vol. 105, H. 12. pp. 1846-1852.

Killeen, G. F. and Chitnis, N. and Moore, S. J. and Okumu, F. O.. (2011) Target product profile choices for intra-domiciliary malaria vector control pesticide products : repel or kill? Malaria journal, Vol. 10 , 207.

Kloeckener-Gruissem B., and Barthelmes, D. and Labs, S. and Schindler, C. and Kurz-Levin M., and Michels, S. and Fleischhauer, J. and Berger, W. and Sutter, F. and Menghini, M.. (2011) Genetic association with response to intravitreal ranibizumab in patients with neovascular AMD. Investigative ophthalmology & visual science, Vol. 52, H. 7. pp. 4694-4702.

Koepfli, Cristian and Schoepflin, Sonja and Bretscher, Michael and Lin, Enmoore and Kiniboro, Benson and Zimmerman, Peter A. and Siba, Peter and Smith, Thomas A. and Mueller, Ivo and Felger, Ingrid. (2011) How much remains undetected? : probability of molecular detection of human Plasmodia in the field. PLoS ONE, 6 (4). e19010.

Kumru, H. and Stetkarova, I. and Schindler, C. and Vidal, J. and Kofler, M.. (2011) Neurophysiological evidence for muscle tone reduction by intrathecal baclofen at the brainstem level. Clinical neurophysiology : official journal of the International Federation of Clinical Neurophysiology, Vol. 122, H. 6. pp. 1229-1237.

Machault, V. and Vignolles, C. and Borchi, F. and Vounatsou, P. and Pages, F. and Briolant, S. and Lacaux, J. P. and Rogier, C.. (2011) The use of remotely sensed environmental data in the study of malaria. Geospatial health, Vol. 5, H. 2. pp. 151-168.

Maire, N. and Shillcutt, S. D. and Walker, D. G. and Tediosi, F. and Smith, T. A.. (2011) Cost-effectiveness of the introduction of a pre-erythrocytic malaria vaccine into the expanded program on immunization in Sub-Saharan Africa : analysis of uncertainties using a stochastic individual-based simulation model of Plasmodium falciparum malaria. Value in health : the journal of the International Society for Pharmacoeconomics and Outcomes Research, Vol. 14, H. 8. pp. 1028-1038.

Minja, Happiness and Nsanzabana, Christian and Maure, Christine and Hoffmann, Axel and Rumisha, Susan and Ogundahunsi, Olumide and Zicker, Fabio and Tanner, Marcel and Launois, Pascal. (2011) Impact of health research capacity strengthening in low- and middle-income countries : the case of WHO/TDR programmes. PLoS neglected tropical diseases, Vol. 5, H. 10 , e1351.

Muehlbauer, T. and Schindler, C.. (2011) Relationship between starting and finishing position in short track speed skating races. European journal of sport science : the official journal of the European College of Sport Science, Vol. 11, H. 4. pp. 225-230.

Musenge, E. and Vounatsou, P. and Kahn, K.. (2011) Space-time confounding adjusted determinants of child HIV/TB mortality for large zero-inflated data in rural South Africa. Spatial and spatio-temporal epidemiology, Vol. 2, H. 4. pp. 205-217.

Noveanu, Markus and Pargger, Hans and Breidthardt, Tobias and Reichlin, Tobias and Schindler, Christian and Heise, Antje and Schoenenberger, Ronald and Manndorff, Patricia and Siegemund, Martin and Mebazaa, Alexandre and Marsch, Stephan and Mueller, Christian. (2011) Use of B-type natriuretic peptide in the management of hypoxaemic respiratory failure. European journal of heart failure, Vol. 13, H. 2. pp. 154-162.

Pjanic, M. and Pjanic, P. and Schmid, C. and Ambrosini, G. and Gaussin, A. and Plasari, G. and Mazza, C. and Bucher, P. and Mermod, N.. (2011) Nuclear factor I revealed as family of promoter binding transcription activators. BMC genomics, Vol. 12, H. 1. p. 181.

Rohner, Andreas and Brinkert, Miriam and Kawel, Nadine and Buechel, Ronny R. and Leibundgut, Gregor and Grize, Leticia and Kühne, Michael and Bremerich, Jens and Kaufmann, Beat A. and Zellweger, Michael J. and Buser, Peter and Osswald, Stefan and Handke, Michael. (2011) Functional assessment of the left atrium by real-time three-dimensional echocardiography using a novel dedicated analysis tool : initial validation studies in comparison with computed tomography. European journal of echocardiography : the journal of the European Association of Echocardiography of the European Society of Cardiology, Vol. 12, H. 7. pp. 497-505.

Ross, A. and Maire, N. and Sicuri, E. and Smith, T. and Conteh, L.. (2011) Determinants of the cost-effectiveness of intermittent preventive treatment for malaria in infants and children. PLoS ONE, Vol. 6, H. 4 , e18391.

Rudin, Diana and Grize, Leticia and Schindler, Christian and Marsch, Stephan and Rüegg, Stephan and Sutter, Raoul. (2011) High prevalence of nonconvulsive and subtle status epilepticus in an ICU of a tertiary care center: a three-year observational cohort study. Epilepsy Research, 96 (1-2). pp. 140-150.

Sartorius, B. and Kahn, K. and Collinson, M. A. and Vounatsou, P. and Tollman, S. M.. (2011) Survived infancy but still vulnerable : spatial-temporal trends and risk factors for child mortality in the Agincourt rural sub-district, South Africa, 1992-2007. Geospatial health, Vol. 5, H. 2. pp. 285-295.

Sayasone, S. and Mak, T. K. and Vanmany, M. and Rasphone, O. and Vounatsou, P. and Utzinger, J. and Akkhavong, K. and Odermatt, P.. (2011) Helminth and intestinal protozoa infections, multiparasitism and risk factors in Champasack Province, Lao People's Democratic Republic. PLoS neglected tropical diseases, Vol. 5, H. 4 , e1037.

Schaetti, C. and Chaignat, C. L. and Hutubessy, R. and Khatib, A. M. and Ali, S. M. and Schindler, C. and Weiss, M. G.. (2011) Social and cultural determinants of anticipated acceptance of an oral cholera vaccine prior to a mass vaccination campaign in Zanzibar. Human vaccines, Vol. 7, H. 12. pp. 1299-1308.

Schur, N. and Gosoniu, L. and Raso, G. and Utzinger, J. and Vounatsou, P.. (2011) Modelling the geographical distribution of co-infection risk from single-disease surveys. Statistics in medicine, Vol. 30, H. 14. pp. 1761-1767.

Schur, N. and Hürlimann, E. and Garba, A. and Traoré, M. S. and Ndir, O. and Ratard, R. C. and Tchuem Tchuenté L. A., and Kristensen, T. K. and Utzinger, J. and Vounatsou, P.. (2011) Geostatistical model-based estimates of schistosomiasis prevalence among individuals aged. PLoS neglected tropical diseases, Vol. 5, H. 6 , e1194.

Schur, N. and Utzinger, J. and Vounatsou, P.. (2011) Modelling age-heterogeneous Schistosoma haematobium and S. mansoni survey data via alignment factors. Parasites and Vectors, 4 (142).

Smieszek, T. and Balmer, M. and Hattendorf, J. and Axhausen, K. W. and Zinsstag, J. and Scholz, R. W.. (2011) Reconstructing the 2003/2004 H3N2 influenza epidemic in Switzerland with a spatially explicit, individual-based model. BMC infectious diseases, Vol. 11 , 115.

Smith, T. A. and Chitnis, N. and Briët, O. J. and Tanner, M.. (2011) Uses of mosquito-stage transmission-blocking vaccines against Plasmodium falciparum. Trends in parasitology, 27 (5). pp. 190-196.

Soukhathammavong, P. and Odermatt, P. and Sayasone, S. and Vonghachack, Y. and Vounatsou, P. and Hatz, C. and Akkhavong, K. and Keiser, J.. (2011) Efficacy and safety of mefloquine, artesunate, mefloquine-artesunate, tribendimidine, and praziquantel in patients with Opisthorchis viverrini : a randomised, exploratory, open-label, phase 2 trial. The Lancet infectious diseases, 11 (2). pp. 110-118.

Staehelin, K. and Bertoli, S. and Probst, R. and Schindler, C. and Dratva, J. and Stutz, E. Z.. (2011) Gender and hearing Aids : patterns of use and determinants of nonregular use. Ear and hearing : official journal of the American Auditory Society, Vol. 32, H. 6 , e26-e37.

Stensgaard, A. S. and Vounatsou, P. and Onapa, A. W. and Simonsen, P. E. and Pedersen, E. M. and Rahbek, C. and Kristensen, T. K.. (2011) Bayesian geostatistical modelling of malaria and lymphatic filariasis infections in Uganda : predictors of risk and geographical patterns of co-endemicity. Malaria journal, Vol. 10 , 298.

Sutter, Raoul and Fuhr, Peter and Grize, Leticia and Marsch, Stephan and Rüegg, Stephan. (2011) Continuous video-EEG monitoring increases detection rate of nonconvulsive status epilepticus in the ICU. Epilepsia : journal of the International League against Epilepsy, Vol. 52, H. 3. pp. 453-457.

Sutter, Raoul and Tschudin-Sutter, Sarah and Grize, Leticia and Widmer, Andreas F. and Marsch, Stephan and Rüegg, Stephan. (2011) Acute phase proteins and white blood cell levels for prediction of infectious complications in status epilepticus. Critical care, 15 (6). R274.

Szalkowski, A. M. and Schmid, C. D.. (2011) Rapid innovation in ChIP-seq peak-calling algorithms is outdistancing benchmarking efforts. Briefings in bioinformatics, Vol. 12, H. 6. pp. 626-633.

Tegethoff, Marion and Greene, Naomi and Olsen, Jørn and Schaffner, Emmanuel and Meinlschmidt, Gunther. (2011) Stress during Pregnancy and Offspring Pediatric Disease: A National Cohort Study. Environmental Health Perspectives, 119 (11). pp. 1647-1652.

The maIera Consultative Group on Integration Strategies, . (2011) A research agenda for malaria eradication : cross-cutting issues for eradication. PLoS medicine, Vol. 8, H. 1 , e1000404.

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Thoma, D. S. and Jones, A. A. and Dard, M. and Grize, L. and Obrecht, M. and Cochran, D. L.. (2011) Tissue integration of a new titanium-zirconium dental implant : a comparative histologic and radiographic study in the canine. Journal of periodontology, 82 (10). pp. 1453-1461.

Braun, S. and Schindler, C. and Leuzinger, S.. (2010) Use of sap flow measurements to validate stomatal functions for mature beech (Fagus sylvatica) in view of ozone uptake calculations. Environmental pollution : an international journal, Vol. 158, H. 9. pp. 2954-2963.

Briët, O. J. T.. (2010) Comments: Elimination is the act or process of bringing Rc. Malaria journal, Vol. 9 , 213.

Carneiro, I. and Smith, L. and Ross, A. and Roca-Feltrer A., and Greenwood, B. and Schellenberg, J. A. and Smith, T. and Schellenberg, D.. (2010) Intermittent preventive treatment for malaria in infants : a decision-support tool for sub-Saharan Africa. Bulletin de l'Organisation mondiale de la santé = Bulletin of the World Health Organization, Vol. 88, H. 11. pp. 807-814.

Chitnis, N. and Schapira, A. and Smith, T. and Steketee, R.. (2010) Comparing the effectiveness of Malaria vector-control interventions through a mathematical model. American journal of tropical medicine and hygiene, 83 (2). pp. 230-240.

Deubelbeiss, U. and Gemperli, A. and Schindler, C. and Baty, F. and Brutsche, M. H.. (2010) Prevalence of sarcoidosis in Switzerland is associated with environmental factors. The European respiratory journal, 35 (5). pp. 1088-1097.

Duthaler, U. and Smith, T. A. and Keiser, J.. (2010) In vivo and in vitro sensitivity of Fasciola hepatica to combinations of triclabendazole and artesunate, artemether or OZ78. Antimicrobial agents and chemotherapy : AAC, Vol. 54, H. 11. pp. 4596-4604.

Gosoniu, L. and Veta, A. M. and Vounatsou, P.. (2010) Bayesian geostatistical modeling of Malaria Indicator Survey data in Angola. PLoS ONE, Vol. 5, H. 3 , e9322.

Grize, L. and Bringolf-Isler B., and Martin, E. and Braun-Fahrländer C., . (2010) Trend in active transportation to school among Swiss school children and its associated factors : three cross-sectional surveys 1994, 2000 and 2005. International journal of behavioral nutrition and physical activity, Vol. 7 , 28.

Gsell, A. and Knobel, D. L. and Cleaveland, S. and Kazwala, R. R. and Vounatsou, P. and Zinsstag, J.. (2010) Features of domestic dog demography relevant to rabies control planning in Tanzania. Journal of veterinary behavior : clinical applications and research, Vol. 4, H. 2. p. 63.

Hastings, I. M. and Nsanzabana, C. and Smith, T. A.. (2010) A comparison of methods to detect and quantify the markers of antimalarial drug resistance. American journal of tropical medicine and hygiene, Vol. 83, H. 3. pp. 489-495.

Hebestreit, H. and Kieser, S. and Junge, S. and Ballmann, M. and Hebestreit, A. and Schindler, C. and Schenk, T. and Posselt, H.-G. and Kriemler, S.. (2010) Long-term effects of a partially supervised conditioning programme in cystic fibrosis. The European respiratory journal, 35 (3). pp. 578-583.

Hug, K. and Grize, L. and Seidler, A. and Kaatsch, P. and Schuz, J.. (2010) Parental occupational exposure to extremely low frequency magnetic fields and childhood cancer: a German case-control study. American journal of epidemiology, Vol. 171, No. 1. pp. 27-35.

Keiser, J. and N'Guessan N. A., and Adoubryn, K. D. and Silué, K. D. and Vounatsou, P. and Hatz, C. and Utzinger, J. and N'Goran E. K., . (2010) Efficacy and safety of mefloquine, artesunate, mefloquine-artesunate, and praziquantel against Schistosoma haematobium: randomized, exploratory open-label trial. Clinical Infectious Diseases, Vol. 50, H. 9. pp. 1205-1213.

Leibundgut, G. and Rohner, A. and Grize, L. and Bernheim, A. and Kessel-Schaefer A., and Bremerich, J. and Zellweger, M. and Buser, P. and Handke, M.. (2010) Dynamic assessment of right ventricular volumes and function by real-time three-dimensional echocardiography : a comparison study with magnetic resonance imaging in 100 adult patients. Journal of the American Society of Echocardiography, Vol. 23, H. 2. pp. 116-126.

Marfurt, J. and Smith, T. A. and Hastings, I. M. and Müller, I. and Sie, A. and Oa, O. and Baisor, M. and Reeder, J. C. and Beck, H. P. and Genton, B.. (2010) Plasmodium falciparum resistance to anti-malarial drugs in Papua New Guinea: evaluation of a community-based approach for the molecular monitoring of resistance. Malaria Journal, Vol. 9 , 8.

Matthys, B. and Koudou, B. G. and N'Goran E. K., and Vounatsou, P. and Gosoniu, L. and Koné, M. and Cissé, G. and Utzinger, J.. (2010) Spatial dispersion and characterisation of mosquito breeding habitats in urban vegetable-production areas of Abidjan, Côte d'Ivoire. Annals of Tropical Medicine and Parasitology, Vol. 104, H. 8. pp. 649-666.

Mühlbauer, T. and Panzer, S. and Schindler, C.. (2010) Pacing pattern and speed skating performance in competitive long-distance events. Journal of strength and conditioning research : the official journal of the National Strength and Conditioning Association, Vol. 24, H. 1. pp. 114-119.

Mühlbauer, T. and Schindler, C. and Panzer, S.. (2010) Pacing and sprint performance in speed skating during a competitive season. International journal of sports physiology and performance : IJSPP, Vol. 5, H. 2. pp. 165-176.

Mühlbauer, T. and Schindler, C. and Widmer, A.. (2010) Pacing pattern and performance during the 2008 Olympic rowing regatta. European journal of sport science : the official journal of the European College of Sport Science, Vol. 10, H. 5. pp. 291-296.

Nsanzabana, C. and Hastings, I. M. and Marfurt, J. and Müller, I. and Baea, K. and Rare, L. and Schapira, A. and Felger, I. and Betschart, B. and Smith, T. A. and Beck, H. P. and Genton, B.. (2010) Quantifying the evolution and impact of antimalarial drug resistance: drug use, spread of resistance, and drug failure over a 12-year period in Papua New Guinea. Journal of infectious diseases, Vol. 201, no. 3. pp. 435-443.

Okumu, F. O. and Govella, N. J. and Moore, S. J. and Chitnis, N. and Killeen, G. F.. (2010) Potential benefits, limitations and target product-profiles of odor-baited mosquito traps for malaria control in Africa. PLoS ONE, Vol. 5, H. 7 , e11573.

Penny, M. A. and Saurina, J. and Keller, I. and Jenni, L. and Bauer, H. G. and Fiedler, W. and Zinsstag, J.. (2010) Transmission dynamics of highly pathogenic avian influenza at lake constance (Europe) during the outbreak of winter 2005-2006. EcoHealth, Vol. 7, H. 3. pp. 275-282.

Riedel, N. and Vounatsou, P. and Miller, J. M. and Gosoniu, L. and Chizema-Kawesha E., and Mukonka, V. and Steketee, R. W.. (2010) Geographical patterns and predictors of malaria risk in Zambia: Bayesian geostatistical modelling of the 2006 Zambia national malaria indicator survey (ZMIS). Malaria Journal, Vol. 9 , 37.

Rohner, F. and Zimmermann, M. B. and Amon, R. J. and Vounatsou, P. and Tschannen, A. B. and N'Goran E. K., and Nindjin, C. and Cacou, M. C. and Te-Bonle M. D., and Aka, H. and Sess, D. E. and Utzinger, J. and Hurrell, R. F.. (2010) In a randomized controlled trial of iron fortification, anthelmintic treatment, and intermittent preventive treatment of malaria for anemia control in Ivorian children, only anthelmintic treatment shows modest benefit. Journal of Nutrition, Vol. 140, H. 3. pp. 635-641.

Ross, A. and Smith, T.. (2010) Interpreting malaria age-prevalence and incidence curves : a simulation study of the effects of different types of heterogeneity. Malaria Journal, Vol. 9 , 132.

Russell, T. L. and Lwetoijera, D. W. and Maliti, D. and Chipwaza, B. and Kihonda, J. and Charlwood, J. D. and Smith, T. A. and Lengeler, C. and Mwanyangala, M. A. and Nathan, R. and Knols, B. G. and Takken, W. and Killeen, G. F.. (2010) Impact of promoting longer-lasting insecticide treatment of bed nets upon malaria transmission in a rural Tanzanian setting with pre-existing high coverage of untreated nets. Malaria Journal, Vol. 9 , 187.

Schmid, C. D. and Bucher, P.. (2010) MER41 repeat sequences contain inducible STAT1 binding sites. PLoS ONE, Vol. 5, H. 7 , e11425.

Yang, G. J. and Gao, Q. and Zhou, S. S. and Malone, J. B. and McCarroll, J. C. and Tanner, M. and Vounatsou, P. and Bergquist, R. and Utzinger, J. and Zhou, X. N.. (2010) Mapping and predicting malaria transmission in the People's Republic of China, using integrated biology-driven and statistical models. Geospatial health, Vol. 5, H. 1. pp. 11-22.

Yang, G. J. and Utzinger, J. and Lv, S. and Qian, Y. J. and Li, S. Z. and Wang, Q. and Bergquist, R. and Vounatsou, P. and Li, W. and Yang, K. and Zhou, X. N.. (2010) The regional network for Asian schistosomiasis and other helminth zoonoses (RNAS+) : target diseases in face of climate change. Advances in parasitology, Vol. 73. pp. 101-135.

Bendik, C. Falconnier and Keller, U. and Moriconi, N. and Gessler, A. and Schindler, Ch and Zulewski, H. and Ruiz, J. and Puder, J. J.. (2009) Training in flexible intensive insulin therapy improves quality of life, decreases the risk of hypoglycaemia and ameliorates poor metabolic control in patients with type 1 diabetes. Diabetes research and clinical practice : affiliated with the International Diabetes Federation and published in collaboration with the Western Pacific Region of IDF, Vol. 83, H. 3. pp. 327-333.

Bongfen, S. E. and Ntsama, P. M. and Offner, S. and Smith, T. and Felger, I. and Tanner, M. and Alonso, P. and Nebie, I. and Romero, J. F. and Silvie, O. and Torgler, R. and Corradin, G.. (2009) The N-terminal domain of Plasmodium falciparum circumsporozoite protein represents a target of protective immunity. Vaccine : the official journal of the International Society for Vaccines, 27 (2). pp. 328-335.

Cochran, D. L. and Bosshardt, D. D. and Grize, L. and Higginbottom, F. L. and Jones, A. A. and Jung, R. E. and Wieland, M. and Dard, M.. (2009) Bone response to loaded implants with non-matching implant-abutment diameters in the canine mandible. Journal of Periodontology, Vol. 80, H. 4. pp. 609-617.

Dongus, S. and Nyika, D. and Kannady, K. and Mtasiwa, D. and Mshinda, H. and Gosoniu, L. and Drescher, A. W. and Fillinger, U. and Tanner, M. and Killeen, G. F. and Castro, M. C.. (2009) Urban agriculture and Anopheles habitats in Dar es Salaam, Tanzania. Geospatial health, Vol. 3, H. 2. pp. 189-210.

Durr, S. and Mindekem, R. and Kaninga, Y. and Doumagoum, M. D. and Meltzer, M. I. and Vounatsou, P. and Zinsstag, J.. (2009) Effectiveness of dog rabies vaccination programmes: comparison of owner-charged and free vaccination campaigns. Epidemiology and infection, Vol. 137, H. 11. pp. 1558-1567.

Flueck, C. and Frank, G. and Smith, T. and Jafarshad, A. and Nebie, I. and Sirima, S. B. and Olugbile, S. and Alonso, P. and Tanner, M. and Druilhe, P. and Felger, I. and Corradin, G.. (2009) Evaluation of two long synthetic merozoite surface protein 2 peptides as malaria vaccine candidates. Vaccine : the official journal of the International Society for Vaccines, 27 (20). pp. 2653-2661.

Geissbühler, Y. and Kannady, K. and Chaki, P. P. and Emidi, B. and Govella, N. J. and Mayagaya, V. and Kiama, M. and Mtasiwa, D. and Mshinda, H. and Lindsay, S. W. and Tanner, M. and Fillinger, U. and de Castro M. C., and Killeen, G. F.. (2009) Microbial larvicide application by a large-scale, community-based program reduces malaria infection prevalence in urban Dar es Salaam, Tanzania. PLoS ONE, Vol. 4, H. 3 , e5107.

Gosoniu, L. and Vounatsou, P. and Sogoba, N. and Maire, N. and Smith, T.. (2009) Mapping malaria risk in West Africa using a Bayesian nonparametric non-stationary model. Computational statistics & data analysis : the official journal of IASC, ISI, Vol. 53, H. 9. pp. 3358-3371.

Haller, Sven and Borgwardt, Stefan J. and Schindler, Christian and Aston, Jacqueline and Radue, Ernst-Wilhelm and Riecher-Rössler, Anita. (2009) Can Cortical Thickness Asymmetry Analysis Contribute to Detection of At-Risk Mental State and First-Episode Psychosis?: A Pilot Study. Radiology, 250 (1). pp. 212-221.

Iten, Fabienne and Muller, Beat and Schindler, Christian and Rasch, Helmut and Rochlitz, Christoph and Oertli, Daniel and Maecke, Helmut R. and Muller-Brand, Jan and Walter, Martin A.. (2009) [(90)Yttrium-DOTA]-TOC response is associated with survival benefit in iodine-refractory thyroid cancer: long-term results of a phase 2 clinical trial. Cancer, 115 (10). pp. 2052-2062.

Martin, F. J. and Gomez, M. I. and Wetzel, D. M. and Memmi, G. and O'Seaghdha M., and Soong, G. and Schindler, C. and Prince, A.. (2009) Staphylococcus aureus activates type I IFN signaling in mice and humans through the Xr repeated sequences of protein A. Journal of Clinical Investigation, Vol. 119, H. 7. pp. 1931-1939.

Michelozzi, Paola and Accetta, Gabriele and De Sario, Manuela and D'Ippoliti, Daniela and Marino, Claudia and Baccini, Michela and Biggeri, Annibale and Anderson, H. Ross and Katsouyanni, Klea and Ballester, Ferran and Bisanti, Luigi and Cadum, Ennio and Forsberg, Bertil and Forastiere, Francesco and Goodman, Patrick G. and Hojs, Ana and Kirchmayer, Ursula and Medina, Sylvia and Paldy, Anna and Schindler, Christian and Sunyer, Jordi and Perucci, Carlo A.. (2009) High temperature and hospitalizations for cardiovascular and respiratory causes in 12 European cities. American journal of respiratory and critical care medicine, Vol. 179, H. 5. pp. 383-389.

Müller, Ivo and Genton, Blaise and Rare, Lawrence and Kiniboro, Benson and Kastens, Will and Zimmerman, Peter and Kazura, James and Alpers, Michael and Smith, Thomas A.. (2009) Three different Plasmodium species show similar patterns of clinical tolerance of malaria infection. Malaria Journal, 8. p. 158.

Müller, Ivo and Widmer, Simone and Michel, Daniela and Maraga, Seri and McNamara, David T. and Kiniboro, Benson and Sie, Albert and Smith, Thomas A. and Zimmerman, Peter A.. (2009) High sensitivity detection of Plasmodium species reveals positive correlations between infections of different species, shifts in age distribution and reduced local variation in Papua New Guinea. Malaria Journal, 8 (41).

Pluess, Bianca and Mueller, Ivo and Levi, Damien and King, Graham and Smith, Thomas A. and Lengeler, Christian. (2009) Malaria - a major health problem within an oil palm plantation around Popondetta, Papua New Guinea. Malaria Journal, 8. p. 56.

Plumlee, C. R. and Lee, C. and Beg, A. A. and Decker, T. and Shuman, H. A. and Schindler, C.. (2009) Interferons direct an effective innate response to Legionella pneumophila infection. Journal of biological chemistry, Vol. 284, H. 44. pp. 30058-30066.

Raso, Giovanna and Silué, Kigbafori D. and Vounatsou, Penelope and Singer, Burton H. and Yapi, Ahoua and Tanner, Marcel and Utzinger, Jürg and N'Goran, Eliézer K.. (2009) Spatial risk profiling of Plasmodium falciparum parasitaemia in a high endemicity area in Côte d'Ivoire. Malaria Journal, Vol. 8 , 252.

Samoli, E. and Zanobetti, A. and Schwartz, J. and Atkinson, R. and Le Tertre A., and Schindler, C. and Perez, L. and Cadum, E. and Pekkanen, J. and Paldy, A. and Touloumi, G. and Katsouyanni, K.. (2009) The temporal pattern of mortality responses to ambient ozone in the APHEA project. Journal of epidemiology & community health, Vol. 63, No. 12. pp. 960-966.

Saxer, Franziska and Widmer, Andreas and Fehr, Jan and Soka, Isaac and Kibatala, Pascience and Urassa, Honorathy and Frei, Reno and Smith, Thomas and Hatz, Christoph. (2009) Benefit of a single preoperative dose of antibiotics in a sub-saharan district hospital: minimal input, massive impact. Annals of surgery : a monthly review of surgical science and practice, Vol. 249, H. 2. pp. 322-326.

Tediosi, F. and Maire, N. and Penny, M. and Studer, A. and Smith, T. A.. (2009) Simulation of the cost-effectiveness of malaria vaccines. Malaria Journal, Vol. 8 , 127.

Vounatsou, P. and Raso, G. and Tanner, M. and N'Goran, E. K. and Utzinger, J.. (2009) Bayesian geostatistical modelling for mapping schistosomiasis transmission. Parasitology, 136 (13). pp. 1695-1705.

Walter, M. A. and Schindler, C. and Christ-Crain, M. and Muller-Brand, J. and Muller, B.. (2009) Different strategies to overcome the effect of carbimazole on high- and low-dose radioiodine therapy: results from continuous dose-effect models. European Journal of Clinical Investigation, 39 (1). pp. 51-57.

Abdullah, Salim and Adazu, Kubaje and Masanja, Honorati and Diallo, Diadier and Hodgson, Abraham and Ilboudo-Sanogo, Edith and Nhacolo, Ariel and Owusu-Agyei, Seth and Thompson, Ricardo and Smith, Thomas and Binka, Fred N.. (2007) Patterns of age-specific mortality in children in endemic areas of sub-Saharan Africa. American journal of tropical medicine and hygiene, 77 (6 Suppl.). pp. 99-105.

Book

Chitnis, N. and Schapira, A. and Smith, D. L. and Smith, T. and Hay, S. I. and Steketee, R.. (2010) Modélisation mathématique pour le contrôle et l'élimination du paludisme. Collection progrès et impact, Nr. 5. Genève.

Chitnis, Nakul and Schapira, Allan and Smith, David L. and Hay, Simon and Smith, Thomas and Steketee, Richard. (2010) Mathematical modelling to support malaria control and elimination. Progress & Impact Series, no. 5. Geneva.

Book Section

Smith, T. and Chitnis, N. and Penny, M.. (2017) Predictive malaria epidemiology : modeling malaria infection dynamics and impact of control interventions. In: Encyclopedia of malaria. New York, pp. 1-10.

Stone, C. M. and Foster, W. A.. (2013) Plant-sugar feeding and vectorial capacity. In: Ecology of parasite-vector interactions. Wageningen, pp. 35-79.

Utzinger, J. and Raso, G. and Steinmann, P. and Zhou, X. N. and Vounatsou, P. and Brooker, S. and N'Goran, E. K.. (2011) Schistosomiasis. In: Encyclopedia of Environmental Health, 5. Amsterdam, pp. 10-19.

Thesis

Multerer, Lea Diana. Design and analysis of trials for mosquito control interventions with contamination. 2021, Doctoral Thesis, University of Basel, Associated Institution, Faculty of Science.

Crowell, Valerie. Predicting the cost-effectiveness of strategies for case management of "plasmodium falciparum" malaria in Sub-Saharan Africa. 2013, Doctoral Thesis, University of Basel, Faculty of Science.

Huho, Bernadette John. Measurement of malaria transmission in Africa : an entomological perspective. 2013, Doctoral Thesis, University of Basel, Faculty of Science.

Lutambi, Angelina M.. Mathematical modelling of mosquito dispersal for malaria vector control. 2013, Doctoral Thesis, University of Basel, Faculty of Science.

Bretscher, Michael. Statistical analysis of "Plasmodium falciparum" infection dynamics. 2012, Doctoral Thesis, University of Basel, Faculty of Science.

Brooks, Alan. Planning for new health interventions for developing countries : an integrated strategy to prepare for malaria vaccines and lessons for future interventions. 2011, Doctoral Thesis, University of Basel, Faculty of Science.

Ross, Amanda. Stochastic models for the consequences of "Plasmodium falciparum" infections in the human host : malaria morbidity, mortality and infectivity. 2008, Doctoral Thesis, University of Basel, Faculty of Science.

Newspaper or Magazine Article

Pothin, E. and Segura, L. and Galactionova, K. and Bohle, L. and Matthys, B. and Briët, O. J. T. and Smith, T. A.. (1 May 2017) A methodology for malaria programme impact evaluation. PeerJ Preprints, 5. e3263v1.

Missoni, E. and Tediosi, F.. (29 July 2014) Oms e copertura universale, il gruppo "Brics" diviso alla meta. Sole 24 Ore Sanità. p. 15.

Other

Okell, L. and Slater, H. and Ghani, A. and Pemberton-Ross, P. and Smith, T. A. and Chitnis, N. and Penny, M. A. and Wenger, E. and Garardin, J. and Maude, R. and Aguas, R. and White, L. and Brady, O. and Hay, S. and Okiro, E. and Kern, S.. (2015) Consensus modelling evidence to support the design of mass drug administration programmes. Malaria Policy Advisory Committee meeting, 16-18 September 2015, Geneva Switzerland, Background document for Session 1. Geneva.