Items where Author is "Schmidt, Ralf"

2020

Jutzi, Daniel and Campagne, Sébastien and Schmidt, Ralf and Reber, Stefan and Mechtersheimer, Jonas and Gypas, Foivos and Schweingruber, Christoph and Colombo, Martino and von Schroetter, Christine and Loughlin, Fionna E. and Devoy, Anny and Hedlund, Eva and Zavolan, Mihaela and Allain, Frédéric H.-T. and Ruepp, Marc-David. (2020) Aberrant interaction of FUS with the U1 snRNA provides a molecular mechanism of FUS induced amyotrophic lateral sclerosis. Nature Communications, 11 (1). p. 6341.

2019

Herrmann, Christina J. and Schmidt, Ralf and Kanitz, Alexander and Artimo, Panu and Gruber, Andreas J. and Zavolan, Mihaela. (2019) PolyASite 2.0: a consolidated atlas of polyadenylation sites from 3' end sequencing. Nucleic acids research, 48 (D1). D174-D179.

2018

Gruber, Andreas J. and Schmidt, Ralf and Ghosh, Souvik and Martin, Georges and Gruber, Andreas R. and van Nimwegen, Erik and Zavolan, Mihaela. (2018) Discovery of physiological and cancer-related regulators of 3' UTR processing with KAPAC. Genome biology, 19 (1). p. 44.

Gruber, Andreas J. and Gypas, Foivos and Riba, Andrea and Schmidt, Ralf and Zavolan, Mihaela. (2018) Terminal exon characterization with TECtool reveals an abundance of cell-specific isoforms. Nature methods, 15 (10). pp. 832-836.

Schmidt, Ralf. To what end? - Computational tools to uncover regulators of pre-mRNA polyadenylation site selection. 2018, Doctoral Thesis, University of Basel, Faculty of Science.

2017

Martin, Georges and Schmidt, Ralf and Gruber, Andreas J. and Ghosh, Souvik and Keller, Walter and Zavolan, Mihaela. (2017) 3' End Sequencing Library Preparation with A-seq2. Journal of Visualized Experiments (128). e56129.

August 2016

Gruber, Andreas J. and Schmidt, Ralf and Gruber, Andreas R. and Martin, Georges and Ghosh, Souvik and Belmadani, Manuel and Keller, Walter and Zavolan, Mihaela. (2016) A comprehensive analysis of 3' end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation. Genome Research, 26 (8). pp. 1145-1159.