Items where Author is "Fidelis, Krzysztof"

2023

Kryshtafovych, Andriy and Antczak, Maciej and Szachniuk, Marta and Zok, Tomasz and Kretsch, Rachael C. and Rangan, Ramya and Pham, Phillip and Das, Rhiju and Robin, Xavier and Studer, Gabriel and Durairaj, Janani and Eberhardt, Jerome and Sweeney, Aaron and Topf, Maya and Schwede, Torsten and Fidelis, Krzysztof and Moult, John. (2023) New prediction categories in CASP15. Proteins: Structure, Function, and Bioinformatics .

Alexander, Leila T. and Durairaj, Janani and Kryshtafovych, Andriy and Abriata, Luciano A. and Bayo, Yusupha and Bhabha, Gira and Breyton, Cécile and Caulton, Simon G. and Chen, James and Degroux, Séraphine and Ekiert, Damian C. and Erlandsen, Benedikte S. and Freddolino, Peter L. and Gilzer, Dominic and Greening, Chris and Grimes, Jonathan M. and Grinter, Rhys and Gurusaran, Manickam and Hartmann, Marcus D. and Hitchman, Charlie J. and Keown, Jeremy R. and Kropp, Ashleigh and Kursula, Petri and Lovering, Andrew L. and Lemaitre, Bruno and Lia, Andrea and Liu, Shiheng and Logotheti, Maria and Lu, Shuze and Markússon, Sigurbjörn and Miller, Mitchell D. and Minasov, George and Niemann, Hartmut H. and Opazo, Felipe and Phillips, George N. and Davies, Owen R. and Rommelaere, Samuel and Rosas-Lemus, Monica and Roversi, Pietro and Satchell, Karla and Smith, Nathan and Wilson, Mark A. and Wu, Kuan-Lin and Xia, Xian and Xiao, Han and Zhang, Wenhua and Zhou, Z. Hong and Fidelis, Krzysztof and Topf, Maya and Moult, John and Schwede, Torsten. (2023) Protein target highlights in CASP15: Analysis of models by structure providers. Proteins: Structure, Function, and Bioinformatics . Online ahead of print..

2021

Kryshtafovych, Andriy and Schwede, Torsten and Topf, Maya and Fidelis, Krzysztof and Moult, John. (2021) Critical assessment of methods of protein structure prediction (CASP)-Round XIV. Proteins: Structure, Function, and Bioinformatics , 89 (12). pp. 1607-1617.

Kryshtafovych, Andriy and Moult, John and Billings, Wendy M. and Della Corte, Dennis and Fidelis, Krzysztof and Kwon, Sohee and Olechnovič, Kliment and Seok, Chaok and Venclovas, Česlovas and Won, Jonghun and Casp-Covid participants, . (2021) Modeling SARS-CoV-2 proteins in the CASP-commons experiment. Proteins: Structure, Function, and Bioinformatics . pp. 1-10.

Alexander, Leila T. and Lepore, Rosalba and Kryshtafovych, Andriy and Adamopoulos, Athanassios and Alahuhta, Markus and Arvin, Ann M. and Bomble, Yannick J. and Böttcher, Bettina and Breyton, Cécile and Chiarini, Valerio and Chinnam, Naga Babu and Chiu, Wah and Fidelis, Krzysztof and Grinter, Rhys and Gupta, Gagan D. and Hartmann, Marcus D. and Hayes, Christopher S. and Heidebrecht, Tatjana and Ilari, Andrea and Joachimiak, Andrzej and Kim, Youngchang and Linares, Romain and Lovering, Andrew L. and Lunin, Vladimir V. and Lupas, Andrei N. and Makbul, Cihan and Michalska, Karolina and Moult, John and Mukherjee, Prasun K. and Nutt, William Sam and Oliver, Stefan L. and Perrakis, Anastassis and Stols, Lucy and Tainer, John A. and Topf, Maya and Tsutakawa, Susan E. and Valdivia-Delgado, Mauricio and Schwede, Torsten. (2021) Target highlights in CASP14: analysis of models by structure providers. Proteins: Structure, Function, and Bioinformatics . pp. 1-26.

2019

Kryshtafovych, Andriy and Schwede, Torsten and Topf, Maya and Fidelis, Krzysztof and Moult, John. (2019) Critical assessment of methods of protein structure prediction (CASP)-Round XIII. Proteins, 87 (12). pp. 1011-1020.

Lepore, Rosalba and Kryshtafovych, Andriy and Alahuhta, Markus and Veraszto, Harshul A. and Bomble, Yannick J. and Bufton, Joshua C. and Bullock, Alex N. and Caba, Cody and Cao, Hongnan and Davies, Owen R. and Desfosses, Ambroise and Dunne, Matthew and Fidelis, Krzysztof and Goulding, Celia W. and Gurusaran, Manickam and Gutsche, Irina and Harding, Christopher J. and Hartmann, Marcus D. and Hayes, Christopher S. and Joachimiak, Andrzej and Leiman, Petr G. and Loppnau, Peter and Lovering, Andrew L. and Lunin, Vladimir V. and Michalska, Karolina and Mir-Sanchis, Ignacio and Mitra, Alok and Moult, John and Phillips, George N. and Pinkas, Daniel M. and Rice, Phoebe A. and Tong, Yufeng and Topf, Maya and Walton, Jonathan D. and Schwede, Torsten. (2019) Target highlights in CASP13: Experimental target structures through the eyes of their authors. Proteins: Structure, Function, and Bioinformatics , 87 (12). pp. 1037-1057.

2018

Moult, John and Fidelis, Krzysztof and Kryshtafovych, Andriy and Schwede, Torsten. (2018) A tribute to Anna Tramontano (1957-2017). Proteins: Structure, Function, and Bioinformatics , 86 (1). pp. 5-6.

Moult, John and Fidelis, Krzysztof and Kryshtafovych, Andriy and Schwede, Torsten and Tramontano, Anna. (2018) Critical assessment of methods of protein structure prediction (CASP) - Round XII. Proteins: Structure, Function, and Bioinformatics , 86 (1). pp. 7-15.

Kryshtafovych, Andriy and Monastyrskyy, Bohdan and Fidelis, Krzysztof and Moult, John and Schwede, Torsten and Tramontano, Anna. (2018) Evaluation of the template-based modeling in CASP12. Proteins, 86 Suppl 1. pp. 321-334.

Kryshtafovych, Andriy and Albrecht, Reinhard and Baslé, Arnaud and Bule, Pedro and Caputo, Alessandro T. and Carvalho, Ana Luisa and Chao, Kinlin L. and Diskin, Ron and Fidelis, Krzysztof and Fontes, Carlos M. G. A. and Fredslund, Folmer and Gilbert, Harry J. and Goulding, Celia W. and Hartmann, Marcus D. and Hayes, Christopher S. and Herzberg, Osnat and Hill, Johan C. and Joachimiak, Andrzej and Kohring, Gert-Wieland and Koning, Roman I. and Lo Leggio, Leila and Mangiagalli, Marco and Michalska, Karolina and Moult, John and Najmudin, Shabir and Nardini, Marco and Nardone, Valentina and Ndeh, Didier and Nguyen, Thanh-Hong and Pintacuda, Guido and Postel, Sandra and van Raaij, Mark J. and Roversi, Pietro and Shimon, Amir and Singh, Abhimanyu K. and Sundberg, Eric J. and Tars, Kaspars and Zitzmann, Nicole and Schwede, Torsten. (2018) Target highlights from the first post-PSI CASP experiment (CASP12, May-August 2016). Proteins: Structure, Function, and Bioinformatics , 86 (1). pp. 27-50.

2017

Kryshtafovych, Andriy and Monastyrskyy, Bohdan and Fidelis, Krzysztof and Schwede, Torsten and Tramontano, Anna. (2017) Assessment of model accuracy estimations in CASP12. Proteins, 86 (S1). pp. 345-360.

September 2016

Moult, John and Fidelis, Krzysztof and Kryshtafovych, Andriy and Schwede, Torsten and Tramontano, Anna. (2016) Critical assessment of methods of protein structure prediction (CASP) - progress and new directions in Round XI. Proteins, 84 (1). pp. 4-14.

2016

Moult, John and Fidelis, Krzysztof and Kryshtafovych, Andriy and Schwede, Torsten and Tramontano, Anna. (2016) Critical assessment of methods of protein structure prediction: Progress and new directions in round XI. Proteins: Structure, Function, and Bioinformatics , 84 (1). pp. 4-14.

Kryshtafovych, Andriy and Barbato, Alessandro and Monastyrskyy, Bohdan and Fidelis, Krzysztof and Schwede, Torsten and Tramontano, Anna. (2016) Methods of model accuracy estimation can help selecting the best models from decoy sets: assessment of model accuracy estimations in CASP11. Proteins: Structure, Function, and Bioinformatics , 84 (1). pp. 349-369.

2014

Kryshtafovych, Andriy and Barbato, Alessandro and Fidelis, Krzysztof and Monastyrskyy, Bohdan and Schwede, Torsten and Tramontano, Anna. (2014) Assessment of the assessment : evaluation of the model quality estimates in CASP10. Proteins, Vol. 82, Suppl. S2. pp. 112-126.

Moult, John and Fidelis, Krzysztof and Kryshtafovych, Andriy and Schwede, Torsten and Tramontano, Anna. (2014) Critical assessment of methods of protein structure prediction (CASP) - round X. Proteins, Vol. 82, Suppl. S2 , S. 1–6.

2006

Berman, Helen M. and Burley, Stephen K. and Chiu, Wah and Sali, Andrej and Adzhubei, Alexei and Bourne, Philip E. and Bryant, Stephen H. and Dunbrack, Roland L. and Fidelis, Krzysztof and Frank, Joachim and Godzik, Adam and Henrick, Kim and Joachimiak, Andrzej and Heymann, Bernard and Jones, David and Markley, John L. and Moult, John and Montelione, Gaetano T. and Orengo, Christine and Rossmann, Michael G. and Rost, Burkhard and Saibil, Helen and Schwede, Torsten and Standley, Daron M. and Westbrook, John D.. (2006) Outcome of a workshop on archiving structural models of biological macromolecules. Structure: with folding and design, Vol. 14, H. 8. pp. 1211-1217.