Items where Author is "Aebersold, Ruedi"
Number of items: 17.
Schmidt, Alexander and Kochanowski, Karl and Vedelaar, Silke and Ahrné, Erik and Volkmer, Benjamin and Callipo, Luciano and Knoops, Kèvin and Bauer, Manuel and Aebersold, Ruedi and Heinemann, Matthias. (2016) The quantitative and condition-dependent Escherichia coli proteome. Nature biotechnology, 34 (1). pp. 104-110.
Subasic, Deni and Brümmer, Anneke and Wu, Yibo and Pinto, Sérgio Morgado and Imig, Jochen and Keller, Martin and Jovanovic, Marko and Lightfoot, Helen Louise and Nasso, Sara and Götze, Sandra and Brunner, Erich and Hall, Jonathan and Aebersold, Ruedi and Zavolan, Mihaela and Hengartner, Michael. (2015) Cooperative target mRNA destabilization and translation inhibition by miR-58 microRNA family in C. elegans. Genome research, 25 (11). pp. 1680-1691.
Sjöström, Martin and Ossola, Reto and Breslin, Thomas and Rinner, Oliver and Malmström, Lars and Schmidt, Alexander and Aebersold, Ruedi and Malmström, Johan and Niméus, Emma. (2015) A Combined Shotgun and Targeted Mass Spectrometry Strategy for Breast Cancer Biomarker Discovery. Journal of Proteome Research, 14 (7). pp. 2807-2818.
Fengos, Georgios and Schmidt, Alexander and Martin, Katrin and Fluri, Erika and Aebersold, Ruedi and Iber, Dagmar and Pertz, Olivier. (2014) Spatial proteomic and phospho-proteomic organization in three prototypical cell migration modes. Proteome science, Vol. 12. S. 23.
Picotti, Paola and Clément-Ziza, Mathieu and Lam, Henry and Campbell, David S. and Schmidt, Alexander and Deutsch, Eric W. and Röst, Hannes and Sun, Zhi and Rinner, Oliver and Reiter, Lukas and Shen, Qin and Michaelson, Jacob J. and Frei, Andreas and Alberti, Simon and Kusebauch, Ulrike and Wollscheid, Bernd and Moritz, Robert L. and Beyer, Andreas and Aebersold, Ruedi. (2013) A complete mass-spectrometric map of the yeast proteome applied to quantitative trait analysis. Nature, Vol. 494, H. 7436. S. 266-270.
Gunaratne, Jayantha and Schmidt, Alexander and Quandt, Andreas and Neo, Suat Peng and Saraç, Omer Sinan and Gracia, Tannia and Loguercio, Salvatore and Ahrné, Erik and Xia, Rachel Li Hai and Tan, Keng Hwa and Lössner, Christopher and Bähler, Jürg and Beyer, Andreas and Blackstock, Walter and Aebersold, Ruedi. (2013) Extensive mass spectrometry-based analysis of the fission yeast proteome : the Schizosaccharomyces pombe Peptide Atlas. Molecular & cellular proteomics, Vol. 12, H. 6. S. 1741-1751.
von Meyenn, Ferdinand and Porstmann, Thomas and Gasser, Emanuel and Selevsek, Nathalie and Schmidt, Alexander and Aebersold, Ruedi and Stoffel, Markus. (2013) Glucagon-Induced Acetylation of Foxa2 Regulates Hepatic Lipid Metabolism. Cell metabolism, Vol. 17, H. 3. S. 436-447.
Berti, Matteo and Chaudhuri, Arnab Ray and Thangavel, Saravanabhavan and Gomathinayagam, Shivasankari and Kenig, Sasa and Vujanovic, Marko and Odreman, Federico and Glatter, Timo and Graziano, Simona and Mendoza-Maldonado, Ramiro and Marino, Francesca and Lucic, Bojana and Biasin, Valentina and Gstaiger, Matthias and Aebersold, Ruedi and Sidorova, Julia M. and Monnat, Raymond J. and Lopes, Massimo and Vindigni, Alessandro. (2013) Human RECQ1 promotes restart of replication forks reversed by DNA topoisomerase I inhibition. Nature structural & molecular biology, 20. pp. 347-354.
Wong, Catherine C. L. and Cociorva, Daniel and Miller, Christine A. and Schmidt, Alexander and Monell, Craig and Aebersold, Ruedi and Yates, John R.. (2013) Proteomics of Pyrococcus furiosus (Pfu) : Identification of Extracted Proteins by Three Independent Methods. Journal of Proteome Research, Vol. 12, H. 2. S. 763-770.
Stützer, Ina and Selevsek, Nathalie and Esterhazy, Daria and Schmidt, Alexander and Aebersold, Ruedi and Stoffel, Markus. (2013) Systematic proteomic analysis identifies beta-site amyloid precursor protein cleaving enzyme 2 and 1 (BACE2 and BACE1) substrates in pancreatic beta-cells. Journal of biological chemistry, Vol. 288, H. 15. S. 10536-10547.
Hausser, Jean and Syed, Afzal Pasha and Selevsek, Nathalie and van Nimwegen, Erik and Jaskiewicz, Lukasz and Aebersold, Ruedi and Zavolan, Mihaela. (2013) Timescales and bottlenecks in miRNA-dependent gene regulation. Molecular systems biology, Vol. 9 , 711.
Glatter, Timo and Ludwig, Christina and Ahrné, Erik and Aebersold, Ruedi and Heck, Albert J. R. and Schmidt, Alexander. (2012) Large-Scale Quantitative Assessment of Different In-Solution Protein Digestion Protocols Reveals Superior Cleavage Efficiency of Tandem Lys-C/Trypsin Proteolysis over Trypsin Digestion. Journal of proteome research, Vol. 11, H. 11. S. 5145-5156.
Marguerat, Samuel and Schmidt, Alexander and Codlin, Sandra and Chen, Wei and Aebersold, Ruedi and Bähler, Jürg. (2012) Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells. Cell, Vol. 151, H. 3. S. 671-683.
Cima, Igor and Schiess, Ralph and Wild, Peter and Kaelin, Martin and Schüffler, Peter and Lange, Vinzenz and Picotti, Paola and Ossola, Reto and Templeton, Arnoud and Schubert, Olga and Fuchs, Thomas and Leippold, Thomas and Wyler, Stephen and Zehetner, Jens and Jochum, Wolfram and Buhmann, Joachim and Cerny, Thomas and Moch, Holger and Gillessen, Silke and Aebersold, Ruedi and Krek, Wilhelm. (2011) Cancer genetics-guided discovery of serum biomarker signatures for diagnosis and prognosis of prostate cancer. Proceedings of the National Academy of Sciences of the United States of America, Vol. 108, H. 8. S. 3342-3347.
Glatter, Timo and Schittenhelm, Ralf B. and Rinner, Oliver and Roguska, Katarzyna and Wepf, Alexander and Jünger, Martin A. and Köhler, Katja and Jevtov, Irena and Choi, Hyungwon and Schmidt, Alexander and Nesvizhskii, Alexey I. and Stocker, Hugo and Hafen, Ernst and Aebersold, Ruedi and Gstaiger, Matthias. (2011) Modularity and hormone sensitivity of the Drosophila melanogaster insulin receptor/target of rapamycin interaction proteome. Molecular Systems Biology, Vol. 7 , 547.
Beck, Martin and Schmidt, Alexander and Malmstroem, Johan and Claassen, Manfred and Ori, Alessandro and Szymborska, Anna and Herzog, Franz and Rinner, Oliver and Ellenberg, Jan and Aebersold, Ruedi. (2011) The quantitative proteome of a human cell line. Molecular Systems Biology, Vol. 7 , 549.
Rinner, Oliver and Seebacher, Jan and Walzthoeni, Thomas and Mueller, Lukas N. and Beck, Martin and Schmidt, Alexander and Mueller, Markus and Aebersold, Ruedi. (2008) Identification of cross-linked peptides from large sequence databases. Nature methods, 5 (4). pp. 315-318.